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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000288:8789..9475+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011515-T1 ID=ATCC10864_011515-T1|Name=ATCC10864_011515-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=687bp|location=Sequence derived from alignment at MCQH01000288:8789..9475+ (Aspergillus niger ATCC 10864)
ATGAAGGTCACTGCAGCTTTTGCAAGTCTCTTGCTTACGGCCTTCGCGGC
CCCTGCTCCGGAGCCTGTTCTGGTGTCGCGAAGTGCCGGTATCAACTACG
TGCAGAACTACAACGGCAACCTTGGTGACTTCACCTACGACGAGAGTACC
GGGACATTTTCCATGTACTGGGAGGATGGAGTCAGTTCCGACTTCGTCGT
TGGTTTGGGCTGGACCACTGGCTCCTCTAAGTGGGTGACTGTACCCTTTA
GGCTAAATCTCTAGGATCTAACGGTTGTCAGATCTATCACCTACTCTGCC
CAATACAGCGCTTCTAGCTCCAGCTCCTACCTGGCTGTCTACGGCTGGGT
CAACTCTCCTCAGGCCGAATACTACATCGTCGAGGATTACGGTGATTACA
ACCCTTGCAGCTCGGCCACGAGCCTTGGTACCGTGTACTCTGATGGAAGC
ACCTACCAAGTCTGCACCGACACTCGGACGAACGCGCCATCTATCACAGG
AACAAGCACGTTCACGCAGTACTTCTCCGTTCGTGAAAGTACACGCACAT
CCGGAACAGTGACTATCGCCAACCATTTCAATTTCTGGGCGCAGCATGGG
TTCGGCAATAGCAACTTCAATTATCAGGTCATGGCGGTGGAGGCATGGAA
CGGTGCTGGCAGTGCCAGTGTCACGATATCTTCTTAA back to topCoding sequence (CDS) from alignment at MCQH01000288:8789..9475+ >ATCC10864_011515-T1 ID=ATCC10864_011515-T1|Name=ATCC10864_011515-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1272bp|location=Sequence derived from alignment at MCQH01000288:8789..9475+ (Aspergillus niger ATCC 10864)
ATGAAGGTCACTGCAGCTTTTGCAAGTCTCTTGCTTACGGCCTTCGCGGC
CCCTGCTCCGGAGCCTGTTCTGGTGTCGCGAAGTGCCGGTATCAACTACG
TGCAGAACTACAACGGCAACCTTGGTGACTTCACCTACGACGAGAGTACC
GGGACATTTTCCATGTACTGGGAGGATGGAGTCAGTTCCGACTTCGTCGT
TGGTTTGGGCTGGACCACTGGCTCCTCTAAATCTATCACCTACTCTGCCC
AATACAGCGCTTCTAGCTCCAGCTCCTACCTGGCTGTCTACGGCTGGGTC
AACTCTCCTCAGGCCGAATACTACATCGTCGAGGATTACGGTGATTACAA
CCCTTGCAGCTCGGCCACGAGCCTTGGTACCGTGTACTCTGATGGAAGCA
CCTACCAAGTCTGCACCGACACTCGGACGAACGCGCCATCTATCACAGGA
ACAAGCACGTTCACGCAGTACTTCTCCGTTCGTGAAAGTACACGCACATC
CGGAACAGTGACTATCGCCAACCATTTCAATTTCTGGGCGCAGCATGGGT
TCGGCAATAGCAACTTCAATTATCAGGTCATGGCGGTGGAGGCATGGAAC
GGTGCTGGCAGTGCCAGTGTCACGATATCTTCTTAAATGAAGGTCACTGC
AGCTTTTGCAAGTCTCTTGCTTACGGCCTTCGCGGCCCCTGCTCCGGAGC
CTGTTCTGGTGTCGCGAAGTGCCGGTATCAACTACGTGCAGAACTACAAC
GGCAACCTTGGTGACTTCACCTACGACGAGAGTACCGGGACATTTTCCAT
GTACTGGGAGGATGGAGTCAGTTCCGACTTCGTCGTTGGTTTGGGCTGGA
CCACTGGCTCCTCTAAATCTATCACCTACTCTGCCCAATACAGCGCTTCT
AGCTCCAGCTCCTACCTGGCTGTCTACGGCTGGGTCAACTCTCCTCAGGC
CGAATACTACATCGTCGAGGATTACGGTGATTACAACCCTTGCAGCTCGG
CCACGAGCCTTGGTACCGTGTACTCTGATGGAAGCACCTACCAAGTCTGC
ACCGACACTCGGACGAACGCGCCATCTATCACAGGAACAAGCACGTTCAC
GCAGTACTTCTCCGTTCGTGAAAGTACACGCACATCCGGAACAGTGACTA
TCGCCAACCATTTCAATTTCTGGGCGCAGCATGGGTTCGGCAATAGCAAC
TTCAATTATCAGGTCATGGCGGTGGAGGCATGGAACGGTGCTGGCAGTGC
CAGTGTCACGATATCTTCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR013319 |
| PFAM | PF00457 |
| InterPro | IPR013320 |
| InterPro | IPR033123 |
| InterPro | IPR018208 |
| InterPro | IPR001137 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH11 |
| Note | SECRETED:SignalP(1-16) |
| Product | 4-beta-xylanase 5 |
| Product | Endo-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000288 | supercontig | MCQH01000288:8789..9475 + |
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