|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000288:119737..121566+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011560-T1 ID=ATCC10864_011560-T1|Name=ATCC10864_011560-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1830bp|location=Sequence derived from alignment at MCQH01000288:119737..121566+ (Aspergillus niger ATCC 10864)
ATGGGGCTCGTTGCGGAAACCCGACAGGCCATCCGGGACTCCCCTCGGGG
GGTCTTTAACTGGTATTTGTTGATGAACATTGCCATTTTCGCGCTCTCCG
GCATCAGTAGGGGGTTTGATGAAGGTAGATAGTGAAGATCATATGTCATG
CAGGGTGCTGATCTTCGCAGCGAATATCGCATCGTTGGTCGTGCAATCTC
GGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCGACGAATATGCC
AATACCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGAATGACCTTGGG
CTGTCTGCTAGTAAGCTATCCACTCAGAAGGTAGATATATGTCGGGTTAA
CAGCTACTGTAGTGTTTACCTTTCAATGATCGAATTGGGCGGCGGTGGAC
GATGCGGCTATCGACCCTAGTATATGTCTCTGGAGTCTTGGGACAGGGCC
TCTGTAATGGAAACCTGTCCGGACTGTACGCATCGAGACTGATCGCGGGT
CTCGGGGTGGGCGGCTTGACTGTGACCCCACCGATGTATATCTCCGAGGT
ACCTAAATGATGCTTGAATGGGGACTGGGAACAGACTAACTTTGTTGCAG
GTAGCCCCTAAGACCATCCGCGGGCTCCTCGCAGTTCAATTTGCCGCATG
CCAGCAACTAGGGGTCGTTTTTGGGTTCTTTATCAACTATGGCATTACCA
AAAACTACGATGGAACAGATATGCAGTGGATGTTCCCCACCTTGATCCAA
CTGCTCCCTGCAGCAGTCTGGGGACTGGGACTCCTGATCTGTGAAGAATC
TCCCCGGTGGCTGCTGTACGTGGGCAGGCGAACTCAGGCAGTAGCGATAC
TTGCAAAGCTCCGCCACTTGCCCCCGAGCCACCCAACCGTAGTCGCAGAA
ATTGCTGTCATGGAATTCCAGATCCTGCAGGAGAGGGAAGCGGCCACGGG
CACCTCACAATGGGACCTATTCAAGGAGACGTTTGTCCCGGTGGAGAACC
GGCGTCGGTTCTGCCTCGTGATGCTGGCACATCTGTTTTCGCAATGGTCC
GGAGGCAATGCCATCACGCAATATTTGCCGACAATCTTGGGATACCTGGG
CACGTCCGGGGATACCTTGTCCCTAACCACGGGCGTCTATGCCGTGGTCA
AGTTCACCACCTTGCTGATCTTCTCACTTGTAGTGGTGGATTTTGTAGGC
CGACGGCGGTCTCTTATGGCGGGAATCACCCTCCAGATCCTGACGTTGGT
GTATCTCGCCTGTTATCTTGGGATATCCCGAGAGATGTCGACGACGACCC
TCCTGCACACGGCCAGCGCGACGCAGGCCTCGAAGGCGGCGATCGCAGCC
ATCTTTGTGCATGGGGTTGGGTGGGTGATCGGATGGTTCTCAATGCCCTT
CCTGATCGGATCGGAGATCTTTCCCATCCGGATCCGATCGCTGGCCTTGT
CGATGGGGATGGCGGGGCACTGGCTGTTCGCGTTTGGGTGCACGCGCGCG
ACGCCCGACTTGCTGGAGGTGATGGAGGAGTGGGGAGCCTTTGCCTTTTT
TGCGTGCATCTGCCTTGTGTCGCTGGTGTACGTGTTCTTTGCGATGCCGG
TAAGTGAACCCACTCCCCGATATGACGATGGAAGAAGGGAGAGACGTAAC
GGCGGGGGGTCTGACAGCGCACAGGACACAACGGGCCGATCGCTAGAGGC
ACTGGATGGACTGTTCCAACGACCGTGGTACACGGTTTATCAGGTAGCGT
ATGCGAAGGAGGAGGACGAGGAAATCGAGGTGCAAGCGATACAGGAACGG
