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ATCC10864_011151-T1, ATCC10864_011151-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011151-T1
Unique NameATCC10864_011151-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:233468..234799+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011151-T1 ID=ATCC10864_011151-T1|Name=ATCC10864_011151-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1332bp|location=Sequence derived from alignment at MCQH01000255:233468..234799+ (Aspergillus niger ATCC 10864)
ATGGCACATGCCCGTAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTC
TAATGTGCAAGCCACTCAGTCTCAAGTAGCATCGCAGACGACACGGAATA
GTGCCAATCAGTTTTACGATCCGGATCAAGACCACCGAGAAAGGCGACAA
GTTCGTAAGGGCCTGAGAGATTTGACGCGGGACCTCAACGGTAAGGCCGA
CTCGAGCTCTTCAACTTGCCGCCGAGTCTGACATAATTTATGGTAGACTC
TAGAAATGAATATCTACAGTCCGGAAATCAGGGCCTGCGTGACACCATCA
AGAAAGCGAACGAGATCTTTGAGAATGTCAAGCAGACTTCTGACGCAACC
ATCGATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTCATACAAAAAGAC
GGCACAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAGATGTGGACGAGT
TTGTCTCGAAGTGTATCTCTTTTATGCGCCGGGCACCTGCGGATTCCCAA
GATTCGATGCCTTCCAGCACCCAACGGCGGCGGACGGGTATCGGAAGGAC
TCAAATGGACCCCAACGACAGCGACGAGGACCAAGGGGATGCGATGAACT
GGGACTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAATGCCCGACCATCA
GTTCCTGGCTTCCTACTGGGACCGCTTTCGGTACAGAAGCGCGTCCGACA
GCAACCTGTACGAAGAGCCCGTGAACGAATTGACCCAGCACGGGCCGTTG
CACCGCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAAGAAACATCGAAT
TTGACTACTATGTGTGCCAGCATCAATCGGCTTTTGGCAAGAACCCAAAA
CAACGGACAGGACGTGGTAGAGGCAGAATTGTCGCAGTTATCCGAGGAGC
CCGACGAAGATACGGTGCAAGAGGTGATGGCGAGGAACAATGTAGCCGAT
GATGGAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCCAAATTCTTTCGG
ACAAAGTGTAGAGAATCTATTCTACGTTAGCTTTTTGGTCCGGGATGGCT
TGGTTGGAATCGCAGTGGATAGCCGGGGCCTGCCCACTTTGCGTAAGTCC
TATTCAGTACCCTCGATGATGTGGGCATCTAATTGACCATCCTCAACCAG
ATTCTGCAAAGCCTCATGCGCCTAGTGAAGCCCAGAGATTGGGCATCAAG
AAGCGTCAGGCCATTTTCACACTCGACTTTGAGACTTGGCAAGAATTGGT
CCAAGTCTATGACATCAAGGACCCCATCATTCCTCATCGGGAGGAAGAGA
CGCAAAATACAGCACAATCCTGGCAAGGATAA
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Coding sequence (CDS) from alignment at MCQH01000255:233468..234799+

>ATCC10864_011151-T1 ID=ATCC10864_011151-T1|Name=ATCC10864_011151-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3654bp|location=Sequence derived from alignment at MCQH01000255:233468..234799+ (Aspergillus niger ATCC 10864)
ATGGCACATGCCCGTAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTC
TAATGTGCAAGCCACTCAGTCTCAAGTAGCATCGCAGACGACACGGAATA
GTGCCAATCAGTTTTACGATCCGGATCAAGACCACCGAGAAAGGCGACAA
GTTCGTAAGGGCCTGAGAGATTTGACGCGGGACCTCAACGACTCTAGAAA
TGAATATCTACAGTCCGGAAATCAGGGCCTGCGTGACACCATCAAGAAAG
CGAACGAGATCTTTGAGAATGTCAAGCAGACTTCTGACGCAACCATCGAT
TCACGGTTGCTTGTTCAAGCGGCAGATCTCTCATACAAAAAGACGGCACA
GTTGGTGCTGGGAGACGCCAGTGCAGGAATAGATGTGGACGAGTTTGTCT
CGAAGTGTATCTCTTTTATGCGCCGGGCACCTGCGGATTCCCAAGATTCG
ATGCCTTCCAGCACCCAACGGCGGCGGACGGGTATCGGAAGGACTCAAAT
GGACCCCAACGACAGCGACGAGGACCAAGGGGATGCGATGAACTGGGACT
GGCTCGGACGCGCTGCTTGTTTCTGTAGTAATGCCCGACCATCAGTTCCT
GGCTTCCTACTGGGACCGCTTTCGGTACAGAAGCGCGTCCGACAGCAACC
TGTACGAAGAGCCCGTGAACGAATTGACCCAGCACGGGCCGTTGCACCGC
AAGAGCTGCAGGAAAAGGACCTGGACAGGCAAGAAACATCGAATTTGACT
ACTATGTGTGCCAGCATCAATCGGCTTTTGGCAAGAACCCAAAACAACGG
ACAGGACGTGGTAGAGGCAGAATTGTCGCAGTTATCCGAGGAGCCCGACG
AAGATACGGTGCAAGAGGTGATGGCGAGGAACAATGTAGCCGATGATGGA
GGTGTTCCTCTGTTCCAGTTCTGCATCAACCCAAATTCTTTCGGACAAAG
TGTAGAGAATCTATTCTACGTTAGCTTTTTGGTCCGGGATGGCTTGGTTG
GAATCGCAGTGGATAGCCGGGGCCTGCCCACTTTGCATTCTGCAAAGCCT
CATGCGCCTAGTGAAGCCCAGAGATTGGGCATCAAGAAGCGTCAGGCCAT
TTTCACACTCGACTTTGAGACTTGGCAAGAATTGGTCCAAGTCTATGACA
TCAAGGACCCCATCATTCCTCATCGGGAGGAAGAGACGCAAAATACAGCA
CAATCCTGGCAAGGATAAATGGCACATGCCCGTAGAGCTAAGCGAGCTCG
ACTATCAACAAGAGACTCTAATGTGCAAGCCACTCAGTCTCAAGTAGCAT
CGCAGACGACACGGAATAGTGCCAATCAGTTTTACGATCCGGATCAAGAC
CACCGAGAAAGGCGACAAGTTCGTAAGGGCCTGAGAGATTTGACGCGGGA
CCTCAACGACTCTAGAAATGAATATCTACAGTCCGGAAATCAGGGCCTGC
GTGACACCATCAAGAAAGCGAACGAGATCTTTGAGAATGTCAAGCAGACT
TCTGACGCAACCATCGATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTC
ATACAAAAAGACGGCACAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAG
ATGTGGACGAGTTTGTCTCGAAGTGTATCTCTTTTATGCGCCGGGCACCT
GCGGATTCCCAAGATTCGATGCCTTCCAGCACCCAACGGCGGCGGACGGG
TATCGGAAGGACTCAAATGGACCCCAACGACAGCGACGAGGACCAAGGGG
ATGCGATGAACTGGGACTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAAT
GCCCGACCATCAGTTCCTGGCTTCCTACTGGGACCGCTTTCGGTACAGAA
GCGCGTCCGACAGCAACCTGTACGAAGAGCCCGTGAACGAATTGACCCAG
CACGGGCCGTTGCACCGCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAA
GAAACATCGAATTTGACTACTATGTGTGCCAGCATCAATCGGCTTTTGGC
AAGAACCCAAAACAACGGACAGGACGTGGTAGAGGCAGAATTGTCGCAGT
TATCCGAGGAGCCCGACGAAGATACGGTGCAAGAGGTGATGGCGAGGAAC
AATGTAGCCGATGATGGAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCC
AAATTCTTTCGGACAAAGTGTAGAGAATCTATTCTACGTTAGCTTTTTGG
