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ATCC10864_011571-T1, ATCC10864_011571-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011571-T1
Unique NameATCC10864_011571-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000288:145311..146648+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011571-T1 ID=ATCC10864_011571-T1|Name=ATCC10864_011571-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1338bp|location=Sequence derived from alignment at MCQH01000288:145311..146648+ (Aspergillus niger ATCC 10864)
ATGATGCGCTCCAGCCCATCTACACGCACAATATGTGCGCAATGCCTCAG
TCGCAATCGTCACTTCTCCACGACCATCCAGCGTTGCGCCCCACGATCCA
GCACCCCGAACCCTCCCTCCCCGCCAGCAACCGGATATGCACGTCTCACG
AACCGCGGATTAATCTCCATAACGGGCATAGATAGCACCTCATATCTCCA
AGGCTTAATCACGCAGAACATGCTCATTACGAACGACCCGAACCGCCCGA
CCCGTCGAACGGGCTCTTACACTGCCTTCCTGAACTCCCAAGGCCGCGTG
CTCAACGACGCCTTCCTCTACCCACTGCCCCAGGCAGAGGGCACTTCACC
GGACGAACATGCGTGGCTTGTAGAGGTGGACAAGAGCGAAGTCACGGGTC
TCCTGAAGCATCTCAAAAAACACAAACTCCGCGCGAAACTGAAGCTACGT
GCCCTGGATGAGGGAGAACGCACTGTGTGGGCCTCATGGAAGGACCATAG
TGAACCGCGGTGGGCAGCGTACAATCTGGATTCTCAGTCTTTTTCACCCT
TTGCCTCGTCCTCCGCGACGGTCACCGGGTGTGTGGATACCCGCGCACCA
GGATTTGGATCCAGGCTCATCACGCCGGGAGAGGGAGACTTGACGACGCA
TCTGGCGGGGGCAGAAGGAGAGGGGTATGGATCGGAGGTGGATCTGGGCT
CTTACACCGTGCGACGGATGTTACATGGCGTTGCGGAAGGGCAGTCGGAG
ATCATTCGCGAGTCCGCACTTCCGTTGGAGTCGAACATGGATATGATGCG
GGGCATTGATTTCCGCAAGGGATGCTATGTCGGTCAGGAACTTACGATCC
GGACCCATCATACTGGTGTTGTGAGAAAGCGTATACTTCCGGTTCAGTTG
TATGAAGGGAGTCTAGGGGATTTGGAATCGGCCGATATGCCCGTGTACGA
CCCCTCTGTGGAGGTGGAGTTGCCGCCATCCGGGTCGAATATTTCCAAGG
TCAGCGCGCGCAAGGGCCGTAGTGCGGGCAAGTTCTTAGGTGGTGTTGGA
AACATCGGACTTGCTTTGTGTCGGTTGGAGATGATGACGGATGTTGCTTT
GACTGGGGAGGGAACTCAATATAGTCCTGATCAGGAGTTCAAGGTCTCAT
GGACTGGAGCCGAAGATGGATCATCTGAGTCTGGCGAGGTGAAGTTGAAA
GCACTTGTCCCGGCTTGGACGAGAGAGTACATCTCCAATGGTGGAGTGAA
GAAAAATCAGGGCCGTAACCTAGAACTGGAGGGACAACGGGCCAGGGAAC
TGTTGGAACAATTGGAGGAAGAGGAGTCCTCACGATGA
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Coding sequence (CDS) from alignment at MCQH01000288:145311..146648+

>ATCC10864_011571-T1 ID=ATCC10864_011571-T1|Name=ATCC10864_011571-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1338bp|location=Sequence derived from alignment at MCQH01000288:145311..146648+ (Aspergillus niger ATCC 10864)
ATGATGCGCTCCAGCCCATCTACACGCACAATATGTGCGCAATGCCTCAG
TCGCAATCGTCACTTCTCCACGACCATCCAGCGTTGCGCCCCACGATCCA
GCACCCCGAACCCTCCCTCCCCGCCAGCAACCGGATATGCACGTCTCACG
AACCGCGGATTAATCTCCATAACGGGCATAGATAGCACCTCATATCTCCA
AGGCTTAATCACGCAGAACATGCTCATTACGAACGACCCGAACCGCCCGA
CCCGTCGAACGGGCTCTTACACTGCCTTCCTGAACTCCCAAGGCCGCGTG
CTCAACGACGCCTTCCTCTACCCACTGCCCCAGGCAGAGGGCACTTCACC
GGACGAACATGCGTGGCTTGTAGAGGTGGACAAGAGCGAAGTCACGGGTC
TCCTGAAGCATCTCAAAAAACACAAACTCCGCGCGAAACTGAAGCTACGT
GCCCTGGATGAGGGAGAACGCACTGTGTGGGCCTCATGGAAGGACCATAG
TGAACCGCGGTGGGCAGCGTACAATCTGGATTCTCAGTCTTTTTCACCCT
TTGCCTCGTCCTCCGCGACGGTCACCGGGTGTGTGGATACCCGCGCACCA
GGATTTGGATCCAGGCTCATCACGCCGGGAGAGGGAGACTTGACGACGCA
TCTGGCGGGGGCAGAAGGAGAGGGGTATGGATCGGAGGTGGATCTGGGCT
CTTACACCGTGCGACGGATGTTACATGGCGTTGCGGAAGGGCAGTCGGAG
ATCATTCGCGAGTCCGCACTTCCGTTGGAGTCGAACATGGATATGATGCG
GGGCATTGATTTCCGCAAGGGATGCTATGTCGGTCAGGAACTTACGATCC
GGACCCATCATACTGGTGTTGTGAGAAAGCGTATACTTCCGGTTCAGTTG
TATGAAGGGAGTCTAGGGGATTTGGAATCGGCCGATATGCCCGTGTACGA
CCCCTCTGTGGAGGTGGAGTTGCCGCCATCCGGGTCGAATATTTCCAAGG
TCAGCGCGCGCAAGGGCCGTAGTGCGGGCAAGTTCTTAGGTGGTGTTGGA
AACATCGGACTTGCTTTGTGTCGGTTGGAGATGATGACGGATGTTGCTTT
GACTGGGGAGGGAACTCAATATAGTCCTGATCAGGAGTTCAAGGTCTCAT
GGACTGGAGCCGAAGATGGATCATCTGAGTCTGGCGAGGTGAAGTTGAAA
GCACTTGTCCCGGCTTGGACGAGAGAGTACATCTCCAATGGTGGAGTGAA
GAAAAATCAGGGCCGTAACCTAGAACTGGAGGGACAACGGGCCAGGGAAC
TGTTGGAACAATTGGAGGAAGAGGAGTCCTCACGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAF17ATCC10864_011571Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011571-T1.exon1ATCC10864_011571-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011571-T1.cdsATCC10864_011571-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011571-T1ATCC10864_011571-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR017703
InterProIPR027266
Properties
Property NameValue
NoteBUSCO:EOG092620V3
Productccr4 associated factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000288supercontigMCQH01000288:145311..146648 +
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