You are here

Home

ATCC10864_011454-T1, ATCC10864_011454-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011454-T1
Unique NameATCC10864_011454-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:368382..369331+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011454-T1 ID=ATCC10864_011454-T1|Name=ATCC10864_011454-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=950bp|location=Sequence derived from alignment at MCQH01000282:368382..369331+ (Aspergillus niger ATCC 10864)
ATGGCTGACTCTCCAACTCTGGAGCTCGACAGCCCCACAGAACAGGATGT
CGCGCCCGCAGAAGCGCAGCAGCCACCGCCCAAGCCAGCGAAAAGAGACG
CCTGTACGCTCCGAACACAAACACCGATTCACCCCTCTCCCTCCCCTTGC
ATACCAGACGCAGGAACCACTAACTGATTATTCCTATCTCAGTTACAGAA
CTACTTGCTCCGAAACCTAAACATCCCAAACATGGCGATCCTAGCACCTC
CAAACACACTCCTACTACCTCGAAAAGGCGAGCCATCGGTGGCCCCCGAG
ACGGCCTAGGCGTCTACATCGCGAAACCAGAAACCTTCCCCTCCAACGTA
GTAGTATACTACGACGATGATTTCGTCGTCATTCACGACATGTTCCCCAA
GGCAACCCTCCACCTCCTACTTCTCCCACGAGATCCTCAGAAAACGCGCC
TCCATCCATTCGAAGCCTTCGAGGACGCCGACTTCCTGGCACAAGTGAAA
AGGGAAACGCAGAAGCTCCGCAAACTCGCGGCTGGTGAGCTCAGACGAAT
ACATGGGAAATACTCGGCGCAGGATAAGGAAAGACAGGAGGCCCTGAATG
TAGAACCACCGCTGGAGGAGCTGCCGCCGGGGAGGAACTGGGAGCAAGAG
ATCATGTGTGGAATTCATGCGCATCCCTCCATGAATCACTTGCATGTGCA
CGTTATCTCCGTGGATCGGTTCAGCGATCGTCTCAAGCATAGGAAACATT
ACAATAGCTTTTCTACACCGTTTTTCGTCAAAATTGATGATTTCCCACTG
GCGCCGGATGATGTGCGGAGGCATCCCGATGAACAAGGCTACCTGCGCAG
GGATTTTGTCTGTTGGCGCTGTGGGAAGCAATTTGGGAACAAATTCGCCG
AGTTGAAGCTACATTTAAAGGAGGAGTTTGATGCATGGAGAAAGCTGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000282:368382..369331+

>ATCC10864_011454-T1 ID=ATCC10864_011454-T1|Name=ATCC10864_011454-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1722bp|location=Sequence derived from alignment at MCQH01000282:368382..369331+ (Aspergillus niger ATCC 10864)
ATGGCTGACTCTCCAACTCTGGAGCTCGACAGCCCCACAGAACAGGATGT
CGCGCCCGCAGAAGCGCAGCAGCCACCGCCCAAGCCAGCGAAAAGAGACG
CCTTTACAGAACTACTTGCTCCGAAACCTAAACATCCCAAACATGGCGAT
CCTAGCACCTCCAAACACACTCCTACTACCTCGAAAAGGCGAGCCATCGG
TGGCCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACCAGAAACCTTCC
CCTCCAACGTAGTAGTATACTACGACGATGATTTCGTCGTCATTCACGAC
ATGTTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCACGAGATCCTCA
GAAAACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGCCGACTTCCTGG
CACAAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCGCGGCTGGTGAG
CTCAGACGAATACATGGGAAATACTCGGCGCAGGATAAGGAAAGACAGGA
GGCCCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCCGGGGAGGAACT
GGGAGCAAGAGATCATGTGTGGAATTCATGCGCATCCCTCCATGAATCAC
TTGCATGTGCACGTTATCTCCGTGGATCGGTTCAGCGATCGTCTCAAGCA
TAGGAAACATTACAATAGCTTTTCTACACCGTTTTTCGTCAAAATTGATG
ATTTCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCGATGAACAAGGC
TACCTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAGCAATTTGGGAA
CAAATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTTTGATGCATGGA
GAAAGCTGTGAATGGCTGACTCTCCAACTCTGGAGCTCGACAGCCCCACA
GAACAGGATGTCGCGCCCGCAGAAGCGCAGCAGCCACCGCCCAAGCCAGC
GAAAAGAGACGCCTTTACAGAACTACTTGCTCCGAAACCTAAACATCCCA
AACATGGCGATCCTAGCACCTCCAAACACACTCCTACTACCTCGAAAAGG
CGAGCCATCGGTGGCCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACC
AGAAACCTTCCCCTCCAACGTAGTAGTATACTACGACGATGATTTCGTCG
TCATTCACGACATGTTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCA
CGAGATCCTCAGAAAACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGC
CGACTTCCTGGCACAAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCG
CGGCTGGTGAGCTCAGACGAATACATGGGAAATACTCGGCGCAGGATAAG
GAAAGACAGGAGGCCCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCC
GGGGAGGAACTGGGAGCAAGAGATCATGTGTGGAATTCATGCGCATCCCT
CCATGAATCACTTGCATGTGCACGTTATCTCCGTGGATCGGTTCAGCGAT
CGTCTCAAGCATAGGAAACATTACAATAGCTTTTCTACACCGTTTTTCGT
CAAAATTGATGATTTCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCG
ATGAACAAGGCTACCTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAG
CAATTTGGGAACAAATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTT
TGATGCATGGAGAAAGCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0033699DNA 5'-adenosine monophosphate hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011454ATCC10864_011454Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011454-T1.exon1ATCC10864_011454-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011454-T1.exon2ATCC10864_011454-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011454-T1.cdsATCC10864_011454-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011454-T1ATCC10864_011454-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01230
InterProIPR001310
InterProIPR036265
InterProIPR026963
PFAMPF11969
PFAMPF16278
InterProIPR032566
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:368382..369331 +
Powered by Drupal