GGAAAGTCGGAGTTGGGGATAGAAGCATAA back to topCoding sequence (CDS) from alignment at MCQH01000288:119737..121566+ >ATCC10864_011560-T1 ID=ATCC10864_011560-T1|Name=ATCC10864_011560-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=8025bp|location=Sequence derived from alignment at MCQH01000288:119737..121566+ (Aspergillus niger ATCC 10864)
ATGGGGCTCGTTGCGGAAACCCGACAGGCCATCCGGGACTCCCCTCGGGG
GGTCTTTAACTGGTATTTGTTGATGAACATTGCCATTTTCGCGCTCTCCG
GCATCAGTAGGGGGTTTGATGAAGCGAATATCGCATCGTTGGTCGTGCAA
TCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCGACGAATA
TGCCAATACCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGAATGACCT
TGGGCTGTCTGCTATGTTTACCTTTCAATGATCGAATTGGGCGGCGGTGG
ACGATGCGGCTATCGACCCTAGTATATGTCTCTGGAGTCTTGGGACAGGG
CCTCTGTAATGGAAACCTGTCCGGACTGTACGCATCGAGACTGATCGCGG
GTCTCGGGGTGGGCGGCTTGACTGTGACCCCACCGATGTATATCTCCGAG
GTAGCCCCTAAGACCATCCGCGGGCTCCTCGCAGTTCAATTTGCCGCATG
CCAGCAACTAGGGGTCGTTTTTGGGTTCTTTATCAACTATGGCATTACCA
AAAACTACGATGGAACAGATATGCAGTGGATGTTCCCCACCTTGATCCAA
CTGCTCCCTGCAGCAGTCTGGGGACTGGGACTCCTGATCTGTGAAGAATC
TCCCCGGTGGCTGCTGTACGTGGGCAGGCGAACTCAGGCAGTAGCGATAC
TTGCAAAGCTCCGCCACTTGCCCCCGAGCCACCCAACCGTAGTCGCAGAA
ATTGCTGTCATGGAATTCCAGATCCTGCAGGAGAGGGAAGCGGCCACGGG
CACCTCACAATGGGACCTATTCAAGGAGACGTTTGTCCCGGTGGAGAACC
GGCGTCGGTTCTGCCTCGTGATGCTGGCACATCTGTTTTCGCAATGGTCC
GGAGGCAATGCCATCACGCAATATTTGCCGACAATCTTGGGATACCTGGG
CACGTCCGGGGATACCTTGTCCCTAACCACGGGCGTCTATGCCGTGGTCA
AGTTCACCACCTTGCTGATCTTCTCACTTGTAGTGGTGGATTTTGTAGGC
CGACGGCGGTCTCTTATGGCGGGAATCACCCTCCAGATCCTGACGTTGGT
GTATCTCGCCTGTTATCTTGGGATATCCCGAGAGATGTCGACGACGACCC
TCCTGCACACGGCCAGCGCGACGCAGGCCTCGAAGGCGGCGATCGCAGCC
ATCTTTGTGCATGGGGTTGGGTGGGTGATCGGATGGTTCTCAATGCCCTT
CCTGATCGGATCGGAGATCTTTCCCATCCGGATCCGATCGCTGGCCTTGT
CGATGGGGATGGCGGGGCACTGGCTGTTCGCGTTTGGGTGCACGCGCGCG
ACGCCCGACTTGCTGGAGGTGATGGAGGAGTGGGGAGCCTTTGCCTTTTT
TGCGTGCATCTGCCTTGTGTCGCTGGTGTACGTGTTCTTTGCGATGCCGG
ACACAACGGGCCGATCGCTAGAGGCACTGGATGGACTGTTCCAACGACCG
TGGTACACGGTTTATCAGGTAGCGTATGCGAAGGAGGAGGACGAGGAAAT
CGAGGTGCAAGCGATACAGGAACGGGGAAAGTCGGAGTTGGGGATAGAAG
CATAAATGGGGCTCGTTGCGGAAACCCGACAGGCCATCCGGGACTCCCCT
CGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGCCATTTTCGCGCT
CTCCGGCATCAGTAGGGGGTTTGATGAAGCGAATATCGCATCGTTGGTCG
TGCAATCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCGAC
GAATATGCCAATACCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGAAT
