You are here

Home

ATCC10864_011471-T1, ATCC10864_011471-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011471-T1
Unique NameATCC10864_011471-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:420468..422292+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011471-T1 ID=ATCC10864_011471-T1|Name=ATCC10864_011471-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1825bp|location=Sequence derived from alignment at MCQH01000282:420468..422292+ (Aspergillus niger ATCC 10864)
ATGTCGCGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGA
GTCCTCCGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCAT
TGGAGAAGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGT
GCGCATTCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGC
CCGCTTCACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTG
TCGACTTTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTT
CGCAAGAAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTAT
GTGCGATTGCTGTTATACTTTTTTCTTTAGGTGATGTACTGACGGTGGGT
GCGTTCTATAGGTGCGACTTGGGCTAGTTCGATGTATGCTTGCTGTTCCT
CTATGCCGATACTTGGACTGTATTCCAGTTACTGATAAAGCGCAGTTTCT
CTACGGGCACCAAGCAAATCGATGCGGAGTTCCACGTGGGTGAGGAGGTC
GGCACATTGGGTACAACGCTGCTGTTGTTCGGTTTTGGTAGGTCTTGATA
CTATCGCTCGACCTCTGCGCATAAGTTGACGTGATTAGGACTTGGCCCTC
TCGTGTGGGCACCGCTATCCGAGGTCTATGGACGTAAGCCTGCTGTGCTT
GCGCCGTACTTCATCGCAGCCATCTTCTCGTTCGGTACCGCCACAGCCAA
GGACCTCCAGACCGTCATGCTGACTCGGTTCTTCTGCGGATTCTTTGGCT
CCGCGCCCGTCACGAACACCGGTGGTGTCCTGAGCGACATCTGGACGGCA
GAGCAGCGAGGTGCCGCTATTGTTGGTTACGCCATGGCTGTGGTCGGAGG
ACCGGTGCTGGGTCCGATTGTCGGAGGTGCCATCTGCCAGAGCTATCTCG
GCTGGCGCTGGACCGAATACATTACCGGAATCATGATGATGTTCTTCCTC
GCGATGGACCTCATCTTCCTCGACGAGAGCTACCCGGCTGTTCTCCTCGT
TTACAAGGCTCAGCGACTCCGCTTCGAAACAGGCAACTGGGCTCTCCACG
CCCGTCATGAAGAATGGGACGTCACCTTCAAGGAACTCGGCAATAAGTAT
CTCATCCGACCCTTCGCCCTCCTCACTACGCCCATCTGCTTCCTCGTCGC
CATCTACGCCTCCTTCGTCTACGGTATCCTATACCTCAGTTTGGCCTCCT
TCCCCATCGAATTCCAAGAAGTCCGCGGCTGGAACCAAGTCGTCGGCGCC
CTGCCTTTCCTCGCCTACCTCGTCGGTATCCTCTTCGGCGCCTGCATTAA
CCTCTTCAACCAGAAATTCTACATCGCTCGCTTTAAAGCGAACAACAACT
TCCCCGTCCCTGAAGCCCGTCTGCCCCCAATGATGCTCGGCTCTATCGTT
TTCGCCGCCGGTCTCTTCATCTTCGCCTGGACAAGTGACCCCCACATCCA
TTGGATCGCTCCCATCATCGGCGCCGTCTGCATGGGTTTCGGCTTCTTCA
CCATCTTCCAAGCTGCCCTGAACTACCTGATCGACACCTTCCAGAAAGTC
TCCGCTAGTGCTGTTGCGGCGAACACTTTCCTGAGAAGTCTGTTCGCGGG
CTGCTTCCCTCTCTTCGCTAATATCATGTTCCATCGTCTTGGTGTGGACT
GGGCTGCGAGTGTGCTAGGTTTTGTGGCTGTCGCATTGATCCCGATCCCT
TACCTGTTCTATATCTTCGGAAAGCGCATCAGGGCGAAGGGAAAGTGGTC
CCGGGCTTCGGTTTACGGGTACTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000282:420468..422292+

