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ATCC10864_011210-T1, ATCC10864_011210-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011210-T1
Unique NameATCC10864_011210-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000263:124950..126520+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011210-T1 ID=ATCC10864_011210-T1|Name=ATCC10864_011210-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1571bp|location=Sequence derived from alignment at MCQH01000263:124950..126520+ (Aspergillus niger ATCC 10864)
ATGTTTGGCTTCGACATCGAATTCCGCCGTCACCGGTGGGCCTTGATCTA
CTGTTCCATCTCCGCCATCGGCGCCCTGGTATTTGGCTATGACAACACAT
ATTACAGCGGGATTCTAGGCATGCAAGAATTCAAGAATGACTACGGCGAC
CATTACGAGGATGGGGCGAAAGCATTGGCGACGAGCTTTACTTCGCTGAC
TACCTCAAGCATCTACATCGGAGATATGCTCGGTGCACTCATTGCAGGGC
CCCTCAATGATCGCTTTGGTCGGAAAACGGTCCTCTGGATTGCTTCGGCG
TTTGTGCTCGCAGGGGGTGTGACCCAGGTCGCGGACACGAACATTGAGGG
TGTTATTGTACTTGGCCGCATTCTGATCGGGCTTGGAGTGGGCAACTTTA
CGGTTACGTCGCTACTCTAGTGAGTGCTGTTGTGTCGGTTCTACACAAAT
GTAAAACACCATTGACCATCCATAGTATCGGAGAAATCGCACCAATGGAG
ATACGAAGTCCAGCACTGTACATGTACCAATTCCTGCAGTCCTGCTCGCA
GCTCGTCGCTTCCGGCCTCACCCAAGGCACCAATTCCATCCACTCGTCTC
TATCTTACAAACTCCCAATGGGCGGACTCGTCATCCTGCCCCTCTTCATG
CTCTTCCTCTTACCCTTCATCCCCGAAAGCCCAACCTGGTATGTCTTCCA
CAACAGACTGGAGGACGCCCGACGCTCCCTCCTCAAAATCAACCGCAACA
ACCGCACCTACGACCCCAGAGCCGATCTAGCCTTCCTCACGCAAGCCCGA
CGCTACGAAGAAGCCCAAGGCGAAGAATCTTCCTGGCTTTCCCTCCTCCT
CGACCCCATCGAACGGAAAAAGCTAATATGGGCCTCGGGCGGCATGTACG
CCCAACAAATCTGCGGCATCATTTTCTTCTACAACTACGGCGTCGTGTTT
GCTGAAGCTCTCGGCGTGTCCCAGCCCTTTACAATCACCCTCATCACCAT
GATCCTACAGATCTTCGCTGTCGCCGTATCCATCCTCACAGGCAACCGTC
TCCGCCGCCGCACCAACCTCCTCGCCAGCACCAGCCTCATCCTGGTCGCC
TTCATTATTATCGGCGGCCTCGGCACCCAATCCACTCTCACCACAGCATC
CAAATACATCATTGTCGTCTTCTCCTACGTCGTCATCTGTGCATACAACT
TCGGTCTCGGCCCACTCACCTACGCCGTGTCCCGCGAAATATCGGTCGGC
GTGAACCAGAATAAGATCATGTCGGTGTCCATCGTGGCGCTGTATTTCTT
CCTTTGGGTGATCTCCTTCACCGCGCCGTATCTGTATTATGATGCCGGTC
TGGGTCCAATGGTCGGGTTCGTGTATGCGGGTACAACGCTGACGTCGCTG
ATTTGGGTGTGGTTTTGTGTGGGTGAGACGCAGGGACGAACGAGGTTGGA
GGTCGCTATGTTTTTTACGGAGAGGGTACCGGCGCGGAGGTGGAGGACGC
ATGTTTTCGCGGGGAGCGGAGGGGATGAGAAGGACGATGTGAGGGCGGAG
CATGTTGAAAATAAGGCTTAG
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Coding sequence (CDS) from alignment at MCQH01000263:124950..126520+

>ATCC10864_011210-T1 ID=ATCC10864_011210-T1|Name=ATCC10864_011210-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3030bp|location=Sequence derived from alignment at MCQH01000263:124950..126520+ (Aspergillus niger ATCC 10864)
ATGTTTGGCTTCGACATCGAATTCCGCCGTCACCGGTGGGCCTTGATCTA
CTGTTCCATCTCCGCCATCGGCGCCCTGGTATTTGGCTATGACAACACAT
ATTACAGCGGGATTCTAGGCATGCAAGAATTCAAGAATGACTACGGCGAC
CATTACGAGGATGGGGCGAAAGCATTGGCGACGAGCTTTACTTCGCTGAC
TACCTCAAGCATCTACATCGGAGATATGCTCGGTGCACTCATTGCAGGGC
CCCTCAATGATCGCTTTGGTCGGAAAACGGTCCTCTGGATTGCTTCGGCG
TTTGTGCTCGCAGGGGGTGTGACCCAGGTCGCGGACACGAACATTGAGGG
TGTTATTGTACTTGGCCGCATTCTGATCGGGCTTGGAGTGGGCAACTTTA
CGGTTACGTCGCTACTCTATATCGGAGAAATCGCACCAATGGAGATACGA
AGTCCAGCACTGTACATGTACCAATTCCTGCAGTCCTGCTCGCAGCTCGT
CGCTTCCGGCCTCACCCAAGGCACCAATTCCATCCACTCGTCTCTATCTT
ACAAACTCCCAATGGGCGGACTCGTCATCCTGCCCCTCTTCATGCTCTTC
CTCTTACCCTTCATCCCCGAAAGCCCAACCTGGTATGTCTTCCACAACAG
