You are here

Home

ATCC10864_011211-T1, ATCC10864_011211-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011211-T1
Unique NameATCC10864_011211-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000263:128625..129979-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011211-T1 ID=ATCC10864_011211-T1|Name=ATCC10864_011211-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1355bp|location=Sequence derived from alignment at MCQH01000263:128625..129979- (Aspergillus niger ATCC 10864)
ATGTCATCTTCCAACAGTCAAGCTCCACGGACTCTTGCTCCAGCTACTGT
CATTAGTCCCCTTGCCAATAATTCCGTTCAAGAAACTGTCGTCAAGCCAA
TCCGAAAAAGAACAAATGCCTGTGAAGCATGCAAGAAGAGGAAAACAAAA
GTATAACTTTAAATAAGTCTGTCTTGAAGATATCTAACTGAGAACCACTT
TACAGTGTCTAGGAGAGCTTCCGTGTGATAAATGTCTTCAAATAGGCACA
GAATGTCATTTCGTGGAAGAATCTGATAGACGAAGAAAGCTTGCACTGCG
CCGTATCGAACAGGAACTGAGCTCAGCCTACTTGTTACTCGATCAAATCA
GAGTGGCTTATGGAAAAGGTAACGAGATAGAACTTGAAAGACTCATTAAC
ATATCAAAGGATAAGTCGCCTCTGGCTCAGAGGATTGAAGTTCAAACGCA
GCAGAAACTGCAGGTACGACACAATCTATTTAAGAATCCACAAGGGCAGG
CTGACCAAAATACCAGAATCTCGAAGAACGTATGTCCTTTTATAAACAGT
TAGTCGAGGAGCTATCCACTAATTTCCATTCGGAGGTCTCTGGCTACATA
GCGAATTCATTGAAGGTGAACCTTTACTCTGAACATCCTGATAAAGCATC
TAAACTTAGTACTAGTCTCTTACGTCGAGATCCCATGCTTTGAAAGAGCC
TCAAAGATCTCGTTCTATTTCATCCTCTTCGTCGATGGGCTCGCTTGACG
ATATTGATACTGTTGATATTGATGTGAACAGAGACAGGCAAAGCAGATCA
ACAGGGTTCGTGGGAAAAGGTTCTGAGATTGCTTGGCTCCAGAGACTTCA
CGCTGAAGTTGGCGGCTTAGAACGTCCCGGTACCGAGCAGCACGTCAAGC
ATGATAAAGGAAGTCTCGCTTCTCTCAATTATCACCTCGATAATCTGGTT
ATAGCAGAACCAAGTTATAGTGATCTCAATGCAATGCCACCAAAGCCTTG
GGCTGACCAACTGCTTCACACTTACTTTTCATTCATACACCCAACATTCC
CACTTCTTCTCAAACCTTTGTTTTACCAGCAGTACGAGAATGCTTTCCGT
AATCGCTTGTCAGCCCCTCAGCAAAGCTGGCTCGTGATCTTCAACCTAGT
CAACGCTATTGGAGCTAAACATTTTCAGTTGCGCCAAGAGCACTGGGACG
AAGATGTTGATGATCGTATCTTCCTTTCAAGGGCCATTGCACTCAATGCA
AAGCATAATACGATTTTGGACTATGTGGACTTACAACAGGTCCAAATAAG
GATGCTTCTAGCACTCTATTATCTCGTTGCTGGTCAAATTAATCGGTACG
CCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000263:128625..129979-

