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ATCC10864_011247-T1, ATCC10864_011247-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011247-T1
Unique NameATCC10864_011247-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000265:49636..50621-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011247-T1 ID=ATCC10864_011247-T1|Name=ATCC10864_011247-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=986bp|location=Sequence derived from alignment at MCQH01000265:49636..50621- (Aspergillus niger ATCC 10864)
ATGTCCAAGACCATCATCGTTACCGGTGCCTCGAGAGGTAATCCTATCCA
GCCCGTCCACGATTCCATTGCAAACTCAACTCTACGAGCAAGCCACTGAT
CAGGCACACACAATCAGGAATCGGCCTCGCCATCACGAAATACCTCCTCA
CGGCACCCCAATCCCACAATGTTGTCGTGATCGCCCGCAGCCGTGAACCT
CTCGAGAAGCTTAAGGAGCAATACAGCAAGCAAGTCGAGGTGCTCAATGG
CGACCTGGCTGACTTCTCCATCGGTCAGAAGGCCGTGGACCTGGCTCTCA
GGTCCTTCGGTCGTCTGGACGGCATGGTCCTCAACCACGGCATGCTTGGA
CAAGTAGGCAAGGTCAAGGACGCGGATTTCGAGCAGTGGAAGCACGGATT
CGACGTGAACTTTATCAGTCTTGTTGCTTTTGTGAGTACGAGTCTTTCAA
ACTTATGGCGGATAGCGGTACATGACTGGGACCTGGATAGCTGACGCATT
GGGTGTTTGTTATCTGCTTAGATCAAGGCCGGTCTTCCCGCCCTCCGTGA
ATCCAAGGGAAAAATCATCTTCACTTCGTCGGGTGCTGCCGTCTCTGCCT
ACAGGGGCTGGGCTCTCTACGGTGCGACGAAGGCGGCCATGAACCATCTC
GCCTTGAGCTTGGGAGAGGAAGAACCCGAGGTTACTACAATTTCGATCAG
GCCTGGCATGGTTGACACCGAGATGCAGCGGGAGCTACGCGAGGACCATG
CTACGACCTTGGAGCCGCAGATGCATGCCAAGTTTACGACGGTCCACAAG
GAGGGCAAGCTCCTCAAGCCAGAGCAGCCGGGTCATGTTATGGCCAAGCT
GGTTTTGGACGCTCCTAACGAGCTTACTGGGAAGTTCTTCACGTGAGTGA
TTTGGAAAATTTCTTCATTTCAGGCAAAAAAGCTAACAGGTATAACTAGG
TGGAACGACAAGGCTCTGGAGGCATTCCAGGCGTAG
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Coding sequence (CDS) from alignment at MCQH01000265:49636..50621-

>ATCC10864_011247-T1 ID=ATCC10864_011247-T1|Name=ATCC10864_011247-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3036bp|location=Sequence derived from alignment at MCQH01000265:49636..50621- (Aspergillus niger ATCC 10864)
GTGGAACGACAAGGCTCTGGAGGCATTCCAGGCGTAGATCAAGGCCGGTC
TTCCCGCCCTCCGTGAATCCAAGGGAAAAATCATCTTCACTTCGTCGGGT
GCTGCCGTCTCTGCCTACAGGGGCTGGGCTCTCTACGGTGCGACGAAGGC
GGCCATGAACCATCTCGCCTTGAGCTTGGGAGAGGAAGAACCCGAGGTTA
CTACAATTTCGATCAGGCCTGGCATGGTTGACACCGAGATGCAGCGGGAG
CTACGCGAGGACCATGCTACGACCTTGGAGCCGCAGATGCATGCCAAGTT
TACGACGGTCCACAAGGAGGGCAAGCTCCTCAAGCCAGAGCAGCCGGGTC
ATGTTATGGCCAAGCTGGTTTTGGACGCTCCTAACGAGCTTACTGGGAAG
TTCTTCACGAATCGGCCTCGCCATCACGAAATACCTCCTCACGGCACCCC
AATCCCACAATGTTGTCGTGATCGCCCGCAGCCGTGAACCTCTCGAGAAG
CTTAAGGAGCAATACAGCAAGCAAGTCGAGGTGCTCAATGGCGACCTGGC
TGACTTCTCCATCGGTCAGAAGGCCGTGGACCTGGCTCTCAGGTCCTTCG
GTCGTCTGGACGGCATGGTCCTCAACCACGGCATGCTTGGACAAGTAGGC
AAGGTCAAGGACGCGGATTTCGAGCAGTGGAAGCACGGATTCGACGTGAA
CTTTATCAGTCTTGTTGCTTTTATGTCCAAGACCATCATCGTTACCGGTG
CCTCGAGAGGTGGAACGACAAGGCTCTGGAGGCATTCCAGGCGTAGATCA
AGGCCGGTCTTCCCGCCCTCCGTGAATCCAAGGGAAAAATCATCTTCACT
TCGTCGGGTGCTGCCGTCTCTGCCTACAGGGGCTGGGCTCTCTACGGTGC
GACGAAGGCGGCCATGAACCATCTCGCCTTGAGCTTGGGAGAGGAAGAAC
CCGAGGTTACTACAATTTCGATCAGGCCTGGCATGGTTGACACCGAGATG
CAGCGGGAGCTACGCGAGGACCATGCTACGACCTTGGAGCCGCAGATGCA
TGCCAAGTTTACGACGGTCCACAAGGAGGGCAAGCTCCTCAAGCCAGAGC
