You are here

Home

ATCC10864_011298-T1, ATCC10864_011298-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011298-T1
Unique NameATCC10864_011298-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000270:41713..44792+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011298-T1 ID=ATCC10864_011298-T1|Name=ATCC10864_011298-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=3080bp|location=Sequence derived from alignment at MCQH01000270:41713..44792+ (Aspergillus niger ATCC 10864)
ATGGAGGAGGATGTCCGGTTGCCCACCTCAGAGCGGCTTGGCGGCCCCCA
TCTTGATCCCGATCAGTGTCCCTCGACCACTTGCTCCCTTAAGCTGCATC
AGGAGCTCCCGAAAAGCACGCGACCGCGTTTGGAGAAGCAGGCCTTGTCA
CCGTTTGCTCGTTTGCCTCGTACCGTCATCGAGCAGTAAGTGCACTTCCG
TCGTCCCAGAGCCGGCGCATCGCGCGAGCGACAATCATGTGATTGATGAT
ATCTGCTGCCTGTGCTCGGAAGCTTTTCTGATTTAATTGGCGCCTTAGTA
TCCTATATGTTGCGGATGCCAACACATTTGCGTCGCTAACACTGCTGAAT
CGAAAATGGCGACGCATATCGGACTCAACCATTTTGTATGCGCACCATCT
TTTCCAATGCCCGTCCTTTGCCTTGACGCAGAAGGCTACTGAGCAGCCCG
CTCACTCAAGTGATCTTATACTGCTCAAGCGGCAGTTCGGCGCGCAGGTC
AGGCGGAATGCATTCGATGCTTTTCTCCGGCCCCGCAGGACTCTCATCAA
GCTTACTTCGACTTCCATGAGCTCCTCGACGGCCTTCCCGCAAGGTGAAG
CATTTCGCTTTTCTTTCTCTCCAAATGCACAGCTTATCCTGTGCATCAGC
TCTTCCAGAATTGTGGTTCTCGATGTAACCGCGGATCTGGCGGTCGTGAA
ACACGAGCTCAAGACTTGGCGACGGCCTTTGAACGCTGCCATTGTTGATG
ATGGCTCCATTCTCGCTGTGGTTTCCTCTACTCACCGGGTCAATATTTAC
CGCCTTACCGATGATGAAGCGAAACACATTCAAGATTTGACATTGAACGA
CGTTCCTCGGACCCTAACGCTCTCCCCGACAGGGGGGGTCCTTGCCATTG
CGTACGATGATCGGATCGAAGTCTACGCCATCGGTGAAGGGGCACTGGCT
ACCGAGCGAAGAGCTGTGCGCTGCTCCGGAGTTGACTCGGTGTCGTTTTC
CTCTGATGGTGTCATGCTACTAGGGACTTCCGCTGATCGCGGTAATGGCG
GTCTTGTCACTATAACAGTGCCGTTCTACACAGAATCAGAAACTGAGTAT
TCCCCAAGGGATGCTCAGATCCGGATGTGGACAACACAGATTTTGTTTCC
AGACGTAACCACCGGGCTTAGCCATGCCTGTTTGCTCCCCTTGCACGCAG
AAGGTGAAGGCAATTGGCTACTAGGGTTTGATGAACAAATAAACACGTTT
CGAGCATTCGGGGTGCACAACACGAACTCAGGCACAGCATATTTCGTGAC
TCCGATGTCTGAGGATGGGTCCCGGGAGACATCTCCCATCATGCTACCCA
CTGTTGACGACCTCGGGGAGCTAGCTGCTATAGGGTTCGAGAGTTCTGGC
TTATGGGTATATGGTGTACCTGATCGTCTGGATATTGCTCCTGTAGCTCC
CAACGCAAGAACATATGCTGAAGTGGATGCTGAGCAGGGCCCTTCAATCG
AGGAAGCGGCTGCTGCCCGGGATAGCCTGTCCCGACTCCAGCAGACCATC
ACAAAGCCCAAAGTCCTAATCAATGGCCATAAGATGAGCGTTATGCCGGG