>ATCC10864_011211-T1 ID=ATCC10864_011211-T1|Name=ATCC10864_011211-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3294bp|location=Sequence derived from alignment at MCQH01000263:128625..129979- (Aspergillus niger ATCC 10864)
TCTCTTACGTCGAGATCCCATGCTTTGAAAGAGCCTCAAAGATCTCGTTC
TATTTCATCCTCTTCGTCGATGGGCTCGCTTGACGATATTGATACTGTTG
ATATTGATGTGAACAGAGACAGGCAAAGCAGATCAACAGGGTTCGTGGGA
AAAGGTTCTGAGATTGCTTGGCTCCAGAGACTTCACGCTGAAGTTGGCGG
CTTAGAACGTCCCGGTACCGAGCAGCACGTCAAGCATGATAAAGGAAGTC
TCGCTTCTCTCAATTATCACCTCGATAATCTGGTTATAGCAGAACCAAGT
TATAGTGATCTCAATGCAATGCCACCAAAGCCTTGGGCTGACCAACTGCT
TCACACTTACTTTTCATTCATACACCCAACATTCCCACTTCTTCTCAAAC
CTTTGTTTTACCAGCAGTACGAGAATGCTTTCCGTAATCGCTTGTCAGCC
CCTCAGCAAAGCTGGCTCGTGATCTTCAACCTAGTCAACGCTATTGGAGC
TAAACATTTTCAGTTGCGCCAAGAGCACTGGGACGAAGATGTTGATGATC
GTATCTTCCTTTCAAGGGCCATTGCACTCAATGCAAAGCATAATACGATT
TTGGACTATGTGGACTTACAACAGGTCCAAATAAGGATGCTTCTAGCACT
CTATTATCTCGTTGCTGGTCAAATTAATCGGTACGCCTGATGTCTAGGAG
AGCTTCCGTGTGATAAATGTCTTCAAATAGGCACAGAATGTCATTTCGTG
GAAGAATCTGATAGACGAAGAAAGCTTGCACTGCGCCGTATCGAACAGGA
ACTGAGCTCAGCCTACTTGTTACTCGATCAAATCAGAGTGGCTTATGGAA
AAGGTAACGAGATAGAACTTGAAAGACTCATTAACATATCAAAGGATAAG
TCGCCTCTGGCTCAGAGGATTGAAGTTCAAACGCAGCAGAAACTGCAGAT
GTCATCTTCCAACAGTCAAGCTCCACGGACTCTTGCTCCAGCTACTGTCA
TTAGTCCCCTTGCCAATAATTCCGTTCAAGAAACTGTCGTCAAGCCAATC
CGAAAAAGAACAAATGCCTGTGAAGCATGCAAGAAGAGGAAAACAAAATC
TCTTACGTCGAGATCCCATGCTTTGAAAGAGCCTCAAAGATCTCGTTCTA
TTTCATCCTCTTCGTCGATGGGCTCGCTTGACGATATTGATACTGTTGAT
ATTGATGTGAACAGAGACAGGCAAAGCAGATCAACAGGGTTCGTGGGAAA
AGGTTCTGAGATTGCTTGGCTCCAGAGACTTCACGCTGAAGTTGGCGGCT
TAGAACGTCCCGGTACCGAGCAGCACGTCAAGCATGATAAAGGAAGTCTC
GCTTCTCTCAATTATCACCTCGATAATCTGGTTATAGCAGAACCAAGTTA
TAGTGATCTCAATGCAATGCCACCAAAGCCTTGGGCTGACCAACTGCTTC
ACACTTACTTTTCATTCATACACCCAACATTCCCACTTCTTCTCAAACCT
TTGTTTTACCAGCAGTACGAGAATGCTTTCCGTAATCGCTTGTCAGCCCC
TCAGCAAAGCTGGCTCGTGATCTTCAACCTAGTCAACGCTATTGGAGCTA
AACATTTTCAGTTGCGCCAAGAGCACTGGGACGAAGATGTTGATGATCGT
ATCTTCCTTTCAAGGGCCATTGCACTCAATGCAAAGCATAATACGATTTT
GGACTATGTGGACTTACAACAGGTCCAAATAAGGATGCTTCTAGCACTCT
ATTATCTCGTTGCTGGTCAAATTAATCGGTACGCCTGATGTCTAGGAGAG
CTTCCGTGTGATAAATGTCTTCAAATAGGCACAGAATGTCATTTCGTGGA
AGAATCTGATAGACGAAGAAAGCTTGCACTGCGCCGTATCGAACAGGAAC
TGAGCTCAGCCTACTTGTTACTCGATCAAATCAGAGTGGCTTATGGAAAA
GGTAACGAGATAGAACTTGAAAGACTCATTAACATATCAAAGGATAAGTC
GCCTCTGGCTCAGAGGATTGAAGTTCAAACGCAGCAGAAACTGCAGATGT
CATCTTCCAACAGTCAAGCTCCACGGACTCTTGCTCCAGCTACTGTCATT
AGTCCCCTTGCCAATAATTCCGTTCAAGAAACTGTCGTCAAGCCAATCCG
AAAAAGAACAAATGCCTGTGAAGCATGCAAGAAGAGGAAAACAAAATCTC
TTACGTCGAGATCCCATGCTTTGAAAGAGCCTCAAAGATCTCGTTCTATT
TCATCCTCTTCGTCGATGGGCTCGCTTGACGATATTGATACTGTTGATAT
TGATGTGAACAGAGACAGGCAAAGCAGATCAACAGGGTTCGTGGGAAAAG
GTTCTGAGATTGCTTGGCTCCAGAGACTTCACGCTGAAGTTGGCGGCTTA
GAACGTCCCGGTACCGAGCAGCACGTCAAGCATGATAAAGGAAGTCTCGC
TTCTCTCAATTATCACCTCGATAATCTGGTTATAGCAGAACCAAGTTATA
GTGATCTCAATGCAATGCCACCAAAGCCTTGGGCTGACCAACTGCTTCAC
ACTTACTTTTCATTCATACACCCAACATTCCCACTTCTTCTCAAACCTTT
GTTTTACCAGCAGTACGAGAATGCTTTCCGTAATCGCTTGTCAGCCCCTC
AGCAAAGCTGGCTCGTGATCTTCAACCTAGTCAACGCTATTGGAGCTAAA
CATTTTCAGTTGCGCCAAGAGCACTGGGACGAAGATGTTGATGATCGTAT
CTTCCTTTCAAGGGCCATTGCACTCAATGCAAAGCATAATACGATTTTGG
ACTATGTGGACTTACAACAGGTCCAAATAAGGATGCTTCTAGCACTCTAT
TATCTCGTTGCTGGTCAAATTAATCGGTACGCCTGATGTCTAGGAGAGCT
TCCGTGTGATAAATGTCTTCAAATAGGCACAGAATGTCATTTCGTGGAAG
AATCTGATAGACGAAGAAAGCTTGCACTGCGCCGTATCGAACAGGAACTG
AGCTCAGCCTACTTGTTACTCGATCAAATCAGAGTGGCTTATGGAAAAGG
TAACGAGATAGAACTTGAAAGACTCATTAACATATCAAAGGATAAGTCGC
CTCTGGCTCAGAGGATTGAAGTTCAAACGCAGCAGAAACTGCAGATGTCA
TCTTCCAACAGTCAAGCTCCACGGACTCTTGCTCCAGCTACTGTCATTAG
TCCCCTTGCCAATAATTCCGTTCAAGAAACTGTCGTCAAGCCAATCCGAA
AAAGAACAAATGCCTGTGAAGCATGCAAGAAGAGGAAAACAAAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011211ATCC10864_011211Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011211-T1ATCC10864_011211-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011211-T1.cdsATCC10864_011211-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011211-T1.exon3ATCC10864_011211-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011211-T1.exon2ATCC10864_011211-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011211-T1.exon1ATCC10864_011211-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
NoteantiSMASH:Cluster_1000263.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000263supercontigMCQH01000263:128625..129979 -
Powered by Drupal