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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000255:173593..175694- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011140-T1 ID=ATCC10864_011140-T1|Name=ATCC10864_011140-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2102bp|location=Sequence derived from alignment at MCQH01000255:173593..175694- (Aspergillus niger ATCC 10864)
ATGGCCGGCGTGAACCGGTCCTTTAGTTACAGTCGCGGCGACGATGCGTT
GTTGAGAGATGATGAGCGAGAGATTTCACCCCTCCGATCCGCAGAAGACG
GTCTCTACAGTACATCGTATGGCGACGTCTCTCCGCTATCTGCTGGGGTT
CAAGCGCAGAATCGGCCATTCGACCGAGGTCTGGTGTCAGTCCCGGAGGG
TCAGACCCTGGAGCGCCACATGACCTCTACGCCGGGGATGGATAATCTAG
GGCCGGCCTCTGTGGGTGGCGGAATCAGTGGTATCGCTCTTGGCGTGGCC
AATTCTCATAATCGCCAGAGTGGAGTTGACGCTTTTAGGGAAACAGATGT
GCCAGTACGCAATCTCCCCGCAGAACGGGATTTCAACACCACCGGCTCCG
ATAACCCCTATATACCTGCTCCGCCAGATGGAGACATATATCCCAGTTCA
GAGGCGGTGAGGTATCGCGACTCTTACAGCTCGCATACCGGGCTTGGTGC
TGGCGCGCCTTTTGCCGAACATAGCACGCCGGGCACGACGCCATCCCAAC
GTAGTTTCTTCGATAGTCCGTACCAAGGCGTGGATGCTGGACCGTACCAG
CGGCACTCGGCTTATAGTTCTCACGACTACCCGCTGGTCATCAATCCGGA
TGACATTGCTGACGACGGCGATGATGGTTTCCCAGTCCACCCGAAGGGAG
CAGCGGACTACAGATCGAACGCTAACGTACCTGGTACAGGTGTCGCCGGC
GCAGCGGCTGCTGGGGGGTTTCTTGGGAAATTTCGGGCGCTGTTTAAGAG
AGAAGAACCTAGTCCCTTCTACGATTCAGACATTGGAGGTGGTCTGGGAG
GAGCCGAAAAGGCACAAGGCGGTAGGCACATTATTGGAGGAGGCAGCCGT
AAGCGCGGTTGGATTGTTGGGCTCATATTGGCGGCGGTTATCGTGGCAGC
TATTGTTGGGGGCGCTGTCGGCGGTATTCTGGGCCATCAGGAACACGACG
GTGATACATCGTCGTCGTCATCATCATCATCATCAGGCACAGGGTCTGGT
GGTTCGGACAAAGGTGATGGGTTGCTTGACAAGGATTCCGACGAGATCAA
AGCACTCATGAACAACAAGAACCTCCACAAAGTGTTTCCTGGTGTCGACT
ATACCCCGTGGGGAGTGCAGTATCCACTGTGCCTCCAATATCCTCCGTCG
CAGAATAACGTTACGCGCGACCTGGCGGTGCTTACGCAGTTGACTAATAC
TATCAGGCTCTACGGCACCGACTGCAATCAGACCGAAATGGTCCTCGAGG
CTATTGACCGCTTGCAGTTGACTAATATGAAGCTCTGGCTGGGCGTGTGG
ATTGATACCAATACAACGACTACGGATCGCCAGATCAGCCAATTGTATAA
GATCGTGGAAAATGCGAACGACACCTCTATTTTCAAAGGAGCTATTGTCG
GTAATGAAGCCCTCTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAAACG
AATCTGATCGGCTACATTAACGATGTCAAAGACCACTTCAAAGACAAGAA
TATTGACCTCCCAGTGGGCACCTCAGACTTGGGCGACAATTGGAATGCAC
AGCTAGTCAGCGCGGCCGACTTTGTCATGTCGAACATTCATCCGTTCTTC
GGAGGAGTAGAGATTGACGACGCTGCCAGCTGGACATGGACGTTTTGGCA
GACGCATGACACCCCACTCACAGCGGGAATGAACAAACAGCAGATCATAT
CAGAGGTGGGATGGCCGACGGGAGGAGGGAACGACTGTGGGTCCGACAAC
AAGTGTCAGAATGACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCTGAA
CCAGTTCCTGTCGGAGTGGGTTTGTCAGGCTTTGGACAATGGTACAGAGT
ACTTCTGGTATGTTCGCAGATATCCTCATTGGTAAGACTCGGCTAAAACA
TGCGCAGGTTTGAAGCTTTCGATGAGCCGTGGAAGGTCCAGTACAACACG
CCCGGTCAGGAGTGGGAAGACAAATGGGGGCTGATGGACTCGGCTCGCAA