AATGACAGCAGCTTGCTGGGTACGCCACCCAAGCTGTGTGGCTGGCCGTC
GTAGATTGGTAGCCGTTGCTCCTGGTGGCGTTAGCCCTCCGACGATTGGC
GAAGAAGACGTGCCGGTAGATGGCGGACGTGTGCTGCTGTTAGACTTCGA
ACGATCTGCCACAAATGGTGACTCAACTGAAGTCAACATCGAGGTCGGTG
ATGCGGAGCCGAAGATCCTGAGTGAACCGAACTCTACCATAGATACCGAA
GTCGAGCTGGAGAGGAGAAGGACGCGATTACATCGTGGGAATACTACTTC
GCCTCGGGCACGCGCATTTGCTCGAGAATCCTATCCTTCGGCCAACTCGG
TCGTCCACGCACCTCGGCAAAATGTGCGCAGAAACAGCTCCTTCTTCTCG
GGCTCTTCGACTAGCGACATTCAGCACATTCCGGAATCACCGTATGACAA
CACGCAACCTCGATCTCGGGACACGTTGCGTCGTGCAGCCACGGCCGCGG
CTAGTGGTCGCGGACGCTATAACCCACGCTATCAAGACGAAGCACGCCCT
GTTCAAGGCCAAAGGCCAGCCTCACAGGCTTTCCAGGTCCCTCATGAGAG
CGACGCAGACAATTGGGTTCCACCGCCCCCTCCCTATTCTAGGGTCCCCG
ACGCACCGCTTCCCGATTATCTCCGAAGGACCCTCCTCCCTTCGCATACG
GAACCGGCCCGTAGAGTCGGTGATGTTCCAGAAGACATCCAGAGACCTCA
GACCAGTCGTCTGGAACAGATGGTCGACGAATCTACGTCCCGAAGCTCGC
TACAAAGATTGCATACCATTACTGGCTCACGGCTCGCGGCTCGCATGAGG
AGGGGCATGAGAGACTCCGAGTCCCCTGAACCGAACAGACGACATACCAT
GTTCTTTCGCAGAAGAGATTCTGCCACAGGACCCCAACCTAACGTCCACA
GCCTTGATGGAGCGCAGATGCCTGTGTCAGAGCAAGACCCTTCGGTCAAC
TTTCAGGGTCAACTGCACCCTGTCCTCAGCGGGTCTACACAGCTAAATCA
ATCGTCAGCAGTTCAACGAGCAAATTACCAGGACGTTTTGCTTGAGGAGT
CTTTACCTGACGCCCCGGACTGGCAGGAGGCTATGCCCCCGACACAGAAT
GGGACTTTCAATCTGGACCATTACCCATACTCCATCTCCTCGCCTAATCT
TCAGGTCTCGACCCTTCAACATGATGCCCCCGAGGCGGTGCATGGGAGTC
GACAACGTTCCACCTACTACCGAGGAGCAGATCGGCGCTCTCATCCTCAG
AATGTCCGGCTCCCGCCTGGGGGTATTCCACCGCTGAACCGCCGGGCATC
AACCGACCCCACACTATCTACCAGCTCACAAGCGGCTGCACATGATCTGT
GGCGGAGACGCATTGAAGAGTGGAACGAGCAGACCATCTACGAGAGAAGC
AAACGCAGAAGCAAATGTATAGTGATGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000270:41713..44792+

>ATCC10864_011298-T1 ID=ATCC10864_011298-T1|Name=ATCC10864_011298-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5934bp|location=Sequence derived from alignment at MCQH01000270:41713..44792+ (Aspergillus niger ATCC 10864)
ATGGAGGAGGATGTCCGGTTGCCCACCTCAGAGCGGCTTGGCGGCCCCCA
TCTTGATCCCGATCAGTGTCCCTCGACCACTTGCTCCCTTAAGCTGCATC
AGGAGCTCCCGAAAAGCACGCGACCGCGTTTGGAGAAGCAGGCCTTGTCA
CCGTTTGCTCGTTTGCCTCGTACCGTCATCGAGCATATCCTATATGTTGC
GGATGCCAACACATTTGCGTCGCTAACACTGCTGAATCGAAAATGGCGAC
GCATATCGGACTCAACCATTTTGTATGCGCACCATCTTTTCCAATGCCCG
