You are here

Home

ATCC10864_011361-T1, ATCC10864_011361-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011361-T1
Unique NameATCC10864_011361-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:91473..92977+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011361-T1 ID=ATCC10864_011361-T1|Name=ATCC10864_011361-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1505bp|location=Sequence derived from alignment at MCQH01000282:91473..92977+ (Aspergillus niger ATCC 10864)
ATGTCTACTCCCCTCGACAAGACCGCCCCGATCGCCATTGTTGGCGCGGG
CGTGTTCGGCCTCTCCAGCGCCATCCATCTGGTCCGGAGAGGGTATCGCA
ACGTCACCGTCTTTGACCGTCAGCCCTACCACGAGACGCTCTACGACTTT
GACCGTGGCTGTGATGCAGCATCTGCAGGTATTCTCACAGCACCAAAAGT
ATGTTCCCCTACTAATGACAATTTGTAGACTGCAACAAGATCATCCGGGC
CGCCTACGGCCACGAAACATGGTACCAGAACTTCACGCTCGAAGCAATCA
AAGCATGGGAGACATGGAACGAGTCTCTTGCCAAGGGAAGCACTCTTCCC
CCGGGAATGACTAGCAAGGAACGCATCTATGTCAACTGCGGCAACTACCA
TTTCGGCGACCACGGCGACGCAGCCGGCCTGAACCCCTTCGAAAAGGCTT
CAGTAGAGAACCTGACCAAAGCAGGCCTCGGACACACTCAGTACCTGTTT
GCCTCCAACCCGCAAGAGGCGACCCGAGCCAAGGTAGATGGCTACGGCTA
CGCTGTCGACCCCTTCCACCTATCGCGCGACGGACAACAACCAAGCGGGT
ACCTCGACATGATCGGGGGATTCGTCTACGCAGACAAGGCATGTCGCTAC
GCACTTCACCTAGCGCAGCAACTAGGTGTCAAGCTCATCTTAGATCGACA
AGCCGGTCGCTTCGAGGGTTTGCTCGAATCCAATGGTGAGGTAACCGGGA
TCCGCACCGCAGATGGCAAACACCACACCGCCGCCCTGACCATCCTCGCC
TGCGGCGGATGGACACCTACCCTCGTCCCAGAGATGGACGGGCTCTGCGA
AACCACCGCGGGATCCGTGGCGATGATCCAAATCCCAGAGGGTTCTCCAC
TCCGCCAACGATTCTCGGCATCCAACTTCCCGGTCTTCCAATGGAACGTG
CGCAGCGGGGAGAATGGCAACCTGTACGGCTTCCCTCTGGATGACCGGGG
GGTGCTGAAGATCGGATACCGCGGAACGAAATACACGCATCCCCAGGTGC
AGTTAGATGGACAGGTGCGCAGTGCCCCGATCACCAAGTGGACGGCCCCG
TCTGTGTCCGGGTTACCGGAGAAGTCTGTCTCGGTGATTCAGGGGTTCTT
GGATCGGTATTTACCCGAGTTGAAAGAGGCGGGGATCGGGATTTCGCAGA
CGCGATTATGCTGGTACACAGATTCGTATGATAATCACTGGGTGATTGAT
CGGGTGCCTGGGAAGAAGGGGGTGATGGTAGCTACGGGGGGGAGTGGACA
TGGGTTCAAATTCCTACCGGTGTTGGGACAGTTGGTGGTGGATCGCGTGG
AGGAAGTGCAATCGGAGCTACTGGAGCTGGTCAAGTGGCGGAAGTTGGGA
GCTGGGGAGAAGGGGTCGAACGAGTTGATGAGAGGGTTCAAGGATGGAAA
TGCGTTGCAGAAGGTGAAGTTGGTGAGTGAGCCAGGGAGGGAGAGTCGGC
TGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000282:91473..92977+

