You are here

Home

ATCC10864_011506-T1, ATCC10864_011506-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011506-T1
Unique NameATCC10864_011506-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:560463..561519-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011506-T1 ID=ATCC10864_011506-T1|Name=ATCC10864_011506-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1057bp|location=Sequence derived from alignment at MCQH01000282:560463..561519- (Aspergillus niger ATCC 10864)
ATGACTACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGTGA
GGGCAAAAGTACGAGGCATCTCACCCGGTCATTGTGATAAGCTCTAACAG
ATCTACTTCAGCTCAAATCGCCGAATCTCTCCTCAGCGTACGTACTCCGA
AGCTGCCCCGCACCGCCATCAGGGAGCTCTATACAACCTCACTATTAGCT
CAAAGACCGTCTCGCTGATGGCTTCTAGGCCAACCCCAAGCTAGCAAATG
TCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAAC
CGTCTCCCGATCGTGGAGCTACTGATATCCAACAAGCACTTTGATCCCGA
TGTCGAGGTCCGTCATTGTCTCATTCTTTTGTAATATACCACGCCAGAGC
ATCACTAATATTTCCATAGGATGGCTCCGGCTGGACACCACTCATGATTG
CATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTTCTC
AAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCAGGCCAGGTACGCCC
CCTCCCTTCTTCCTAGGCCACCTTCTCCCTAACTTAATATCTGTGTCTAC
AATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTC
CGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGG
ACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCA
AGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCGACGGATGTTGAT
GGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGC
GATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATG
GCGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGTTCGTCTTCTTCCT
TTTTTATCATATATAAATCGAGGTGGGAGTGTGTGCTGATAGTGGTATGC
GTATAGGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGA
GTTATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000282:560463..561519-

>ATCC10864_011506-T1 ID=ATCC10864_011506-T1|Name=ATCC10864_011506-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4302bp|location=Sequence derived from alignment at MCQH01000282:560463..561519- (Aspergillus niger ATCC 10864)
GTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTATA
GAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCA
CCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACAG
CTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGAT
CCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCGACGGATGTTGATGGGC
TGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATT
ACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGCGT
TTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACAC
CACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATC
GATCTCCTTCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCAGG
CCAGGCCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTC
CCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATCGTGGAGCTACTG
ATATCCAACAAGCACTTTGATCCCGATGTCGAGCTCAAATCGCCGAATCT
CTCCTCAGCATGACTACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGC
TGCCCGTGAGGGCAAAAGTGCGGAGCTATATCCTGCAAACAGCGGAGAGG
GAGGGGATCGAGTTATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCAA
CCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAA
AGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCC
TCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGC
GACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTC
ACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAG
AGGGATTCGAATGGCGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGA
TGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCCG
AAGGCGATCCCATCATCGATCTCCTTCTCAAGAAAGGCGCAGACGTCAGC
ACGAAGAGCGTCTCAGGCCAGGCCAACCCCAAGCTAGCAAATGTCAAAGA
TGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTCC
CGATCGTGGAGCTACTGATATCCAACAAGCACTTTGATCCCGATGTCGAG
CTCAAATCGCCGAATCTCTCCTCAGCATGACTACCAGTCAGGAAGCTAAG
TTTCCTCTTCACGAGGCTGCCCGTGAGGGCAAAAGTGCGGAGCTATATCC
TGCAAACAGCGGAGAGGGAGGGGATCGAGTTATAGAACGCCCTCCACTTT
GCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACAA
ATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGAG
CAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGGG
AAGAGTCCCGTCAATGCGACGGATGTTGATGGGCTGACAGCTTTACATCA
TGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCTG
GTGCGGAGGCAGATAAGAGGGATTCGAATGGCGTTTTGGCCATTGATATG
GCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCATC
TAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTTCTCAAGA
AAGGCGCAGACGTCAGCACGAAGAGCGTCTCAGGCCAGGCCAACCCCAAG
CTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGT
AGCATACAACCGTCTCCCGATCGTGGAGCTACTGATATCCAACAAGCACT
TTGATCCCGATGTCGAGCTCAAATCGCCGAATCTCTCCTCAGCATGACTA
CCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGTGAGGGCAAA
AGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTAT
AGAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGC
ACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACA
GCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGA
TCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCGACGGATGTTGATGGG
CTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGAT
TACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGCG
TTTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACA
CCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCAT
CGATCTCCTTCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCAG
GCCAGGCCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTT
CCCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATCGTGGAGCTACT
GATATCCAACAAGCACTTTGATCCCGATGTCGAGCTCAAATCGCCGAATC
TCTCCTCAGCATGACTACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGG
CTGCCCGTGAGGGCAAAAGTGCGGAGCTATATCCTGCAAACAGCGGAGAG
GGAGGGGATCGAGTTATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCA
ACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTA
AAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATC
CTCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATG
CGACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGT
CACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAA
GAGGGATTCGAATGGCGTTTTGGCCATTGATATGGCGCCGGATAGCAAGG
ATGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCC
GAAGGCGATCCCATCATCGATCTCCTTCTCAAGAAAGGCGCAGACGTCAG
CACGAAGAGCGTCTCAGGCCAGGCCAACCCCAAGCTAGCAAATGTCAAAG
ATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTC
CCGATCGTGGAGCTACTGATATCCAACAAGCACTTTGATCCCGATGTCGA
GCTCAAATCGCCGAATCTCTCCTCAGCATGACTACCAGTCAGGAAGCTAA
GTTTCCTCTTCACGAGGCTGCCCGTGAGGGCAAAAGTGCGGAGCTATATC
CTGCAAACAGCGGAGAGGGAGGGGATCGAGTTATAGAACGCCCTCCACTT
TGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACA
AATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGA
GCAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGG
GAAGAGTCCCGTCAATGCGACGGATGTTGATGGGCTGACAGCTTTACATC
ATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCT
GGTGCGGAGGCAGATAAGAGGGATTCGAATGGCGTTTTGGCCATTGATAT
GGCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCAT
CTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTTCTCAAG
AAAGGCGCAGACGTCAGCACGAAGAGCGTCTCAGGCCAGGCCAACCCCAA
GCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGG
TAGCATACAACCGTCTCCCGATCGTGGAGCTACTGATATCCAACAAGCAC
TTTGATCCCGATGTCGAGCTCAAATCGCCGAATCTCTCCTCAGCATGACT
ACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGTGAGGGCAA
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011506ATCC10864_011506Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011506-T1ATCC10864_011506-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011506-T1.cdsATCC10864_011506-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011506-T1.exon6ATCC10864_011506-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_011506-T1.exon5ATCC10864_011506-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_011506-T1.exon4ATCC10864_011506-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011506-T1.exon3ATCC10864_011506-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011506-T1.exon2ATCC10864_011506-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011506-T1.exon1ATCC10864_011506-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13637
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:560463..561519 -
Powered by Drupal