You are here

Home

ATCC10864_011485-T1, ATCC10864_011485-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011485-T1
Unique NameATCC10864_011485-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:488316..489147-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011485-T1 ID=ATCC10864_011485-T1|Name=ATCC10864_011485-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=832bp|location=Sequence derived from alignment at MCQH01000282:488316..489147- (Aspergillus niger ATCC 10864)
ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCG
ATCTCTCGAGACTCAGGTACGAGCATCGCTTCCCTGTCATACGGAATGGA
AATCCTAACAATGTGTATACATGATCATAGACCGAGAACCTCTTCCACAC
ATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGATG
AAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAGTACGC
ATCCACTATGCCCATTCCATCACAGTTACCATCCTAATACCACAATCACA
TGAACTAATCTAATGGATCAATCACCAGCGCGACTCTCTGATCTCCCAAC
TCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAA
CAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGA
ACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATC
TCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCG
GGTCAGGCAGAAGCAGATTACATGCTTGAAGAGCGGGGTCGGATTGATGA
GAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATG
AGAACTTCGGTCTGCAGCGTGAGACGCTGGCTAGTATCAACCGACGCATT
GTGGGCGCGGCGAACTCAGTGCCGGGCATGAATGCGTTGATTGGGAAGAT
TGGGTCTAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGT
TTTGCTTTTTGATGTTGCTTTGGTTGAGGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000282:488316..489147-

>ATCC10864_011485-T1 ID=ATCC10864_011485-T1|Name=ATCC10864_011485-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2052bp|location=Sequence derived from alignment at MCQH01000282:488316..489147- (Aspergillus niger ATCC 10864)
CGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGCAAC
CCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAG
TCCTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCTGCCATCGCC
GAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATATCGA
TGCCTACCGCAACTCGAACCCGGGTCAGGCAGAAGCAGATTACATGCTTG
AAGAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGATGGGGTGTTG
AGTCAGGCTTACGCTATTAATGAGAACTTCGGTCTGCAGCGTGAGACGCT
GGCTAGTATCAACCGACGCATTGTGGGCGCGGCGAACTCAGTGCCGGGCA
TGAATGCGTTGATTGGGAAGATTGGGTCTAAGAGGAGACGGGATGCGTTG
ATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAG
GTGAACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCGTTAACGA
AGCTCCCACCCACACCCTCGGATGAAGAACAGCGGATCGAATCGCAGCTC
AAAGACCTCCTAGAACGAATGGCCACCTCAACCGGTACCGGCTGGGCTCA
GCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGCGCGACTCTCTGATCT
CCCAACTCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCC
CTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCG
TCGTGAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCG
CTAATCTCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCG
AACCCGGGTCAGGCAGAAGCAGATTACATGCTTGAAGAGCGGGGTCGGAT
TGATGAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTA
TTAATGAGAACTTCGGTCTGCAGCGTGAGACGCTGGCTAGTATCAACCGA
CGCATTGTGGGCGCGGCGAACTCAGTGCCGGGCATGAATGCGTTGATTGG
GAAGATTGGGTCTAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTA
TTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAGGTGAACCGAGAACCTC
TTCCACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACC
CTCGGATGAAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAAC
GAATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCC
CGATCTCTCGAGACTCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCT
CCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACC
TCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGT
CTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAA
CGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCAG
AAGCAGATTACATGCTTGAAGAGCGGGGTCGGATTGATGAGAGCCATAAT
ATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTCGG
TCTGCAGCGTGAGACGCTGGCTAGTATCAACCGACGCATTGTGGGCGCGG
CGAACTCAGTGCCGGGCATGAATGCGTTGATTGGGAAGATTGGGTCTAAG
AGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTT
GATGTTGCTTTGGTTGAGGTGAACCGAGAACCTCTTCCACACATACTCTC
AATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGATGAAGAACAG
CGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAATGGCCACCTCAAC
CGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTC
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006888endoplasmic reticulum to Golgi vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0000139Golgi membrane
GO:0016021integral component of membrane
GO:0005801cis-Golgi network
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011485ATCC10864_011485Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011485-T1ATCC10864_011485-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011485-T1.cdsATCC10864_011485-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011485-T1.exon3ATCC10864_011485-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011485-T1.exon2ATCC10864_011485-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011485-T1.exon1ATCC10864_011485-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023601
PFAMPF12352
Properties
Property NameValue
NoteBUSCO:EOG09265AL8
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:488316..489147 -
Powered by Drupal