>ATCC10864_011361-T1 ID=ATCC10864_011361-T1|Name=ATCC10864_011361-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2910bp|location=Sequence derived from alignment at MCQH01000282:91473..92977+ (Aspergillus niger ATCC 10864)
ATGTCTACTCCCCTCGACAAGACCGCCCCGATCGCCATTGTTGGCGCGGG
CGTGTTCGGCCTCTCCAGCGCCATCCATCTGGTCCGGAGAGGGTATCGCA
ACGTCACCGTCTTTGACCGTCAGCCCTACCACGAGACGCTCTACGACTTT
GACCGTGGCTGTGATGCAGCATCTGCAGACTGCAACAAGATCATCCGGGC
CGCCTACGGCCACGAAACATGGTACCAGAACTTCACGCTCGAAGCAATCA
AAGCATGGGAGACATGGAACGAGTCTCTTGCCAAGGGAAGCACTCTTCCC
CCGGGAATGACTAGCAAGGAACGCATCTATGTCAACTGCGGCAACTACCA
TTTCGGCGACCACGGCGACGCAGCCGGCCTGAACCCCTTCGAAAAGGCTT
CAGTAGAGAACCTGACCAAAGCAGGCCTCGGACACACTCAGTACCTGTTT
GCCTCCAACCCGCAAGAGGCGACCCGAGCCAAGGTAGATGGCTACGGCTA
CGCTGTCGACCCCTTCCACCTATCGCGCGACGGACAACAACCAAGCGGGT
ACCTCGACATGATCGGGGGATTCGTCTACGCAGACAAGGCATGTCGCTAC
GCACTTCACCTAGCGCAGCAACTAGGTGTCAAGCTCATCTTAGATCGACA
AGCCGGTCGCTTCGAGGGTTTGCTCGAATCCAATGGTGAGGTAACCGGGA
TCCGCACCGCAGATGGCAAACACCACACCGCCGCCCTGACCATCCTCGCC
TGCGGCGGATGGACACCTACCCTCGTCCCAGAGATGGACGGGCTCTGCGA
AACCACCGCGGGATCCGTGGCGATGATCCAAATCCCAGAGGGTTCTCCAC
TCCGCCAACGATTCTCGGCATCCAACTTCCCGGTCTTCCAATGGAACGTG
CGCAGCGGGGAGAATGGCAACCTGTACGGCTTCCCTCTGGATGACCGGGG
GGTGCTGAAGATCGGATACCGCGGAACGAAATACACGCATCCCCAGGTGC
AGTTAGATGGACAGGTGCGCAGTGCCCCGATCACCAAGTGGACGGCCCCG
TCTGTGTCCGGGTTACCGGAGAAGTCTGTCTCGGTGATTCAGGGGTTCTT
GGATCGGTATTTACCCGAGTTGAAAGAGGCGGGGATCGGGATTTCGCAGA
CGCGATTATGCTGGTACACAGATTCGTATGATAATCACTGGGTGATTGAT
CGGGTGCCTGGGAAGAAGGGGGTGATGGTAGCTACGGGGGGGAGTGGACA
TGGGTTCAAATTCCTACCGGTGTTGGGACAGTTGGTGGTGGATCGCGTGG
AGGAAGTGCAATCGGAGCTACTGGAGCTGGTCAAGTGGCGGAAGTTGGGA
GCTGGGGAGAAGGGGTCGAACGAGTTGATGAGAGGGTTCAAGGATGGAAA
TGCGTTGCAGAAGGTGAAGTTGGTGAGTGAGCCAGGGAGGGAGAGTCGGC
TGTAAATGTCTACTCCCCTCGACAAGACCGCCCCGATCGCCATTGTTGGC
GCGGGCGTGTTCGGCCTCTCCAGCGCCATCCATCTGGTCCGGAGAGGGTA
TCGCAACGTCACCGTCTTTGACCGTCAGCCCTACCACGAGACGCTCTACG
ACTTTGACCGTGGCTGTGATGCAGCATCTGCAGACTGCAACAAGATCATC
CGGGCCGCCTACGGCCACGAAACATGGTACCAGAACTTCACGCTCGAAGC
AATCAAAGCATGGGAGACATGGAACGAGTCTCTTGCCAAGGGAAGCACTC
TTCCCCCGGGAATGACTAGCAAGGAACGCATCTATGTCAACTGCGGCAAC
TACCATTTCGGCGACCACGGCGACGCAGCCGGCCTGAACCCCTTCGAAAA
GGCTTCAGTAGAGAACCTGACCAAAGCAGGCCTCGGACACACTCAGTACC
TGTTTGCCTCCAACCCGCAAGAGGCGACCCGAGCCAAGGTAGATGGCTAC
GGCTACGCTGTCGACCCCTTCCACCTATCGCGCGACGGACAACAACCAAG
CGGGTACCTCGACATGATCGGGGGATTCGTCTACGCAGACAAGGCATGTC
GCTACGCACTTCACCTAGCGCAGCAACTAGGTGTCAAGCTCATCTTAGAT
CGACAAGCCGGTCGCTTCGAGGGTTTGCTCGAATCCAATGGTGAGGTAAC
CGGGATCCGCACCGCAGATGGCAAACACCACACCGCCGCCCTGACCATCC
TCGCCTGCGGCGGATGGACACCTACCCTCGTCCCAGAGATGGACGGGCTC
TGCGAAACCACCGCGGGATCCGTGGCGATGATCCAAATCCCAGAGGGTTC
TCCACTCCGCCAACGATTCTCGGCATCCAACTTCCCGGTCTTCCAATGGA
ACGTGCGCAGCGGGGAGAATGGCAACCTGTACGGCTTCCCTCTGGATGAC
CGGGGGGTGCTGAAGATCGGATACCGCGGAACGAAATACACGCATCCCCA
GGTGCAGTTAGATGGACAGGTGCGCAGTGCCCCGATCACCAAGTGGACGG
CCCCGTCTGTGTCCGGGTTACCGGAGAAGTCTGTCTCGGTGATTCAGGGG
TTCTTGGATCGGTATTTACCCGAGTTGAAAGAGGCGGGGATCGGGATTTC
GCAGACGCGATTATGCTGGTACACAGATTCGTATGATAATCACTGGGTGA
TTGATCGGGTGCCTGGGAAGAAGGGGGTGATGGTAGCTACGGGGGGGAGT
GGACATGGGTTCAAATTCCTACCGGTGTTGGGACAGTTGGTGGTGGATCG
CGTGGAGGAAGTGCAATCGGAGCTACTGGAGCTGGTCAAGTGGCGGAAGT
TGGGAGCTGGGGAGAAGGGGTCGAACGAGTTGATGAGAGGGTTCAAGGAT
GGAAATGCGTTGCAGAAGGTGAAGTTGGTGAGTGAGCCAGGGAGGGAGAG
TCGGCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011361ATCC10864_011361Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011361-T1.exon1ATCC10864_011361-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011361-T1.exon2ATCC10864_011361-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011361-T1.cdsATCC10864_011361-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011361-T1ATCC10864_011361-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01266
InterProIPR006076
InterProIPR036188
Properties
Property NameValue
NoteantiSMASH:Cluster_1000282.1
NoteSMCOG1103:FAD dependent oxidoreductase
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:91473..92977 +
Powered by Drupal