ACTGGAGGACGCCCGACGCTCCCTCCTCAAAATCAACCGCAACAACCGCA
CCTACGACCCCAGAGCCGATCTAGCCTTCCTCACGCAAGCCCGACGCTAC
GAAGAAGCCCAAGGCGAAGAATCTTCCTGGCTTTCCCTCCTCCTCGACCC
CATCGAACGGAAAAAGCTAATATGGGCCTCGGGCGGCATGTACGCCCAAC
AAATCTGCGGCATCATTTTCTTCTACAACTACGGCGTCGTGTTTGCTGAA
GCTCTCGGCGTGTCCCAGCCCTTTACAATCACCCTCATCACCATGATCCT
ACAGATCTTCGCTGTCGCCGTATCCATCCTCACAGGCAACCGTCTCCGCC
GCCGCACCAACCTCCTCGCCAGCACCAGCCTCATCCTGGTCGCCTTCATT
ATTATCGGCGGCCTCGGCACCCAATCCACTCTCACCACAGCATCCAAATA
CATCATTGTCGTCTTCTCCTACGTCGTCATCTGTGCATACAACTTCGGTC
TCGGCCCACTCACCTACGCCGTGTCCCGCGAAATATCGGTCGGCGTGAAC
CAGAATAAGATCATGTCGGTGTCCATCGTGGCGCTGTATTTCTTCCTTTG
GGTGATCTCCTTCACCGCGCCGTATCTGTATTATGATGCCGGTCTGGGTC
CAATGGTCGGGTTCGTGTATGCGGGTACAACGCTGACGTCGCTGATTTGG
GTGTGGTTTTGTGTGGGTGAGACGCAGGGACGAACGAGGTTGGAGGTCGC
TATGTTTTTTACGGAGAGGGTACCGGCGCGGAGGTGGAGGACGCATGTTT
TCGCGGGGAGCGGAGGGGATGAGAAGGACGATGTGAGGGCGGAGCATGTT
GAAAATAAGGCTTAGATGTTTGGCTTCGACATCGAATTCCGCCGTCACCG
GTGGGCCTTGATCTACTGTTCCATCTCCGCCATCGGCGCCCTGGTATTTG
GCTATGACAACACATATTACAGCGGGATTCTAGGCATGCAAGAATTCAAG
AATGACTACGGCGACCATTACGAGGATGGGGCGAAAGCATTGGCGACGAG
CTTTACTTCGCTGACTACCTCAAGCATCTACATCGGAGATATGCTCGGTG
CACTCATTGCAGGGCCCCTCAATGATCGCTTTGGTCGGAAAACGGTCCTC
TGGATTGCTTCGGCGTTTGTGCTCGCAGGGGGTGTGACCCAGGTCGCGGA
CACGAACATTGAGGGTGTTATTGTACTTGGCCGCATTCTGATCGGGCTTG
GAGTGGGCAACTTTACGGTTACGTCGCTACTCTATATCGGAGAAATCGCA
CCAATGGAGATACGAAGTCCAGCACTGTACATGTACCAATTCCTGCAGTC
CTGCTCGCAGCTCGTCGCTTCCGGCCTCACCCAAGGCACCAATTCCATCC
ACTCGTCTCTATCTTACAAACTCCCAATGGGCGGACTCGTCATCCTGCCC
CTCTTCATGCTCTTCCTCTTACCCTTCATCCCCGAAAGCCCAACCTGGTA
TGTCTTCCACAACAGACTGGAGGACGCCCGACGCTCCCTCCTCAAAATCA
ACCGCAACAACCGCACCTACGACCCCAGAGCCGATCTAGCCTTCCTCACG
CAAGCCCGACGCTACGAAGAAGCCCAAGGCGAAGAATCTTCCTGGCTTTC
CCTCCTCCTCGACCCCATCGAACGGAAAAAGCTAATATGGGCCTCGGGCG
GCATGTACGCCCAACAAATCTGCGGCATCATTTTCTTCTACAACTACGGC
GTCGTGTTTGCTGAAGCTCTCGGCGTGTCCCAGCCCTTTACAATCACCCT
CATCACCATGATCCTACAGATCTTCGCTGTCGCCGTATCCATCCTCACAG
GCAACCGTCTCCGCCGCCGCACCAACCTCCTCGCCAGCACCAGCCTCATC
CTGGTCGCCTTCATTATTATCGGCGGCCTCGGCACCCAATCCACTCTCAC
CACAGCATCCAAATACATCATTGTCGTCTTCTCCTACGTCGTCATCTGTG
CATACAACTTCGGTCTCGGCCCACTCACCTACGCCGTGTCCCGCGAAATA
TCGGTCGGCGTGAACCAGAATAAGATCATGTCGGTGTCCATCGTGGCGCT
GTATTTCTTCCTTTGGGTGATCTCCTTCACCGCGCCGTATCTGTATTATG
ATGCCGGTCTGGGTCCAATGGTCGGGTTCGTGTATGCGGGTACAACGCTG
ACGTCGCTGATTTGGGTGTGGTTTTGTGTGGGTGAGACGCAGGGACGAAC
GAGGTTGGAGGTCGCTATGTTTTTTACGGAGAGGGTACCGGCGCGGAGGT
GGAGGACGCATGTTTTCGCGGGGAGCGGAGGGGATGAGAAGGACGATGTG
AGGGCGGAGCATGTTGAAAATAAGGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011210ATCC10864_011210Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011210-T1.exon1ATCC10864_011210-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011210-T1.exon2ATCC10864_011210-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011210-T1.cdsATCC10864_011210-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011210-T1ATCC10864_011210-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
InterProIPR005829
Properties
Property NameValue
NoteSMCOG1169:sugar transport protein
NoteantiSMASH:Cluster_1000263.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000263supercontigMCQH01000263:124950..126520 +
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