TCTGAAGCCGGGCGTCAAGATCCCCGATTGTGGCGGCAAGACGATTACGT
GA back to topCoding sequence (CDS) from alignment at MCQH01000255:173593..175694- >ATCC10864_011140-T1 ID=ATCC10864_011140-T1|Name=ATCC10864_011140-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4104bp|location=Sequence derived from alignment at MCQH01000255:173593..175694- (Aspergillus niger ATCC 10864)
GTTTGAAGCTTTCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGGTC
AGGAGTGGGAAGACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGAAG
CCGGGCGTCAAGATCCCCGATTGTGGCGGCAAGACGATTACGTGAATGGC
CGGCGTGAACCGGTCCTTTAGTTACAGTCGCGGCGACGATGCGTTGTTGA
GAGATGATGAGCGAGAGATTTCACCCCTCCGATCCGCAGAAGACGGTCTC
TACAGTACATCGTATGGCGACGTCTCTCCGCTATCTGCTGGGGTTCAAGC
GCAGAATCGGCCATTCGACCGAGGTCTGGTGTCAGTCCCGGAGGGTCAGA
CCCTGGAGCGCCACATGACCTCTACGCCGGGGATGGATAATCTAGGGCCG
GCCTCTGTGGGTGGCGGAATCAGTGGTATCGCTCTTGGCGTGGCCAATTC
TCATAATCGCCAGAGTGGAGTTGACGCTTTTAGGGAAACAGATGTGCCAG
TACGCAATCTCCCCGCAGAACGGGATTTCAACACCACCGGCTCCGATAAC
CCCTATATACCTGCTCCGCCAGATGGAGACATATATCCCAGTTCAGAGGC
GGTGAGGTATCGCGACTCTTACAGCTCGCATACCGGGCTTGGTGCTGGCG
CGCCTTTTGCCGAACATAGCACGCCGGGCACGACGCCATCCCAACGTAGT
TTCTTCGATAGTCCGTACCAAGGCGTGGATGCTGGACCGTACCAGCGGCA
CTCGGCTTATAGTTCTCACGACTACCCGCTGGTCATCAATCCGGATGACA
TTGCTGACGACGGCGATGATGGTTTCCCAGTCCACCCGAAGGGAGCAGCG
GACTACAGATCGAACGCTAACGTACCTGGTACAGGTGTCGCCGGCGCAGC
GGCTGCTGGGGGGTTTCTTGGGAAATTTCGGGCGCTGTTTAAGAGAGAAG
AACCTAGTCCCTTCTACGATTCAGACATTGGAGGTGGTCTGGGAGGAGCC
GAAAAGGCACAAGGCGGTAGGCACATTATTGGAGGAGGCAGCCGTAAGCG
CGGTTGGATTGTTGGGCTCATATTGGCGGCGGTTATCGTGGCAGCTATTG
TTGGGGGCGCTGTCGGCGGTATTCTGGGCCATCAGGAACACGACGGTGAT
ACATCGTCGTCGTCATCATCATCATCATCAGGCACAGGGTCTGGTGGTTC
GGACAAAGGTGATGGGTTGCTTGACAAGGATTCCGACGAGATCAAAGCAC
TCATGAACAACAAGAACCTCCACAAAGTGTTTCCTGGTGTCGACTATACC
CCGTGGGGAGTGCAGTATCCACTGTGCCTCCAATATCCTCCGTCGCAGAA
TAACGTTACGCGCGACCTGGCGGTGCTTACGCAGTTGACTAATACTATCA
GGCTCTACGGCACCGACTGCAATCAGACCGAAATGGTCCTCGAGGCTATT
GACCGCTTGCAGTTGACTAATATGAAGCTCTGGCTGGGCGTGTGGATTGA
TACCAATACAACGACTACGGATCGCCAGATCAGCCAATTGTATAAGATCG
TGGAAAATGCGAACGACACCTCTATTTTCAAAGGAGCTATTGTCGGTAAT
GAAGCCCTCTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAAACGAATCT
GATCGGCTACATTAACGATGTCAAAGACCACTTCAAAGACAAGAATATTG
ACCTCCCAGTGGGCACCTCAGACTTGGGCGACAATTGGAATGCACAGCTA
GTCAGCGCGGCCGACTTTGTCATGTCGAACATTCATCCGTTCTTCGGAGG
AGTAGAGATTGACGACGCTGCCAGCTGGACATGGACGTTTTGGCAGACGC
ATGACACCCCACTCACAGCGGGAATGAACAAACAGCAGATCATATCAGAG
GTGGGATGGCCGACGGGAGGAGGGAACGACTGTGGGTCCGACAACAAGTG
TCAGAATGACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCTGAACCAGT
TCCTGTCGGAGTGGGTTTGTCAGGCTTTGGACAATGGTACAGAGTACTTC
TGGTTTGAAGCTTTCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGG
TCAGGAGTGGGAAGACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGA
AGCCGGGCGTCAAGATCCCCGATTGTGGCGGCAAGACGATTACGTGAATG
GCCGGCGTGAACCGGTCCTTTAGTTACAGTCGCGGCGACGATGCGTTGTT
GAGAGATGATGAGCGAGAGATTTCACCCCTCCGATCCGCAGAAGACGGTC
TCTACAGTACATCGTATGGCGACGTCTCTCCGCTATCTGCTGGGGTTCAA
GCGCAGAATCGGCCATTCGACCGAGGTCTGGTGTCAGTCCCGGAGGGTCA
GACCCTGGAGCGCCACATGACCTCTACGCCGGGGATGGATAATCTAGGGC
CGGCCTCTGTGGGTGGCGGAATCAGTGGTATCGCTCTTGGCGTGGCCAAT
TCTCATAATCGCCAGAGTGGAGTTGACGCTTTTAGGGAAACAGATGTGCC
AGTACGCAATCTCCCCGCAGAACGGGATTTCAACACCACCGGCTCCGATA
ACCCCTATATACCTGCTCCGCCAGATGGAGACATATATCCCAGTTCAGAG
GCGGTGAGGTATCGCGACTCTTACAGCTCGCATACCGGGCTTGGTGCTGG
CGCGCCTTTTGCCGAACATAGCACGCCGGGCACGACGCCATCCCAACGTA
GTTTCTTCGATAGTCCGTACCAAGGCGTGGATGCTGGACCGTACCAGCGG
CACTCGGCTTATAGTTCTCACGACTACCCGCTGGTCATCAATCCGGATGA
CATTGCTGACGACGGCGATGATGGTTTCCCAGTCCACCCGAAGGGAGCAG
CGGACTACAGATCGAACGCTAACGTACCTGGTACAGGTGTCGCCGGCGCA
GCGGCTGCTGGGGGGTTTCTTGGGAAATTTCGGGCGCTGTTTAAGAGAGA
AGAACCTAGTCCCTTCTACGATTCAGACATTGGAGGTGGTCTGGGAGGAG
CCGAAAAGGCACAAGGCGGTAGGCACATTATTGGAGGAGGCAGCCGTAAG
CGCGGTTGGATTGTTGGGCTCATATTGGCGGCGGTTATCGTGGCAGCTAT
TGTTGGGGGCGCTGTCGGCGGTATTCTGGGCCATCAGGAACACGACGGTG
ATACATCGTCGTCGTCATCATCATCATCATCAGGCACAGGGTCTGGTGGT
TCGGACAAAGGTGATGGGTTGCTTGACAAGGATTCCGACGAGATCAAAGC
ACTCATGAACAACAAGAACCTCCACAAAGTGTTTCCTGGTGTCGACTATA
CCCCGTGGGGAGTGCAGTATCCACTGTGCCTCCAATATCCTCCGTCGCAG
AATAACGTTACGCGCGACCTGGCGGTGCTTACGCAGTTGACTAATACTAT
CAGGCTCTACGGCACCGACTGCAATCAGACCGAAATGGTCCTCGAGGCTA
TTGACCGCTTGCAGTTGACTAATATGAAGCTCTGGCTGGGCGTGTGGATT
GATACCAATACAACGACTACGGATCGCCAGATCAGCCAATTGTATAAGAT
CGTGGAAAATGCGAACGACACCTCTATTTTCAAAGGAGCTATTGTCGGTA
ATGAAGCCCTCTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAAACGAAT
CTGATCGGCTACATTAACGATGTCAAAGACCACTTCAAAGACAAGAATAT
TGACCTCCCAGTGGGCACCTCAGACTTGGGCGACAATTGGAATGCACAGC
TAGTCAGCGCGGCCGACTTTGTCATGTCGAACATTCATCCGTTCTTCGGA
GGAGTAGAGATTGACGACGCTGCCAGCTGGACATGGACGTTTTGGCAGAC
GCATGACACCCCACTCACAGCGGGAATGAACAAACAGCAGATCATATCAG
AGGTGGGATGGCCGACGGGAGGAGGGAACGACTGTGGGTCCGACAACAAG
TGTCAGAATGACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCTGAACCA
GTTCCTGTCGGAGTGGGTTTGTCAGGCTTTGGACAATGGTACAGAGTACT
TCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR017853 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH17 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000255 | supercontig | MCQH01000255:173593..175694 - |
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