TCCTTTGCCTTGACGCAGAAGGCTACTGAGCAGCCCGCTCACTCAAGTGA
TCTTATACTGCTCAAGCGGCAGTTCGGCGCGCAGGTCAGGCGGAATGCAT
TCGATGCTTTTCTCCGGCCCCGCAGGACTCTCATCAAGCTTACTTCGACT
TCCATGAGCTCCTCGACGGCCTTCCCGCAAGGTGAAGCATTTCGCTTTTC
TTTCTCTCCAAATGCACAGCTTATCCTGTGCATCAGCTCTTCCAGAATTG
TGGTTCTCGATGTAACCGCGGATCTGGCGGTCGTGAAACACGAGCTCAAG
ACTTGGCGACGGCCTTTGAACGCTGCCATTGTTGATGATGGCTCCATTCT
CGCTGTGGTTTCCTCTACTCACCGGGTCAATATTTACCGCCTTACCGATG
ATGAAGCGAAACACATTCAAGATTTGACATTGAACGACGTTCCTCGGACC
CTAACGCTCTCCCCGACAGGGGGGGTCCTTGCCATTGCGTACGATGATCG
GATCGAAGTCTACGCCATCGGTGAAGGGGCACTGGCTACCGAGCGAAGAG
CTGTGCGCTGCTCCGGAGTTGACTCGGTGTCGTTTTCCTCTGATGGTGTC
ATGCTACTAGGGACTTCCGCTGATCGCGGTAATGGCGGTCTTGTCACTAT
AACAGTGCCGTTCTACACAGAATCAGAAACTGAGTATTCCCCAAGGGATG
CTCAGATCCGGATGTGGACAACACAGATTTTGTTTCCAGACGTAACCACC
GGGCTTAGCCATGCCTGTTTGCTCCCCTTGCACGCAGAAGGTGAAGGCAA
TTGGCTACTAGGGTTTGATGAACAAATAAACACGTTTCGAGCATTCGGGG
TGCACAACACGAACTCAGGCACAGCATATTTCGTGACTCCGATGTCTGAG
GATGGGTCCCGGGAGACATCTCCCATCATGCTACCCACTGTTGACGACCT
CGGGGAGCTAGCTGCTATAGGGTTCGAGAGTTCTGGCTTATGGGTATATG
GTGTACCTGATCGTCTGGATATTGCTCCTGTAGCTCCCAACGCAAGAACA
TATGCTGAAGTGGATGCTGAGCAGGGCCCTTCAATCGAGGAAGCGGCTGC
TGCCCGGGATAGCCTGTCCCGACTCCAGCAGACCATCACAAAGCCCAAAG
TCCTAATCAATGGCCATAAGATGAGCGTTATGCCGGGAATGACAGCAGCT
TGCTGGGTACGCCACCCAAGCTGTGTGGCTGGCCGTCGTAGATTGGTAGC
CGTTGCTCCTGGTGGCGTTAGCCCTCCGACGATTGGCGAAGAAGACGTGC
CGGTAGATGGCGGACGTGTGCTGCTGTTAGACTTCGAACGATCTGCCACA
AATGGTGACTCAACTGAAGTCAACATCGAGGTCGGTGATGCGGAGCCGAA
GATCCTGAGTGAACCGAACTCTACCATAGATACCGAAGTCGAGCTGGAGA
GGAGAAGGACGCGATTACATCGTGGGAATACTACTTCGCCTCGGGCACGC
GCATTTGCTCGAGAATCCTATCCTTCGGCCAACTCGGTCGTCCACGCACC
TCGGCAAAATGTGCGCAGAAACAGCTCCTTCTTCTCGGGCTCTTCGACTA
GCGACATTCAGCACATTCCGGAATCACCGTATGACAACACGCAACCTCGA
TCTCGGGACACGTTGCGTCGTGCAGCCACGGCCGCGGCTAGTGGTCGCGG
ACGCTATAACCCACGCTATCAAGACGAAGCACGCCCTGTTCAAGGCCAAA
GGCCAGCCTCACAGGCTTTCCAGGTCCCTCATGAGAGCGACGCAGACAAT
TGGGTTCCACCGCCCCCTCCCTATTCTAGGGTCCCCGACGCACCGCTTCC
CGATTATCTCCGAAGGACCCTCCTCCCTTCGCATACGGAACCGGCCCGTA
GAGTCGGTGATGTTCCAGAAGACATCCAGAGACCTCAGACCAGTCGTCTG
GAACAGATGGTCGACGAATCTACGTCCCGAAGCTCGCTACAAAGATTGCA
TACCATTACTGGCTCACGGCTCGCGGCTCGCATGAGGAGGGGCATGAGAG
