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ATCC10864_011486-T1, ATCC10864_011486-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011486-T1
Unique NameATCC10864_011486-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:489664..490589+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011486-T1 ID=ATCC10864_011486-T1|Name=ATCC10864_011486-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=926bp|location=Sequence derived from alignment at MCQH01000282:489664..490589+ (Aspergillus niger ATCC 10864)
ATGGTATGTTGAATGCGCCATGCTGCTATTCGCAGTTTTTGATTCTGCGT
GAAAAAAGTGAAATGCTGACGGGAGTTTTTCTATTTGAAGTCGTCCAAGG
TCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAG
CTGGAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGC
TGGCGGTGCCTCCTCGAAGACCCACAGAATGTGCGTTTGAAAAGAATTCA
TCTGATTTTCTCCTGCGAACCCCTCATGTGTGTGCGTTGTGTGTGGTGTG
TGAAGGATATGAGATTTGCACCTGTCGGATTGTGGATTACGGCGGGAGGA
AGGAAACGACAACGACATTCGACAATTGGAAAAATGAGACGACGCATACC
AGTCAAGAACAGAAATCCCGACAACCCATGAAATCGACCTACAATAAGGA
AACGAGGGGTACACGACCGAACGACAACAAGATCCAAGCCGAGAAGAAAC
TTTCCGACAGGGCGCAAAATCCAACATATCTACCACCTACATGAAAAAAT
GGGCACACATGCGCAGTGAACCAGGAACAAGAACAGGGATGCTGATATAC
CGTCTTTTAACAGCCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACC
GTCATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAA
GAAGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCC
GCCGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAG
CAGGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGTACGACCTGC
CCAACATACCTGAATATATGACCCCGCGGGGGAAAATATGAAGGACATTG
GCTAACTGAAATTGCAACAGGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000282:489664..490589+

>ATCC10864_011486-T1 ID=ATCC10864_011486-T1|Name=ATCC10864_011486-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1500bp|location=Sequence derived from alignment at MCQH01000282:489664..490589+ (Aspergillus niger ATCC 10864)
ATGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGA
CCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTG
TCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATCCACGAC
GTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCG
CGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACC
TCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAG
GCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCA
GCGGAAGTACGCTGTTAAGGCTTAAATGTCGTCCAAGGTCAAGGCTGGTC
AGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGAATTG
AAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTGCCTC
CTCGAAGACCCACAGAATCCACGACGTTCGCAAGTCGATCGCTCGCGTTC
TGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAG
AGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCT
CCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGC
GCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGCTTAA
ATGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGA
CCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTG
TCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATCCACGAC
GTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCG
CGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACC
TCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAG
GCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCA
GCGGAAGTACGCTGTTAAGGCTTAAATGTCGTCCAAGGTCAAGGCTGGTC
AGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGAATTG
AAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTGCCTC
CTCGAAGACCCACAGAATCCACGACGTTCGCAAGTCGATCGCTCGCGTTC
TGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAG
AGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCT
CCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGC
GCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL35ATCC10864_011486Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011486-T1.exon1ATCC10864_011486-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011486-T1.exon2ATCC10864_011486-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011486-T1.exon3ATCC10864_011486-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011486-T1.exon4ATCC10864_011486-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011486-T1.cdsATCC10864_011486-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011486-T1ATCC10864_011486-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036049
PFAMPF00831
InterProIPR001854
Properties
Property NameValue
NoteBUSCO:EOG09265FTY
Product60S ribosomal protein L35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:489664..490589 +
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