GACCTTGGGCTGTCTGCTATGTTTACCTTTCAATGATCGAATTGGGCGGC
GGTGGACGATGCGGCTATCGACCCTAGTATATGTCTCTGGAGTCTTGGGA
CAGGGCCTCTGTAATGGAAACCTGTCCGGACTGTACGCATCGAGACTGAT
CGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACCCCACCGATGTATATCT
CCGAGGTAGCCCCTAAGACCATCCGCGGGCTCCTCGCAGTTCAATTTGCC
GCATGCCAGCAACTAGGGGTCGTTTTTGGGTTCTTTATCAACTATGGCAT
TACCAAAAACTACGATGGAACAGATATGCAGTGGATGTTCCCCACCTTGA
TCCAACTGCTCCCTGCAGCAGTCTGGGGACTGGGACTCCTGATCTGTGAA
GAATCTCCCCGGTGGCTGCTGTACGTGGGCAGGCGAACTCAGGCAGTAGC
GATACTTGCAAAGCTCCGCCACTTGCCCCCGAGCCACCCAACCGTAGTCG
CAGAAATTGCTGTCATGGAATTCCAGATCCTGCAGGAGAGGGAAGCGGCC
ACGGGCACCTCACAATGGGACCTATTCAAGGAGACGTTTGTCCCGGTGGA
GAACCGGCGTCGGTTCTGCCTCGTGATGCTGGCACATCTGTTTTCGCAAT
GGTCCGGAGGCAATGCCATCACGCAATATTTGCCGACAATCTTGGGATAC
CTGGGCACGTCCGGGGATACCTTGTCCCTAACCACGGGCGTCTATGCCGT
GGTCAAGTTCACCACCTTGCTGATCTTCTCACTTGTAGTGGTGGATTTTG
TAGGCCGACGGCGGTCTCTTATGGCGGGAATCACCCTCCAGATCCTGACG
TTGGTGTATCTCGCCTGTTATCTTGGGATATCCCGAGAGATGTCGACGAC
GACCCTCCTGCACACGGCCAGCGCGACGCAGGCCTCGAAGGCGGCGATCG
CAGCCATCTTTGTGCATGGGGTTGGGTGGGTGATCGGATGGTTCTCAATG
CCCTTCCTGATCGGATCGGAGATCTTTCCCATCCGGATCCGATCGCTGGC
CTTGTCGATGGGGATGGCGGGGCACTGGCTGTTCGCGTTTGGGTGCACGC
GCGCGACGCCCGACTTGCTGGAGGTGATGGAGGAGTGGGGAGCCTTTGCC
TTTTTTGCGTGCATCTGCCTTGTGTCGCTGGTGTACGTGTTCTTTGCGAT
GCCGGACACAACGGGCCGATCGCTAGAGGCACTGGATGGACTGTTCCAAC
GACCGTGGTACACGGTTTATCAGGTAGCGTATGCGAAGGAGGAGGACGAG
GAAATCGAGGTGCAAGCGATACAGGAACGGGGAAAGTCGGAGTTGGGGAT
AGAAGCATAAATGGGGCTCGTTGCGGAAACCCGACAGGCCATCCGGGACT
CCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGCCATTTTC
GCGCTCTCCGGCATCAGTAGGGGGTTTGATGAAGCGAATATCGCATCGTT
GGTCGTGCAATCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCC
CCGACGAATATGCCAATACCAAAGGTTGGATTGTGTCCATGTTCACGGCT
GGAATGACCTTGGGCTGTCTGCTATGTTTACCTTTCAATGATCGAATTGG
GCGGCGGTGGACGATGCGGCTATCGACCCTAGTATATGTCTCTGGAGTCT
TGGGACAGGGCCTCTGTAATGGAAACCTGTCCGGACTGTACGCATCGAGA
CTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACCCCACCGATGTA
TATCTCCGAGGTAGCCCCTAAGACCATCCGCGGGCTCCTCGCAGTTCAAT
TTGCCGCATGCCAGCAACTAGGGGTCGTTTTTGGGTTCTTTATCAACTAT
GGCATTACCAAAAACTACGATGGAACAGATATGCAGTGGATGTTCCCCAC
CTTGATCCAACTGCTCCCTGCAGCAGTCTGGGGACTGGGACTCCTGATCT
GTGAAGAATCTCCCCGGTGGCTGCTGTACGTGGGCAGGCGAACTCAGGCA
GTAGCGATACTTGCAAAGCTCCGCCACTTGCCCCCGAGCCACCCAACCGT
