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ATCC10864_011442-T1, ATCC10864_011442-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011442-T1
Unique NameATCC10864_011442-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:321523..322607+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011442-T1 ID=ATCC10864_011442-T1|Name=ATCC10864_011442-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1085bp|location=Sequence derived from alignment at MCQH01000282:321523..322607+ (Aspergillus niger ATCC 10864)
ATGCAGGCTGCCCAGCAGTCCTGGGGTACGTCCATCCCCAACCCCATCCC
CACCCCCACTCCATCTCACAGCACTCTAACCCCATAACCACAGAATTCGA
AAATGCCGTCACCCTCATAGACCCCCACCGAGACGCGCTCTACAAATACG
ATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAAAGAC
CCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCAAGAT
GGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTAATGC
AAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCGACTT
CCCGTAGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCAACGA
ATACATGGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGGATGGAAA
ATGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTTATCG
GGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGTTTGT
GGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTGGATA
TTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGGGGAG
GGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGAACAA
GGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAGGTGT
CGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTGGAAT
AAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGAGGGA
TTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGGGCCA
CGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAAGTTAAG
GATCCGCAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTGTCTCGGA
AGAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTGTTTCAAA
ATGTTGGGGAGGGGAATAGATCGGAGAAATCATGA
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Coding sequence (CDS) from alignment at MCQH01000282:321523..322607+

>ATCC10864_011442-T1 ID=ATCC10864_011442-T1|Name=ATCC10864_011442-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2034bp|location=Sequence derived from alignment at MCQH01000282:321523..322607+ (Aspergillus niger ATCC 10864)
ATGCAGGCTGCCCAGCAGTCCTGGGAATTCGAAAATGCCGTCACCCTCAT
AGACCCCCACCGAGACGCGCTCTACAAATACGATGAAGAGACACACAAAG
CTCTTAGCGCTCAGCGCCCTTGGTCCAAAGACCCACACTACTTCAAATCG
ATCCGAATCTCCGCCGTCGCACTCCTCAAGATGGTAATGCACGCGCGGTC
CGGCGGCTCCCTCGAAGTAATGGGCCTAATGCAAGGCTATGTCCTGCCCG
AAACCTTCGTGGTAACCGACGCCTTCCGACTTCCCGTAGAGGGAACCGAA
ACGCGAGTCAACGCCCAAGACGAAGCCAACGAATACATGGTCTCATACCT
ACAGTCGTGCCGGGATGCAGGACGGATGGAAAATGCAGTGGGCTGGTACC
ACAGTCATCCCGGGTACGGGTGCTGGTTATCGGGCATTGATGTGACGACG
CAGGATATGCAGCAGCTCGGGGGACCGTTTGTGGCGGTGGTGGTTGATCC
AGAGAGGACGATCTCAGCAGGGAAGGTGGATATTGGGGCATTTAGGACGT
TTCCGAAGGATTATACGCCGCCGAAAGGGGAGGGGGGTAGTGGTGCTGGG
GAGGATGACTATCAGACGGTGCCGTTGAACAAGGCGGAGGACTTTGGGGC
ACATGCGTCACATTATTATTCGCTGGAGGTGTCGGTGTTTAAGAGTGCGT
TGGATACGGAGATTCTGTCGTTGCTGTGGAATAAGTATTGGGTTGCGACG
TTGAGTCAGAGTCCGTTGTTTACGACGAGGGATTATGGGAGTAAGCAGAT
GGTGGATTTGAGTCAGAAGATTAAGCGGGCCACGAGGGGCGTGGAGAGTA
GTGCTTCGCGAGGGAATCTGGCGCAAGTTAAGGATCCGCAGTTGGAGAGG
GTGGCGAGGGATGGGCAGCGGATTGTCTCGGAAGAAGTGAAGGGTTTGTT
GGCGGCGGAAGTGAAGATGAAGCTGTTTCAAAATGTTGGGGAGGGGAATA
GATCGGAGAAATCATGAATGCAGGCTGCCCAGCAGTCCTGGGAATTCGAA
AATGCCGTCACCCTCATAGACCCCCACCGAGACGCGCTCTACAAATACGA
TGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAAAGACC
CACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCAAGATG
GTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTAATGCA
AGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCGACTTC
CCGTAGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCAACGAA
TACATGGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGGATGGAAAA
TGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTTATCGG
GCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGTTTGTG
GCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTGGATAT
TGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGGGGAGG
GGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGAACAAG
GCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAGGTGTC
GGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTGGAATA
AGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGAGGGAT
TATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGGGCCAC
GAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAAGTTAAGG
ATCCGCAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTGTCTCGGAA
GAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTGTTTCAAAA
TGTTGGGGAGGGGAATAGATCGGAGAAATCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0005515protein binding
GO:0070122isopeptidase activity
GO:0008237metallopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSN5ATCC10864_011442Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011442-T1.exon1ATCC10864_011442-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011442-T1.exon2ATCC10864_011442-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011442-T1.cdsATCC10864_011442-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011442-T1ATCC10864_011442-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR037740
InterProIPR000555
InterProIPR037518
PFAMPF18323
PFAMPF01398
InterProIPR040961
Properties
Property NameValue
NoteBUSCO:EOG09263RDD
NoteMEROPS:MER0122119
Productproteasome regulatory particle subunit RPN11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:321523..322607 +
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