AGCCGGGTCATGTTATGGCCAAGCTGGTTTTGGACGCTCCTAACGAGCTT
ACTGGGAAGTTCTTCACGAATCGGCCTCGCCATCACGAAATACCTCCTCA
CGGCACCCCAATCCCACAATGTTGTCGTGATCGCCCGCAGCCGTGAACCT
CTCGAGAAGCTTAAGGAGCAATACAGCAAGCAAGTCGAGGTGCTCAATGG
CGACCTGGCTGACTTCTCCATCGGTCAGAAGGCCGTGGACCTGGCTCTCA
GGTCCTTCGGTCGTCTGGACGGCATGGTCCTCAACCACGGCATGCTTGGA
CAAGTAGGCAAGGTCAAGGACGCGGATTTCGAGCAGTGGAAGCACGGATT
CGACGTGAACTTTATCAGTCTTGTTGCTTTTATGTCCAAGACCATCATCG
TTACCGGTGCCTCGAGAGGTGGAACGACAAGGCTCTGGAGGCATTCCAGG
CGTAGATCAAGGCCGGTCTTCCCGCCCTCCGTGAATCCAAGGGAAAAATC
ATCTTCACTTCGTCGGGTGCTGCCGTCTCTGCCTACAGGGGCTGGGCTCT
CTACGGTGCGACGAAGGCGGCCATGAACCATCTCGCCTTGAGCTTGGGAG
AGGAAGAACCCGAGGTTACTACAATTTCGATCAGGCCTGGCATGGTTGAC
ACCGAGATGCAGCGGGAGCTACGCGAGGACCATGCTACGACCTTGGAGCC
GCAGATGCATGCCAAGTTTACGACGGTCCACAAGGAGGGCAAGCTCCTCA
AGCCAGAGCAGCCGGGTCATGTTATGGCCAAGCTGGTTTTGGACGCTCCT
AACGAGCTTACTGGGAAGTTCTTCACGAATCGGCCTCGCCATCACGAAAT
ACCTCCTCACGGCACCCCAATCCCACAATGTTGTCGTGATCGCCCGCAGC
CGTGAACCTCTCGAGAAGCTTAAGGAGCAATACAGCAAGCAAGTCGAGGT
GCTCAATGGCGACCTGGCTGACTTCTCCATCGGTCAGAAGGCCGTGGACC
TGGCTCTCAGGTCCTTCGGTCGTCTGGACGGCATGGTCCTCAACCACGGC
ATGCTTGGACAAGTAGGCAAGGTCAAGGACGCGGATTTCGAGCAGTGGAA
GCACGGATTCGACGTGAACTTTATCAGTCTTGTTGCTTTTATGTCCAAGA
CCATCATCGTTACCGGTGCCTCGAGAGGTGGAACGACAAGGCTCTGGAGG
CATTCCAGGCGTAGATCAAGGCCGGTCTTCCCGCCCTCCGTGAATCCAAG
GGAAAAATCATCTTCACTTCGTCGGGTGCTGCCGTCTCTGCCTACAGGGG
CTGGGCTCTCTACGGTGCGACGAAGGCGGCCATGAACCATCTCGCCTTGA
GCTTGGGAGAGGAAGAACCCGAGGTTACTACAATTTCGATCAGGCCTGGC
ATGGTTGACACCGAGATGCAGCGGGAGCTACGCGAGGACCATGCTACGAC
CTTGGAGCCGCAGATGCATGCCAAGTTTACGACGGTCCACAAGGAGGGCA
AGCTCCTCAAGCCAGAGCAGCCGGGTCATGTTATGGCCAAGCTGGTTTTG
GACGCTCCTAACGAGCTTACTGGGAAGTTCTTCACGAATCGGCCTCGCCA
TCACGAAATACCTCCTCACGGCACCCCAATCCCACAATGTTGTCGTGATC
GCCCGCAGCCGTGAACCTCTCGAGAAGCTTAAGGAGCAATACAGCAAGCA
AGTCGAGGTGCTCAATGGCGACCTGGCTGACTTCTCCATCGGTCAGAAGG
CCGTGGACCTGGCTCTCAGGTCCTTCGGTCGTCTGGACGGCATGGTCCTC
AACCACGGCATGCTTGGACAAGTAGGCAAGGTCAAGGACGCGGATTTCGA
GCAGTGGAAGCACGGATTCGACGTGAACTTTATCAGTCTTGTTGCTTTTA
TGTCCAAGACCATCATCGTTACCGGTGCCTCGAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011247ATCC10864_011247Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011247-T1ATCC10864_011247-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011247-T1.cdsATCC10864_011247-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011247-T1.exon4ATCC10864_011247-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011247-T1.exon3ATCC10864_011247-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011247-T1.exon2ATCC10864_011247-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011247-T1.exon1ATCC10864_011247-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08659
InterProIPR002347
PFAMPF00106
InterProIPR036291
InterProIPR020904
PFAMPF13561
Properties
Property NameValue
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
NoteantiSMASH:Cluster_1000265.1
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000265supercontigMCQH01000265:49636..50621 -
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