TCCGGGATGGCTTGGTTGGAATCGCAGTGGATAGCCGGGGCCTGCCCACT
TTGCATTCTGCAAAGCCTCATGCGCCTAGTGAAGCCCAGAGATTGGGCAT
CAAGAAGCGTCAGGCCATTTTCACACTCGACTTTGAGACTTGGCAAGAAT
TGGTCCAAGTCTATGACATCAAGGACCCCATCATTCCTCATCGGGAGGAA
GAGACGCAAAATACAGCACAATCCTGGCAAGGATAAATGGCACATGCCCG
TAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTCTAATGTGCAAGCCA
CTCAGTCTCAAGTAGCATCGCAGACGACACGGAATAGTGCCAATCAGTTT
TACGATCCGGATCAAGACCACCGAGAAAGGCGACAAGTTCGTAAGGGCCT
GAGAGATTTGACGCGGGACCTCAACGACTCTAGAAATGAATATCTACAGT
CCGGAAATCAGGGCCTGCGTGACACCATCAAGAAAGCGAACGAGATCTTT
GAGAATGTCAAGCAGACTTCTGACGCAACCATCGATTCACGGTTGCTTGT
TCAAGCGGCAGATCTCTCATACAAAAAGACGGCACAGTTGGTGCTGGGAG
ACGCCAGTGCAGGAATAGATGTGGACGAGTTTGTCTCGAAGTGTATCTCT
TTTATGCGCCGGGCACCTGCGGATTCCCAAGATTCGATGCCTTCCAGCAC
CCAACGGCGGCGGACGGGTATCGGAAGGACTCAAATGGACCCCAACGACA
GCGACGAGGACCAAGGGGATGCGATGAACTGGGACTGGCTCGGACGCGCT
GCTTGTTTCTGTAGTAATGCCCGACCATCAGTTCCTGGCTTCCTACTGGG
ACCGCTTTCGGTACAGAAGCGCGTCCGACAGCAACCTGTACGAAGAGCCC
GTGAACGAATTGACCCAGCACGGGCCGTTGCACCGCAAGAGCTGCAGGAA
AAGGACCTGGACAGGCAAGAAACATCGAATTTGACTACTATGTGTGCCAG
CATCAATCGGCTTTTGGCAAGAACCCAAAACAACGGACAGGACGTGGTAG
AGGCAGAATTGTCGCAGTTATCCGAGGAGCCCGACGAAGATACGGTGCAA
GAGGTGATGGCGAGGAACAATGTAGCCGATGATGGAGGTGTTCCTCTGTT
CCAGTTCTGCATCAACCCAAATTCTTTCGGACAAAGTGTAGAGAATCTAT
TCTACGTTAGCTTTTTGGTCCGGGATGGCTTGGTTGGAATCGCAGTGGAT
AGCCGGGGCCTGCCCACTTTGCATTCTGCAAAGCCTCATGCGCCTAGTGA
AGCCCAGAGATTGGGCATCAAGAAGCGTCAGGCCATTTTCACACTCGACT
TTGAGACTTGGCAAGAATTGGTCCAAGTCTATGACATCAAGGACCCCATC
ATTCCTCATCGGGAGGAAGAGACGCAAAATACAGCACAATCCTGGCAAGG
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0030915Smc5-Smc6 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011151ATCC10864_011151Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011151-T1.exon1ATCC10864_011151-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011151-T1.exon2ATCC10864_011151-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011151-T1.exon3ATCC10864_011151-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011151-T1.cdsATCC10864_011151-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011151-T1ATCC10864_011151-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014854
PFAMPF08743
InterProIPR029225
InterProIPR027786
PFAMPF15412
Properties
Property NameValue
NoteBUSCO:EOG092634ZL
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:233468..234799 +
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