ACTCCGAGTCCCCTGAACCGAACAGACGACATACCATGTTCTTTCGCAGA
AGAGATTCTGCCACAGGACCCCAACCTAACGTCCACAGCCTTGATGGAGC
GCAGATGCCTGTGTCAGAGCAAGACCCTTCGGTCAACTTTCAGGGTCAAC
TGCACCCTGTCCTCAGCGGGTCTACACAGCTAAATCAATCGTCAGCAGTT
CAACGAGCAAATTACCAGGACGTTTTGCTTGAGGAGTCTTTACCTGACGC
CCCGGACTGGCAGGAGGCTATGCCCCCGACACAGAATGGGACTTTCAATC
TGGACCATTACCCATACTCCATCTCCTCGCCTAATCTTCAGGTCTCGACC
CTTCAACATGATGCCCCCGAGGCGGTGCATGGGAGTCGACAACGTTCCAC
CTACTACCGAGGAGCAGATCGGCGCTCTCATCCTCAGAATGTCCGGCTCC
CGCCTGGGGGTATTCCACCGCTGAACCGCCGGGCATCAACCGACCCCACA
CTATCTACCAGCTCACAAGCGGCTGCACATGATCTGTGGCGGAGACGCAT
TGAAGAGTGGAACGAGCAGACCATCTACGAGAGAAGCAAACGCAGAAGCA
AATGTATAGTGATGTAGATGGAGGAGGATGTCCGGTTGCCCACCTCAGAG
CGGCTTGGCGGCCCCCATCTTGATCCCGATCAGTGTCCCTCGACCACTTG
CTCCCTTAAGCTGCATCAGGAGCTCCCGAAAAGCACGCGACCGCGTTTGG
AGAAGCAGGCCTTGTCACCGTTTGCTCGTTTGCCTCGTACCGTCATCGAG
CATATCCTATATGTTGCGGATGCCAACACATTTGCGTCGCTAACACTGCT
GAATCGAAAATGGCGACGCATATCGGACTCAACCATTTTGTATGCGCACC
ATCTTTTCCAATGCCCGTCCTTTGCCTTGACGCAGAAGGCTACTGAGCAG
CCCGCTCACTCAAGTGATCTTATACTGCTCAAGCGGCAGTTCGGCGCGCA
GGTCAGGCGGAATGCATTCGATGCTTTTCTCCGGCCCCGCAGGACTCTCA
TCAAGCTTACTTCGACTTCCATGAGCTCCTCGACGGCCTTCCCGCAAGGT
GAAGCATTTCGCTTTTCTTTCTCTCCAAATGCACAGCTTATCCTGTGCAT
CAGCTCTTCCAGAATTGTGGTTCTCGATGTAACCGCGGATCTGGCGGTCG
TGAAACACGAGCTCAAGACTTGGCGACGGCCTTTGAACGCTGCCATTGTT
GATGATGGCTCCATTCTCGCTGTGGTTTCCTCTACTCACCGGGTCAATAT
TTACCGCCTTACCGATGATGAAGCGAAACACATTCAAGATTTGACATTGA
ACGACGTTCCTCGGACCCTAACGCTCTCCCCGACAGGGGGGGTCCTTGCC
ATTGCGTACGATGATCGGATCGAAGTCTACGCCATCGGTGAAGGGGCACT
GGCTACCGAGCGAAGAGCTGTGCGCTGCTCCGGAGTTGACTCGGTGTCGT
TTTCCTCTGATGGTGTCATGCTACTAGGGACTTCCGCTGATCGCGGTAAT
GGCGGTCTTGTCACTATAACAGTGCCGTTCTACACAGAATCAGAAACTGA
GTATTCCCCAAGGGATGCTCAGATCCGGATGTGGACAACACAGATTTTGT
TTCCAGACGTAACCACCGGGCTTAGCCATGCCTGTTTGCTCCCCTTGCAC
GCAGAAGGTGAAGGCAATTGGCTACTAGGGTTTGATGAACAAATAAACAC
GTTTCGAGCATTCGGGGTGCACAACACGAACTCAGGCACAGCATATTTCG
TGACTCCGATGTCTGAGGATGGGTCCCGGGAGACATCTCCCATCATGCTA
CCCACTGTTGACGACCTCGGGGAGCTAGCTGCTATAGGGTTCGAGAGTTC
TGGCTTATGGGTATATGGTGTACCTGATCGTCTGGATATTGCTCCTGTAG
CTCCCAACGCAAGAACATATGCTGAAGTGGATGCTGAGCAGGGCCCTTCA
ATCGAGGAAGCGGCTGCTGCCCGGGATAGCCTGTCCCGACTCCAGCAGAC
CATCACAAAGCCCAAAGTCCTAATCAATGGCCATAAGATGAGCGTTATGC
