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ATCC10864_011246-T1, ATCC10864_011246-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011246-T1
Unique NameATCC10864_011246-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000265:48116..48829-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011246-T1 ID=ATCC10864_011246-T1|Name=ATCC10864_011246-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=714bp|location=Sequence derived from alignment at MCQH01000265:48116..48829- (Aspergillus niger ATCC 10864)
ATGTCAGATCGCGAATTTAGTGGTAAGTTCTTTGCCAGATTACTTCCTGG
CGCGATATTATGATGTCAAGCTAACTTGCGATTTTCCTAGCGAACGACGA
CTTGTCGCTACCTAAAGGTATGTCGCCTTCCGCCGTGTTGTCGCGTCGCA
TCGACTCCCCCACTTTTGAGGGCAGTGGGACTCGTCGCCCTTTGCTTTGC
CTCCCTCGGACTCAATATAAAATATAATCAAATATCCATCATATACTAAA
TCGCAAACCATACTCACAGCGACGGTCCAAAAGATCATCACCGAGATCCT
ACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCA
TGGAATGCTGCGTTGAATTCATCACTTTGATCTCTTCCGAAGCAAACGAT
ATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCG
CGCCCTCCGTGATCTCGGTTTCAGCGACTACATCCCCGATGTCCTTGCTG
TCGCGGAGGAACACAAAGAGCAGTTGAAGGTATGTGGCTGTTACCATTAC
CTCTTTTGTGGCATTGTCCGGCTAACATGGATCGGTTACACTAGTCGCGA
GAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCT
TCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACG
CTGCTCCGGAGTGA
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Coding sequence (CDS) from alignment at MCQH01000265:48116..48829-

>ATCC10864_011246-T1 ID=ATCC10864_011246-T1|Name=ATCC10864_011246-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1716bp|location=Sequence derived from alignment at MCQH01000265:48116..48829- (Aspergillus niger ATCC 10864)
TCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGA
GGAGCTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGT
ATCACGCTGCTCCGGAGTGACGACGGTCCAAAAGATCATCACCGAGATCC
TACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTC
ATGGAATGCTGCGTTGAATTCATCACTTTGATCTCTTCCGAAGCAAACGA
TATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGC
GCGCCCTCCGTGATCTCGGTTTCAGCGACTACATCCCCGATGTCCTTGCT
GTCGCGGAGGAACACAAAGAGCAGTTGAAGCGAACGACGACTTGTCGCTA
CCTAAAGATGTCAGATCGCGAATTTAGTGTCGCGAGAGAAGAAGCAGAGC
AAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCTTCTACGGCAGCAACA
GGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACGCTGCTCCGGAGTGAC
GACGGTCCAAAAGATCATCACCGAGATCCTACCTCCTTCATCCGGCCAGA
CATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCGTTGAATTC
ATCACTTTGATCTCTTCCGAAGCAAACGATATCAGTGAAAAGGAAGCCAA
GAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGATCTCGGTT
TCAGCGACTACATCCCCGATGTCCTTGCTGTCGCGGAGGAACACAAAGAG
CAGTTGAAGCGAACGACGACTTGTCGCTACCTAAAGATGTCAGATCGCGA
ATTTAGTGTCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTG
TCCGAGGAGGAGCTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTAC
TGAGAAGTATCACGCTGCTCCGGAGTGACGACGGTCCAAAAGATCATCAC
CGAGATCCTACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCG
ATCTCCTCATGGAATGCTGCGTTGAATTCATCACTTTGATCTCTTCCGAA
GCAAACGATATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACA
TGTCGAGCGCGCCCTCCGTGATCTCGGTTTCAGCGACTACATCCCCGATG
TCCTTGCTGTCGCGGAGGAACACAAAGAGCAGTTGAAGCGAACGACGACT
TGTCGCTACCTAAAGATGTCAGATCGCGAATTTAGTGTCGCGAGAGAAGA
AGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCTTCTACGG
CAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACGCTGCTCC
GGAGTGACGACGGTCCAAAAGATCATCACCGAGATCCTACCTCCTTCATC
CGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCG
TTGAATTCATCACTTTGATCTCTTCCGAAGCAAACGATATCAGTGAAAAG
GAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGA
TCTCGGTTTCAGCGACTACATCCCCGATGTCCTTGCTGTCGCGGAGGAAC
ACAAAGAGCAGTTGAAGCGAACGACGACTTGTCGCTACCTAAAGATGTCA
GATCGCGAATTTAGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000122negative regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0017054negative cofactor 2 complex
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0140223general transcription initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011246ATCC10864_011246Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011246-T1ATCC10864_011246-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011246-T1.cdsATCC10864_011246-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011246-T1.exon4ATCC10864_011246-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011246-T1.exon3ATCC10864_011246-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011246-T1.exon2ATCC10864_011246-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011246-T1.exon1ATCC10864_011246-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR042225
PFAMPF00808
InterProIPR009072
PFAMPF00125
InterProIPR003958
Properties
Property NameValue
NoteantiSMASH:Cluster_1000265.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000265supercontigMCQH01000265:48116..48829 -
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