|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000282:373345..375388- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011457-T1 ID=ATCC10864_011457-T1|Name=ATCC10864_011457-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2044bp|location=Sequence derived from alignment at MCQH01000282:373345..375388- (Aspergillus niger ATCC 10864)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGGTTCGTGAGGCAAGACTTGACCCCTTCCTC
GGTGACAGACTGACGCTTTGACTGCAGATAAGGAACTTCAAAGGAGACCC
GTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCC
TGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCAC
TTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAG
CCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCAC
GTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCG
CACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGA
CCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCG
TCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAA
ATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGG
TTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGA
CCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACAT
CTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAG
TCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATC
CAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTC
GAACAATTTCTGCAGCGTAGGACGGAATACTGGAAAGCGAATCCTCGGAA
GCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGA
AACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAACA
GCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACAGTAAGTCATGCCG
TCTTAGTAATAACCACTGGGGCATCTTACAGTTGATTAACAGTCTATGAT
AGTCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCC
TTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTACCGC
TTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGCGTGGTCGATTT
CTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTG
AGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGC
TTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAA
AGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAG
GGCTGACTGCAGTTGAGTAAGTCATCTCGGCTCCCTCACATATCGACACT
AAGATCGCCGTGAGGTCGATTATCTAACCATAACTCTTCCTATGTCCATT
AGTCTAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTT
CATCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATG
GCAAACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATT
CAAGAGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAA
CACTAATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTG
GATGGGAGAGGCGCTTTTCTATGTTCCTTACTACTATTTCCTAA back to topCoding sequence (CDS) from alignment at MCQH01000282:373345..375388- >ATCC10864_011457-T1 ID=ATCC10864_011457-T1|Name=ATCC10864_011457-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7344bp|location=Sequence derived from alignment at MCQH01000282:373345..375388- (Aspergillus niger ATCC 10864)
TCTAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTTCA
TCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATGGC
AAACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATTCA
AGAGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAACA
CTAATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTGGA
TGGGAGAGGCGCTTTTCTATGTTCCTTACTACTATTTCCTAATCATAGCA
GGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAA
ACTTCATGACAACATCTCATATGACAACATACAGTACCGCTTCCCCTTTC
AAAACTTCTGCTACCGAACCACAGTCCGCGTGGTCGATTTCTTCCCCCCA
CGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTC
TCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGC
TCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATG
AGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGC
AGTTGAATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGA
CAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCCCACGTCTA
GCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAG
AAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTCGATGGTTT
TCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATATTGTCCAGG
CTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTC
AAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAAATTGTCAA
GGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCACCGATTACA
CGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCGGTGACAAT
GACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGACCCAAGAA
GAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCACACTCTGGG
AACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACGATCTCATC
CAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGGATATTAGA
AGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAATGTACACA
CCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGCAGCGTAGG
ACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGG
CCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAA
AGGTGGAAGAAGGCCAAGTTCCCATAACAGCAGCAAGCAGCAAGCGATAT
GCGCCAAATGAAAACAATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATG
TGTCCACCGCACTCTCTACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTA
GTCGACGTCTTCGGCGGAATATGGAAGTCTAGAGGCTCGTCCAGCTGTAT
TACCTTCACCATCAAGGACTCAGGTCTTGACAACGGACATACATGGGACG
GGTTGAAAATCAAATATTTCAAAGACAATGAGAGCCATTTACCTCCCGTC
CAACTACGCGACGTGATCCTGATACGAGATCTGTGGTCTAAGACAAAACC
AAACCGATCTGAAAGAACTCCGAGAAAAGCTCTTCATCTTATGGGGAGAC
CTCGAGGAGCGCAAAAGAGCGGCCCTACACGATGGCAAACAGGACCTCGG
CCCAGTTTCATGCAGGCCTTTCAATTGCTGCATTCAAGAGTATGGTGTTC
TTTGCAGACATCGTTCTGATACTGAGAACACCAACACTAATAATGAAGAT
GATGAGAATGGCTGTAGCCATGATGACTGCTTTGGATGGGAGAGGCGCTT
TTCTATGTTCCTTACTACTATTTCCTAATCATAGCAGGCAGCCCGTCCGT
CCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAAACTTCATGACAACA
TCTCATATGACAACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTAC
CGAACCACAGTCCGCGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTT
CTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCG
ATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTC
CCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGC
TGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGCAGTTGAATAAGGAA
CTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCAT
GGGCAATCTTTCGCCTGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTT
TGTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAGAAGATACATGCTTT
GAATTTGTTGAATAGCCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAG
CACAAGATACTCCACGTGGCTCCTATATTGTCCAGGCTGCAATTCCAAAT
TCCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGA
GCGAAATTATGTTGACCTCGTGGGGCAAATTGTCAAGGTCTATACCAACG
ACAGTGAAAAGGTCGTCCTCTATTTCACCGATTACACGGCCAACGATGGT
CTCGAAGACCGCCAAATAAACGATGCCGGTGACAATGACTTTGGCACTGA
AGGAGATATCTACGGTTACCAAAAACGACCCAAGAAGAAATGGACAGGAC
CAGTTGGACGGATGACCCTCACAATCACACTCTGGGAACCCCATGCATCC
TATGCGCGCCAACATCTGAAGGATAACGATCTCATCCAGCTATACAATGT
GCATGTCAAGCGCAGTCGCATCAATGGGATATTAGAAGCCAGTATCCACA
CAAACCGCACGAATCCAAATTCAGTCAATGTACACACCCTGGATCGTCGC
AAAGACACGTTTGTCGAACAATTTCTGCAGCGTAGGACGGAATACTGGAA
AGCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGA
AGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGC
CAAGTTCCCATAACAGCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAA
CAATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTC
TCTACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGG
CGGAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCA
AGGACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAA
TATTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGT
GATCCTGATACGAGATCTGTGGTCTAAGACAAAACCAAACCGATCTGAAA
GAACTCCGAGAAAAGCTCTTCATCTTATGGGGAGACCTCGAGGAGCGCAA
AAGAGCGGCCCTACACGATGGCAAACAGGACCTCGGCCCAGTTTCATGCA
GGCCTTTCAATTGCTGCATTCAAGAGTATGGTGTTCTTTGCAGACATCGT
TCTGATACTGAGAACACCAACACTAATAATGAAGATGATGAGAATGGCTG
TAGCCATGATGACTGCTTTGGATGGGAGAGGCGCTTTTCTATGTTCCTTA
CTACTATTTCCTAATCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCC
TGGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTCATATGACAAC
ATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCG
CGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAG
ACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGA
TGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGC
AGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAG
AGTATCTATTAGGGCTGACTGCAGTTGAATAAGGAACTTCAAAGGAGACC
CGTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGC
CTGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCA
CTTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATA
GCCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCA
CGTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCC
GCACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTG
ACCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTC
GTCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCA
AATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACG
GTTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATG
ACCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACA
TCTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCA
GTCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAAT
CCAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGT
CGAACAATTTCTGCAGCGTAGGACGGAATACTGGAAAGCGAATCCTCGGA
AGCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAG
AAACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAAC
AGCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACAATGTCAGGCGGC
TATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAA
AGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGT
CTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGGTCTT
GACAACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAGACAA
TGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATACGAG
ATCTGTGGTCTAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAA
GCTCTTCATCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTAC
ACGATGGCAAACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGC
TGCATTCAAGAGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAA
CACCAACACTAATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACT
GCTTTGGATGGGAGAGGCGCTTTTCTATGTTCCTTACTACTATTTCCTAA
TCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCCTT
TCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTACCGCTT
CCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGCGTGGTCGATTTCT
TCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTGAG
GGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGCTT
CTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAAG
AACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAGGG
CTGACTGCAGTTGAATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCT
GCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCC
CACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTC
CTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTC
GATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATAT
TGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTT
CTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAA
ATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCAC
CGATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCG
GTGACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGA
CCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCAC
ACTCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACG
ATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGG
ATATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAA
TGTACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGC
AGCGTAGGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAA
AACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAA
AGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAACAGCAGCAAGCAGCA
AGCGATATGCGCCAAATGAAAACAATGTCAGGCGGCTATGCCTCCCGGTT
CGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAAAGTAAGTGTCATTG
GCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGTCTAGAGGCTCGTCC
AGCTGTATTACCTTCACCATCAAGGACTCAGGTCTTGACAACGGACATAC
ATGGGACGGGTTGAAAATCAAATATTTCAAAGACAATGAGAGCCATTTAC
CTCCCGTCCAACTACGCGACGTGATCCTGATACGAGATCTGTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000723 | telomere maintenance |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000781 | chromosome, telomeric region |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0043047 | single-stranded telomeric DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR028389 |
| InterPro | IPR032042 |
| InterPro | IPR012340 |
| PFAM | PF16686 |
| InterPro | IPR011564 |
| PFAM | PF02765 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000282 | supercontig | MCQH01000282:373345..375388 - |
|