CGGGAATGACAGCAGCTTGCTGGGTACGCCACCCAAGCTGTGTGGCTGGC
CGTCGTAGATTGGTAGCCGTTGCTCCTGGTGGCGTTAGCCCTCCGACGAT
TGGCGAAGAAGACGTGCCGGTAGATGGCGGACGTGTGCTGCTGTTAGACT
TCGAACGATCTGCCACAAATGGTGACTCAACTGAAGTCAACATCGAGGTC
GGTGATGCGGAGCCGAAGATCCTGAGTGAACCGAACTCTACCATAGATAC
CGAAGTCGAGCTGGAGAGGAGAAGGACGCGATTACATCGTGGGAATACTA
CTTCGCCTCGGGCACGCGCATTTGCTCGAGAATCCTATCCTTCGGCCAAC
TCGGTCGTCCACGCACCTCGGCAAAATGTGCGCAGAAACAGCTCCTTCTT
CTCGGGCTCTTCGACTAGCGACATTCAGCACATTCCGGAATCACCGTATG
ACAACACGCAACCTCGATCTCGGGACACGTTGCGTCGTGCAGCCACGGCC
GCGGCTAGTGGTCGCGGACGCTATAACCCACGCTATCAAGACGAAGCACG
CCCTGTTCAAGGCCAAAGGCCAGCCTCACAGGCTTTCCAGGTCCCTCATG
AGAGCGACGCAGACAATTGGGTTCCACCGCCCCCTCCCTATTCTAGGGTC
CCCGACGCACCGCTTCCCGATTATCTCCGAAGGACCCTCCTCCCTTCGCA
TACGGAACCGGCCCGTAGAGTCGGTGATGTTCCAGAAGACATCCAGAGAC
CTCAGACCAGTCGTCTGGAACAGATGGTCGACGAATCTACGTCCCGAAGC
TCGCTACAAAGATTGCATACCATTACTGGCTCACGGCTCGCGGCTCGCAT
GAGGAGGGGCATGAGAGACTCCGAGTCCCCTGAACCGAACAGACGACATA
CCATGTTCTTTCGCAGAAGAGATTCTGCCACAGGACCCCAACCTAACGTC
CACAGCCTTGATGGAGCGCAGATGCCTGTGTCAGAGCAAGACCCTTCGGT
CAACTTTCAGGGTCAACTGCACCCTGTCCTCAGCGGGTCTACACAGCTAA
ATCAATCGTCAGCAGTTCAACGAGCAAATTACCAGGACGTTTTGCTTGAG
GAGTCTTTACCTGACGCCCCGGACTGGCAGGAGGCTATGCCCCCGACACA
GAATGGGACTTTCAATCTGGACCATTACCCATACTCCATCTCCTCGCCTA
ATCTTCAGGTCTCGACCCTTCAACATGATGCCCCCGAGGCGGTGCATGGG
AGTCGACAACGTTCCACCTACTACCGAGGAGCAGATCGGCGCTCTCATCC
TCAGAATGTCCGGCTCCCGCCTGGGGGTATTCCACCGCTGAACCGCCGGG
CATCAACCGACCCCACACTATCTACCAGCTCACAAGCGGCTGCACATGAT
CTGTGGCGGAGACGCATTGAAGAGTGGAACGAGCAGACCATCTACGAGAG
AAGCAAACGCAGAAGCAAATGTATAGTGATGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011298ATCC10864_011298Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011298-T1.exon1ATCC10864_011298-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011298-T1.exon2ATCC10864_011298-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011298-T1.cdsATCC10864_011298-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011298-T1ATCC10864_011298-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR001810
InterProIPR036047
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000270supercontigMCQH01000270:41713..44792 +
Powered by Drupal