AGTCGCAGAAATTGCTGTCATGGAATTCCAGATCCTGCAGGAGAGGGAAG
CGGCCACGGGCACCTCACAATGGGACCTATTCAAGGAGACGTTTGTCCCG
GTGGAGAACCGGCGTCGGTTCTGCCTCGTGATGCTGGCACATCTGTTTTC
GCAATGGTCCGGAGGCAATGCCATCACGCAATATTTGCCGACAATCTTGG
GATACCTGGGCACGTCCGGGGATACCTTGTCCCTAACCACGGGCGTCTAT
GCCGTGGTCAAGTTCACCACCTTGCTGATCTTCTCACTTGTAGTGGTGGA
TTTTGTAGGCCGACGGCGGTCTCTTATGGCGGGAATCACCCTCCAGATCC
TGACGTTGGTGTATCTCGCCTGTTATCTTGGGATATCCCGAGAGATGTCG
ACGACGACCCTCCTGCACACGGCCAGCGCGACGCAGGCCTCGAAGGCGGC
GATCGCAGCCATCTTTGTGCATGGGGTTGGGTGGGTGATCGGATGGTTCT
CAATGCCCTTCCTGATCGGATCGGAGATCTTTCCCATCCGGATCCGATCG
CTGGCCTTGTCGATGGGGATGGCGGGGCACTGGCTGTTCGCGTTTGGGTG
CACGCGCGCGACGCCCGACTTGCTGGAGGTGATGGAGGAGTGGGGAGCCT
TTGCCTTTTTTGCGTGCATCTGCCTTGTGTCGCTGGTGTACGTGTTCTTT
GCGATGCCGGACACAACGGGCCGATCGCTAGAGGCACTGGATGGACTGTT
CCAACGACCGTGGTACACGGTTTATCAGGTAGCGTATGCGAAGGAGGAGG
ACGAGGAAATCGAGGTGCAAGCGATACAGGAACGGGGAAAGTCGGAGTTG
GGGATAGAAGCATAAATGGGGCTCGTTGCGGAAACCCGACAGGCCATCCG
GGACTCCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGCCA
TTTTCGCGCTCTCCGGCATCAGTAGGGGGTTTGATGAAGCGAATATCGCA
TCGTTGGTCGTGCAATCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCA
ATCCCCCGACGAATATGCCAATACCAAAGGTTGGATTGTGTCCATGTTCA
CGGCTGGAATGACCTTGGGCTGTCTGCTATGTTTACCTTTCAATGATCGA
ATTGGGCGGCGGTGGACGATGCGGCTATCGACCCTAGTATATGTCTCTGG
AGTCTTGGGACAGGGCCTCTGTAATGGAAACCTGTCCGGACTGTACGCAT
CGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACCCCACCG
ATGTATATCTCCGAGGTAGCCCCTAAGACCATCCGCGGGCTCCTCGCAGT
TCAATTTGCCGCATGCCAGCAACTAGGGGTCGTTTTTGGGTTCTTTATCA
ACTATGGCATTACCAAAAACTACGATGGAACAGATATGCAGTGGATGTTC
CCCACCTTGATCCAACTGCTCCCTGCAGCAGTCTGGGGACTGGGACTCCT
GATCTGTGAAGAATCTCCCCGGTGGCTGCTGTACGTGGGCAGGCGAACTC
AGGCAGTAGCGATACTTGCAAAGCTCCGCCACTTGCCCCCGAGCCACCCA
ACCGTAGTCGCAGAAATTGCTGTCATGGAATTCCAGATCCTGCAGGAGAG
GGAAGCGGCCACGGGCACCTCACAATGGGACCTATTCAAGGAGACGTTTG
TCCCGGTGGAGAACCGGCGTCGGTTCTGCCTCGTGATGCTGGCACATCTG
TTTTCGCAATGGTCCGGAGGCAATGCCATCACGCAATATTTGCCGACAAT
CTTGGGATACCTGGGCACGTCCGGGGATACCTTGTCCCTAACCACGGGCG
TCTATGCCGTGGTCAAGTTCACCACCTTGCTGATCTTCTCACTTGTAGTG
GTGGATTTTGTAGGCCGACGGCGGTCTCTTATGGCGGGAATCACCCTCCA
GATCCTGACGTTGGTGTATCTCGCCTGTTATCTTGGGATATCCCGAGAGA
TGTCGACGACGACCCTCCTGCACACGGCCAGCGCGACGCAGGCCTCGAAG
GCGGCGATCGCAGCCATCTTTGTGCATGGGGTTGGGTGGGTGATCGGATG
GTTCTCAATGCCCTTCCTGATCGGATCGGAGATCTTTCCCATCCGGATCC
GATCGCTGGCCTTGTCGATGGGGATGGCGGGGCACTGGCTGTTCGCGTTT