>ATCC10864_011471-T1 ID=ATCC10864_011471-T1|Name=ATCC10864_011471-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6588bp|location=Sequence derived from alignment at MCQH01000282:420468..422292+ (Aspergillus niger ATCC 10864)
ATGTCGCGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGA
GTCCTCCGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCAT
TGGAGAAGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGT
GCGCATTCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGC
CCGCTTCACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTG
TCGACTTTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTT
CGCAAGAAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGC
GACTTGGGCTAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGG
AGTTCCACGTGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTG
TTCGGTTTTGGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTA
TGGACGTAAGCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCT
CGTTCGGTACCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGG
TTCTTCTGCGGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGT
CCTGAGCGACATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTT
ACGCCATGGCTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGT
GCCATCTGCCAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGG
AATCATGATGATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGA
GCTACCCGGCTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAA
ACAGGCAACTGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTT
CAAGGAACTCGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTA
CGCCCATCTGCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATC
CTATACCTCAGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGG
CTGGAACCAAGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTA
TCCTCTTCGGCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCT
CGCTTTAAAGCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCC
AATGATGCTCGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCT
GGACAAGTGACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTC
TGCATGGGTTTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCT
GATCGACACCTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTT
TCCTGAGAAGTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATG
TTCCATCGTCTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGC
TGTCGCATTGATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCA
TCAGGGCGAAGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGAATG
TCGCGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTC
CTCCGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCATTGG
AGAAGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCG
CATTCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCG
CTTCACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCG
ACTTTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGC
AAGAAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGCGAC
TTGGGCTAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGGAGT
TCCACGTGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTGTTC
GGTTTTGGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTATGG
ACGTAAGCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCTCGT
TCGGTACCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGGTTC
TTCTGCGGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGTCCT
GAGCGACATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTTACG
CCATGGCTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGTGCC
ATCTGCCAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGGAAT
CATGATGATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGAGCT
ACCCGGCTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAAACA
GGCAACTGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTTCAA
GGAACTCGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTACGC
CCATCTGCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATCCTA
TACCTCAGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGGCTG
GAACCAAGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTATCC
TCTTCGGCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCTCGC
TTTAAAGCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCCAAT
GATGCTCGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCTGGA
CAAGTGACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTCTGC
ATGGGTTTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCTGAT
CGACACCTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTTTCC
TGAGAAGTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATGTTC
CATCGTCTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGCTGT
CGCATTGATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCATCA
GGGCGAAGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGAATGTCG
CGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTCCTC
CGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCATTGGAGA
AGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCGCAT
TCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCGCTT
CACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCGACT
TTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGCAAG
AAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGCGACTTG
GGCTAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGGAGTTCC
ACGTGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTGTTCGGT
TTTGGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTATGGACG
TAAGCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCTCGTTCG
GTACCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGGTTCTTC
TGCGGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGTCCTGAG
CGACATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTTACGCCA
TGGCTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGTGCCATC
TGCCAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGGAATCAT
GATGATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGAGCTACC
CGGCTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAAACAGGC
AACTGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTTCAAGGA
ACTCGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTACGCCCA
TCTGCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATCCTATAC
CTCAGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGGCTGGAA
CCAAGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTATCCTCT
TCGGCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCTCGCTTT
AAAGCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCCAATGAT
GCTCGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCTGGACAA
GTGACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTCTGCATG
GGTTTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCTGATCGA
CACCTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTTTCCTGA
GAAGTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATGTTCCAT
CGTCTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGCTGTCGC
ATTGATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCATCAGGG
CGAAGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGAATGTCGCGA
CGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTCCTCCGA
AGACCACAGCGCATACGTACACCAGGATGATCCGACTGCATTGGAGAAGC
AGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCGCATTCG
GTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCGCTTCAC
GCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCGACTTTG
ATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGCAAGAAG
GCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGCGACTTGGGC
TAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGGAGTTCCACG
TGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTGTTCGGTTTT
GGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTATGGACGTAA
GCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCTCGTTCGGTA
CCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGGTTCTTCTGC
GGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGTCCTGAGCGA
CATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTTACGCCATGG
CTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGTGCCATCTGC
CAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGGAATCATGAT
GATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGAGCTACCCGG
CTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAAACAGGCAAC
TGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTTCAAGGAACT
CGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTACGCCCATCT
GCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATCCTATACCTC
AGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGGCTGGAACCA
AGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTATCCTCTTCG
GCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCTCGCTTTAAA
GCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCCAATGATGCT
CGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCTGGACAAGTG
ACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTCTGCATGGGT
TTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCTGATCGACAC
CTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTTTCCTGAGAA
GTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATGTTCCATCGT
CTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGCTGTCGCATT
GATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCATCAGGGCGA
AGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011471ATCC10864_011471Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011471-T1.exon1ATCC10864_011471-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011471-T1.exon2ATCC10864_011471-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011471-T1.exon3ATCC10864_011471-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011471-T1.exon4ATCC10864_011471-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011471-T1.cdsATCC10864_011471-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011471-T1ATCC10864_011471-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteantiSMASH:Cluster_1000282.2
NoteSMCOG1106:major facilitator transporter
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:420468..422292 +
Powered by Drupal