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ATCC10864_011568-T1, ATCC10864_011568-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011568-T1
Unique NameATCC10864_011568-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000288:139328..140499+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011568-T1 ID=ATCC10864_011568-T1|Name=ATCC10864_011568-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1172bp|location=Sequence derived from alignment at MCQH01000288:139328..140499+ (Aspergillus niger ATCC 10864)
ATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTGTCATGAGGCTGA
ACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAGTACGTCTCGCCCC
AAAGTACACCTGTTGCCGCTACTAGTCCATACTGATCTCAGTTACCCCTC
CATCCAGAGAATGTTATATTCGATTCTTGAACTTCAAGCCATTCAGGCGC
ATGGAACGGTATCGTCTCCGGAGGAATATGCCACAGACTGGTCCCTGCAA
ATTGCTGCTCCCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCACA
TGCTGCACCGGCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCGCG
GGCTTCGAAATCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCCGT
TCCTCCGCACGAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCTCT
GTTCCTTCACCCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGGAT
GTCCATCAAATCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGACAC
TTCGCTGTCCGATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTACAA
CAGCCACATCCAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTGTC
GTTGCTTTCGCAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGACTC
GGATAGCAAGCTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACGCG
GCTCTGCAGTGACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCCTA
GAATTCAACTTCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACCTA
TGCCACCCTCTTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCCTC
CCTCAGAGAATACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGATC
CGTTATGTCAGCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAACGT
AACTAGGACTGCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGGAC
TGCAGTGCAATTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCACG
GGCGAACAAGGCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGGTC
CCAACCCGAATTGAGCTGTTAA
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Coding sequence (CDS) from alignment at MCQH01000288:139328..140499+

>ATCC10864_011568-T1 ID=ATCC10864_011568-T1|Name=ATCC10864_011568-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2202bp|location=Sequence derived from alignment at MCQH01000288:139328..140499+ (Aspergillus niger ATCC 10864)
ATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTGTCATGAGGCTGA
ACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAAGAATGTTATATTC
GATTCTTGAACTTCAAGCCATTCAGGCGCATGGAACGGTATCGTCTCCGG
AGGAATATGCCACAGACTGGTCCCTGCAAATTGCTGCTCCCCCTTTCGTA
CGGCGTCTCCTCCACTGTGCTATTGCACATGCTGCACCGGCAGTTGGAGG
CACTACGCTCAAAAAAACATGGTCCCGCGGGCTTCGAAATCCTCGTCCTC
GTCGTTGAGCCTTCGACAATCTCCCCCGTTCCTCCGCACGAAGAAGGCTT
TGCACTCGCGCAGCAGACCTTCCCGCTCTGTTCCTTCACCCGGCTCCCCT
TCCACAGTATCTTCGAGCTTGACCCGGATGTCCATCAAATCATGTCGCAG
TATGCCGGGGAGCACTTCACAGATGACACTTCGCTGTCCGATGAGGAGCG
TTTGAATCGCTTCCGCAGGTCGATTACAACAGCCACATCCAAGTCCGATG
TCGACCAAATTTTGTTGAACAAACTTGTCGTTGCTTTCGCAAAGAAAATG
GAATGCCGCGGCATAGTATGGGGTGACTCGGATAGCAAGCTCGCTGCAAA
GACCCTCGCCAACGTCGCGAAAGGACGCGGCTCTGCAGTGACGTGGCAGG
TGTGCGATGGAATGTCGCCTTTTGGCCTAGAATTCAACTTCCCGCTTCGG
GACGTGTTCACGGCAGAGATACGCACCTATGCCACCCTCTTTCCCGAGCT
GGCTGGCATCATCGTTCATGACGAGCCTCCCTCAGAGAATACGCTTACCA
AGAATCTGTCGATCGATGAGCTGATGATCCGTTATGTCAGCACTCAGGGT
GAGAAATACCCCGGCGTCATGTTGAACGTAACTAGGACTGCCAGTAAGCT
CCAGTCGTCTGGTACATCTATCGGCGGACTGCAGTGCAATTTCTGCGGGG
CCTTCATGACTACAAATGAGAATATCACGGGCGAACAAGGCAACGAACAG
CTTCAATTCTGCTATGCCTGTGCTCGGTCCCAACCCGAATTGAGCTGTTA
AATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTGTCATGAGGCTG
AACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAAGAATGTTATATT
CGATTCTTGAACTTCAAGCCATTCAGGCGCATGGAACGGTATCGTCTCCG
GAGGAATATGCCACAGACTGGTCCCTGCAAATTGCTGCTCCCCCTTTCGT
ACGGCGTCTCCTCCACTGTGCTATTGCACATGCTGCACCGGCAGTTGGAG
GCACTACGCTCAAAAAAACATGGTCCCGCGGGCTTCGAAATCCTCGTCCT
CGTCGTTGAGCCTTCGACAATCTCCCCCGTTCCTCCGCACGAAGAAGGCT
TTGCACTCGCGCAGCAGACCTTCCCGCTCTGTTCCTTCACCCGGCTCCCC
TTCCACAGTATCTTCGAGCTTGACCCGGATGTCCATCAAATCATGTCGCA
GTATGCCGGGGAGCACTTCACAGATGACACTTCGCTGTCCGATGAGGAGC
GTTTGAATCGCTTCCGCAGGTCGATTACAACAGCCACATCCAAGTCCGAT
GTCGACCAAATTTTGTTGAACAAACTTGTCGTTGCTTTCGCAAAGAAAAT
GGAATGCCGCGGCATAGTATGGGGTGACTCGGATAGCAAGCTCGCTGCAA
AGACCCTCGCCAACGTCGCGAAAGGACGCGGCTCTGCAGTGACGTGGCAG
GTGTGCGATGGAATGTCGCCTTTTGGCCTAGAATTCAACTTCCCGCTTCG
GGACGTGTTCACGGCAGAGATACGCACCTATGCCACCCTCTTTCCCGAGC
TGGCTGGCATCATCGTTCATGACGAGCCTCCCTCAGAGAATACGCTTACC
AAGAATCTGTCGATCGATGAGCTGATGATCCGTTATGTCAGCACTCAGGG
TGAGAAATACCCCGGCGTCATGTTGAACGTAACTAGGACTGCCAGTAAGC
TCCAGTCGTCTGGTACATCTATCGGCGGACTGCAGTGCAATTTCTGCGGG
GCCTTCATGACTACAAATGAGAATATCACGGGCGAACAAGGCAACGAACA
GCTTCAATTCTGCTATGCCTGTGCTCGGTCCCAACCCGAATTGAGCTGTT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
GO:0034227tRNA thio-modification
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS2ATCC10864_011568Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011568-T1.exon1ATCC10864_011568-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011568-T1.exon2ATCC10864_011568-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011568-T1.cdsATCC10864_011568-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011568-T1ATCC10864_011568-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019407
InterProIPR014729
Properties
Property NameValue
Productcytoplasmic tRNA 2-thiolation protein 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000288supercontigMCQH01000288:139328..140499 +
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