You are here

Home

ATCC10864_011606-T1, ATCC10864_011606-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011606-T1
Unique NameATCC10864_011606-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000289:79925..81649-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011606-T1 ID=ATCC10864_011606-T1|Name=ATCC10864_011606-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1725bp|location=Sequence derived from alignment at MCQH01000289:79925..81649- (Aspergillus niger ATCC 10864)
ATGGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAG
GGATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGA
AATGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAG
GATGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGAC
GAGAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCC
AAATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCC
CCGCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTA
CTACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATC
TCCAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTAT
AAGAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAG
CGATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGA
GGACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGG
GATGCCTACGAGAAGTATGAGCGGGCCGTTCCGTACAGCGACTCCGAAGA
CGATGGCGGCGCATCTGATTCCAGCGCCTCGTCCACGGTTTACGTGAAGG
TTAAGCGCCCCTCGGAAAGGCGCAACCGGGAGTCATCTTCTCGCAAGTCC
CGACCGGCTGACCTCCCGCGCCGCCATACCTCGACCCGCTACGAAGACGA
GTACACGGACGACTATGAGTCGAAGCATGACAAGCTACACCACACCGCCA
AAGATTACATTAGGCGCTCCAAGGGAACCGTTCCGATCGAAATCGACAGA
CGTCCACAAGCGTCCCGCTCGCCCCCGCGCAATCATGGCTACGAATCCGC
TGATCCGGAGTCTTCCTCGTCACGACACTCGGGCCGCACGAAACGACCGA
GCAAGGAAAGTGTTCGTACAAGTAATTCTCGCAATGGATCATACGAGAAG
CTTGAGGCCCAGGCCCGGTCCTACGACGTCAAGATACCTAGCATACCGAC
TACGGCAACTTCACCGTCAGTGAAGATTCCTTCATCGGTCCGGCCATCCC
TCCAGCCCTCACGCTCTGCGAGCGCTGCACAATCCTATTCCCGCGCCAGG
GGAATGAGTCGGGAAAATCCACTGCATAACATGGTCCATGAAGCGAGTCG
GACAGCGAAACTGCGAACGGACAAGTACGATTCCGGCTACTCGAGTCCAG
GCACGCCAGAAATGGCAGCCGGCGAGAGTCCGCCCAAGTCGACTCGCTAC
AAGATTGTGACGGAACCGGACACCGTGCTTAGAGAACCCAGTATACCACT
ACCCCAGAAGTCCCCAAGATACGCAAGGGGGGGTTCACCGCCACATCAAG
AGCGCCCTATGCCGAAGCCTCCCGTTCGGAGTAGCACCTACACCTACCCC
ACAGAACACATGCGCTATGAGTCCGCGGCTCGTCCCAGTATGTCCCGGCA
ATCCTCGAGCCGGCCTACGTATGGTGAGATCCGTTCGCCCAAGGACAAAG
AGTACAGGTATGCGCGAGAGGTGGGGCCAGATTACATCCCATCCCGCGAT
GCTTACATGCGACAGCCATACGGGGAGTACCCGGTTCCGCCCCCCGAACG
GCGGCAATCCACATATGCTGGATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000289:79925..81649-

>ATCC10864_011606-T1 ID=ATCC10864_011606-T1|Name=ATCC10864_011606-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1725bp|location=Sequence derived from alignment at MCQH01000289:79925..81649- (Aspergillus niger ATCC 10864)
ATGGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAG
GGATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGA
AATGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAG
GATGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGAC
GAGAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCC
AAATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCC
CCGCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTA
CTACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATC
TCCAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTAT
AAGAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAG
CGATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGA
GGACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGG
GATGCCTACGAGAAGTATGAGCGGGCCGTTCCGTACAGCGACTCCGAAGA
CGATGGCGGCGCATCTGATTCCAGCGCCTCGTCCACGGTTTACGTGAAGG
TTAAGCGCCCCTCGGAAAGGCGCAACCGGGAGTCATCTTCTCGCAAGTCC
CGACCGGCTGACCTCCCGCGCCGCCATACCTCGACCCGCTACGAAGACGA
GTACACGGACGACTATGAGTCGAAGCATGACAAGCTACACCACACCGCCA
AAGATTACATTAGGCGCTCCAAGGGAACCGTTCCGATCGAAATCGACAGA
CGTCCACAAGCGTCCCGCTCGCCCCCGCGCAATCATGGCTACGAATCCGC
TGATCCGGAGTCTTCCTCGTCACGACACTCGGGCCGCACGAAACGACCGA
GCAAGGAAAGTGTTCGTACAAGTAATTCTCGCAATGGATCATACGAGAAG
CTTGAGGCCCAGGCCCGGTCCTACGACGTCAAGATACCTAGCATACCGAC
TACGGCAACTTCACCGTCAGTGAAGATTCCTTCATCGGTCCGGCCATCCC
TCCAGCCCTCACGCTCTGCGAGCGCTGCACAATCCTATTCCCGCGCCAGG
GGAATGAGTCGGGAAAATCCACTGCATAACATGGTCCATGAAGCGAGTCG
GACAGCGAAACTGCGAACGGACAAGTACGATTCCGGCTACTCGAGTCCAG
GCACGCCAGAAATGGCAGCCGGCGAGAGTCCGCCCAAGTCGACTCGCTAC
AAGATTGTGACGGAACCGGACACCGTGCTTAGAGAACCCAGTATACCACT
ACCCCAGAAGTCCCCAAGATACGCAAGGGGGGGTTCACCGCCACATCAAG
AGCGCCCTATGCCGAAGCCTCCCGTTCGGAGTAGCACCTACACCTACCCC
ACAGAACACATGCGCTATGAGTCCGCGGCTCGTCCCAGTATGTCCCGGCA
ATCCTCGAGCCGGCCTACGTATGGTGAGATCCGTTCGCCCAAGGACAAAG
AGTACAGGTATGCGCGAGAGGTGGGGCCAGATTACATCCCATCCCGCGAT
GCTTACATGCGACAGCCATACGGGGAGTACCCGGTTCCGCCCCCCGAACG
GCGGCAATCCACATATGCTGGATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011606ATCC10864_011606Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011606-T1.cdsATCC10864_011606-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011606-T1.exon1ATCC10864_011606-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011606-T1ATCC10864_011606-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00226
InterProIPR001623
InterProIPR036869
InterProIPR018253
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000289supercontigMCQH01000289:79925..81649 -
Powered by Drupal