You are here

Home

ATCC10864_011393-T1, ATCC10864_011393-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011393-T1
Unique NameATCC10864_011393-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:178213..178743+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011393-T1 ID=ATCC10864_011393-T1|Name=ATCC10864_011393-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=531bp|location=Sequence derived from alignment at MCQH01000282:178213..178743+ (Aspergillus niger ATCC 10864)
ATGGACCAGCTCAACAGGTAAACACTCCCCTCCCCCTCCCCCTCCCCCAA
GCCCCATACACCCTGGAACTCTTTTCCGAAGAGCAACACCCAGATGCAGA
GGAGAATTTTGACATCCCGTCCAGCAAGCAAGAAATCAACGACGCCATCG
CAAATCATGCGTCCTTCATCCTGATGTTCACGGCCGTGTGGAGTGACGTC
GGCAATGTAACCAAGGAAAAGTTTGAGAGGTAAAGCAGCCAGCCTGAATT
CCCTACTCTGTGATGTGATGTTTCGAACGATGATGCGTTTACCTCGTTTC
GCCTCTTTCATTGCTTGATACTAACTCAAGAATACTAGCATTGGTGCCAA
ATACCCTACCGTGTACATGGCCTGGGTTAGCACCGATGACCATCCCGAGC
TGGCTGAGGAATGGGGGTACACTGCTATTCCGGCTACCGTTGGTTATAAG
AATGGCACCAAGGTGGAATATTACATCGGTCCTCAATTAGTGGACCAGCA
GGTCGAGGCGTTTATCAAGAAGGTGGTCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000282:178213..178743+

>ATCC10864_011393-T1 ID=ATCC10864_011393-T1|Name=ATCC10864_011393-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=945bp|location=Sequence derived from alignment at MCQH01000282:178213..178743+ (Aspergillus niger ATCC 10864)
ATGGACCAGCTCAACAGCAAGCAAGAAATCAACGACGCCATCGCAAATCA
TGCGTCCTTCATCCTGATGTTCACGGCCGTGTGGAGTGACGTCGGCAATG
TAACCAAGGAAAAGTTTGAGAGCATTGGTGCCAAATACCCTACCGTGTAC
ATGGCCTGGGTTAGCACCGATGACCATCCCGAGCTGGCTGAGGAATGGGG
GTACACTGCTATTCCGGCTACCGTTGGTTATAAGAATGGCACCAAGGTGG
AATATTACATCGGTCCTCAATTAGTGGACCAGCAGGTCGAGGCGTTTATC
AAGAAGGTGGTCTAAATGGACCAGCTCAACAGCAAGCAAGAAATCAACGA
CGCCATCGCAAATCATGCGTCCTTCATCCTGATGTTCACGGCCGTGTGGA
GTGACGTCGGCAATGTAACCAAGGAAAAGTTTGAGAGCATTGGTGCCAAA
TACCCTACCGTGTACATGGCCTGGGTTAGCACCGATGACCATCCCGAGCT
GGCTGAGGAATGGGGGTACACTGCTATTCCGGCTACCGTTGGTTATAAGA
ATGGCACCAAGGTGGAATATTACATCGGTCCTCAATTAGTGGACCAGCAG
GTCGAGGCGTTTATCAAGAAGGTGGTCTAAATGGACCAGCTCAACAGCAA
GCAAGAAATCAACGACGCCATCGCAAATCATGCGTCCTTCATCCTGATGT
TCACGGCCGTGTGGAGTGACGTCGGCAATGTAACCAAGGAAAAGTTTGAG
AGCATTGGTGCCAAATACCCTACCGTGTACATGGCCTGGGTTAGCACCGA
TGACCATCCCGAGCTGGCTGAGGAATGGGGGTACACTGCTATTCCGGCTA
CCGTTGGTTATAAGAATGGCACCAAGGTGGAATATTACATCGGTCCTCAA
TTAGTGGACCAGCAGGTCGAGGCGTTTATCAAGAAGGTGGTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011393ATCC10864_011393Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011393-T1.exon1ATCC10864_011393-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011393-T1.exon2ATCC10864_011393-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011393-T1.exon3ATCC10864_011393-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011393-T1.cdsATCC10864_011393-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011393-T1ATCC10864_011393-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013766
PFAMPF00085
InterProIPR036249
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:178213..178743 +
Powered by Drupal