GGGTGCACGCGCGCGACGCCCGACTTGCTGGAGGTGATGGAGGAGTGGGG
AGCCTTTGCCTTTTTTGCGTGCATCTGCCTTGTGTCGCTGGTGTACGTGT
TCTTTGCGATGCCGGACACAACGGGCCGATCGCTAGAGGCACTGGATGGA
CTGTTCCAACGACCGTGGTACACGGTTTATCAGGTAGCGTATGCGAAGGA
GGAGGACGAGGAAATCGAGGTGCAAGCGATACAGGAACGGGGAAAGTCGG
AGTTGGGGATAGAAGCATAAATGGGGCTCGTTGCGGAAACCCGACAGGCC
ATCCGGGACTCCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACAT
TGCCATTTTCGCGCTCTCCGGCATCAGTAGGGGGTTTGATGAAGCGAATA
TCGCATCGTTGGTCGTGCAATCTCGGTTTCGGATCAAATTCGGGCTCGGC
CAGCAATCCCCCGACGAATATGCCAATACCAAAGGTTGGATTGTGTCCAT
GTTCACGGCTGGAATGACCTTGGGCTGTCTGCTATGTTTACCTTTCAATG
ATCGAATTGGGCGGCGGTGGACGATGCGGCTATCGACCCTAGTATATGTC
TCTGGAGTCTTGGGACAGGGCCTCTGTAATGGAAACCTGTCCGGACTGTA
CGCATCGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACCC
CACCGATGTATATCTCCGAGGTAGCCCCTAAGACCATCCGCGGGCTCCTC
GCAGTTCAATTTGCCGCATGCCAGCAACTAGGGGTCGTTTTTGGGTTCTT
TATCAACTATGGCATTACCAAAAACTACGATGGAACAGATATGCAGTGGA
TGTTCCCCACCTTGATCCAACTGCTCCCTGCAGCAGTCTGGGGACTGGGA
CTCCTGATCTGTGAAGAATCTCCCCGGTGGCTGCTGTACGTGGGCAGGCG
AACTCAGGCAGTAGCGATACTTGCAAAGCTCCGCCACTTGCCCCCGAGCC
ACCCAACCGTAGTCGCAGAAATTGCTGTCATGGAATTCCAGATCCTGCAG
GAGAGGGAAGCGGCCACGGGCACCTCACAATGGGACCTATTCAAGGAGAC
GTTTGTCCCGGTGGAGAACCGGCGTCGGTTCTGCCTCGTGATGCTGGCAC
ATCTGTTTTCGCAATGGTCCGGAGGCAATGCCATCACGCAATATTTGCCG
ACAATCTTGGGATACCTGGGCACGTCCGGGGATACCTTGTCCCTAACCAC
GGGCGTCTATGCCGTGGTCAAGTTCACCACCTTGCTGATCTTCTCACTTG
TAGTGGTGGATTTTGTAGGCCGACGGCGGTCTCTTATGGCGGGAATCACC
CTCCAGATCCTGACGTTGGTGTATCTCGCCTGTTATCTTGGGATATCCCG
AGAGATGTCGACGACGACCCTCCTGCACACGGCCAGCGCGACGCAGGCCT
CGAAGGCGGCGATCGCAGCCATCTTTGTGCATGGGGTTGGGTGGGTGATC
GGATGGTTCTCAATGCCCTTCCTGATCGGATCGGAGATCTTTCCCATCCG
GATCCGATCGCTGGCCTTGTCGATGGGGATGGCGGGGCACTGGCTGTTCG
CGTTTGGGTGCACGCGCGCGACGCCCGACTTGCTGGAGGTGATGGAGGAG
TGGGGAGCCTTTGCCTTTTTTGCGTGCATCTGCCTTGTGTCGCTGGTGTA
CGTGTTCTTTGCGATGCCGGACACAACGGGCCGATCGCTAGAGGCACTGG
ATGGACTGTTCCAACGACCGTGGTACACGGTTTATCAGGTAGCGTATGCG
AAGGAGGAGGACGAGGAAATCGAGGTGCAAGCGATACAGGAACGGGGAAA
GTCGGAGTTGGGGATAGAAGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF07690 |
| InterPro | IPR036259 |
| PFAM | PF00083 |
| InterPro | IPR020846 |
| InterPro | IPR005828 |
| InterPro | IPR003663 |
| InterPro | IPR005829 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000288 | supercontig | MCQH01000288:119737..121566 + |
|
