You are here

Home

ATCC10864_011613-T1, ATCC10864_011613-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011613-T1
Unique NameATCC10864_011613-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000292:6132..7624-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011613-T1 ID=ATCC10864_011613-T1|Name=ATCC10864_011613-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1493bp|location=Sequence derived from alignment at MCQH01000292:6132..7624- (Aspergillus niger ATCC 10864)
ATGCTCAAATCCACTGCATCTTCCTCGCTGTCCCTGGCGGAAGGCCATTA
CATCTATGCGATTACTCCCGCATCCCCGGAGTCGTTCGCAGTGATATCAT
CGGATGATTCGCTTCGCGTATTTGACGCTAACAGGCTCGACCATGCGACC
GTCATCGCGGCGAGTGCTCATGAGGGCGTCACGTCTCTAAAGACATATGA
TGCTAACCAGCAGGTGCTGGCCACGGCAGGAAGAGACAACAAGGTAAAGC
TGTGGGATCTGCGCAGCGGCAAGAAGGGTGCTGTTGTGGAGTTGGAGACA
TGTAAGCCCTCCCTCCCCCAGAAATTCCTCTCATATTGTCTCCTATATCT
ATGCACAACTCTCATGATTACCCAATGCTAACCTTCCCAACAGCGAAACA
AGCCCCCATATTATCTGTCGCCTGCTGCCCCGAAGTCCACGGAGTCGCAG
CCGGAACAGAGCTCGTTTCATACCAAGCCATCGTCGCCTTCTGGTAAGCC
AGCAGCTCACAATATGCGCACAAATCTCCCCACAAAGTACTACAGTATAA
ATTCACGAGCTGCTAACTGACGCCCCAGGGACACAAGATCCCCCGGCCAA
ACAAGCCTGCAATACGTGGAGAGCCACAACGACGACGTAACAGAGGTATA
ACCCAACCCAATCCAACCCAGATCTTCCATCCACACAAATGACCGACACC
ACTGACATAAAACCCCAGCTCCAATACCACCCCACCAATCCGACCCTCTT
CCTCTCCGGCAGCACAGACGGTCTAGTAAACATCTACAACACAACCATCA
CCGACGAAGACGAGGCCTTGGTTCAAGTAATCAACCACGGCTCCGTGCAC
CACGCCGGATTCCTCAGCAACAACACCATCTACGCACTCAGCCATGACGA
GGTATTCTCCGTGCACCCGGCGACTGACCCCGATGATGCGGCCCAGGAGC
CAAGTCCCATTCAGTTCGGGGATTTGAGGCAGCCGCTGGGGTGTGAGTAT
ATTGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTATGTTGCTGGGGGAAA
CAAGGAGTATGTTTATCCCTTCCCCCACCTTTTCTCTTTTGGATTTTGTT
GTGGATGATGATGATGTTAACGAGTACTGTAACCTGGTGTAGGGAGAACC
GTCTTGATCTTATTCCGCTTGTTTCGGAGCCCTCGTGGAGATTCGATCAG
GAGAATCTGTGGAGGTTGCCTGGGGCGCATGGCGAGGAGGTGGTAAGGTC
GGTGTATCTTGATGAGAAGGTGTGTATCACTTCTGAATATGATGTTTACG
GGATTGATTGGATGGATGGAGCTGACGATAACAACTATAGTCGCACTCTG
TGTTTACGTGCGGAGAGGATGGGGTTGTTCGTGCGTGGAAGCCTGAGGGT
GAGGGGCAGGGAGGTGCTCAGGCGGAAGAGGCTGCGAAGGGATCCCGTAA
GGAGAAAAAGAATAGGGAGAAGGGGAGGTTTAAGCCGTACTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000292:6132..7624-

>ATCC10864_011613-T1 ID=ATCC10864_011613-T1|Name=ATCC10864_011613-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6516bp|location=Sequence derived from alignment at MCQH01000292:6132..7624- (Aspergillus niger ATCC 10864)
TCGCACTCTGTGTTTACGTGCGGAGAGGATGGGGTTGTTCGTGCGTGGAA
GCCTGAGGGTGAGGGGCAGGGAGGTGCTCAGGCGGAAGAGGCTGCGAAGG
GATCCCGTAAGGAGAAAAAGAATAGGGAGAAGGGGAGGTTTAAGCCGTAC
TAGGGAGAACCGTCTTGATCTTATTCCGCTTGTTTCGGAGCCCTCGTGGA
GATTCGATCAGGAGAATCTGTGGAGGTTGCCTGGGGCGCATGGCGAGGAG
GTGGTAAGGTCGGTGTATCTTGATGAGAAGCTCCAATACCACCCCACCAA
TCCGACCCTCTTCCTCTCCGGCAGCACAGACGGTCTAGTAAACATCTACA
ACACAACCATCACCGACGAAGACGAGGCCTTGGTTCAAGTAATCAACCAC
GGCTCCGTGCACCACGCCGGATTCCTCAGCAACAACACCATCTACGCACT
CAGCCATGACGAGGTATTCTCCGTGCACCCGGCGACTGACCCCGATGATG
CGGCCCAGGAGCCAAGTCCCATTCAGTTCGGGGATTTGAGGCAGCCGCTG
GGGTGTGAGTATATTGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTATGT
TGCTGGGGGAAACAAGGAGGACACAAGATCCCCCGGCCAAACAAGCCTGC
AATACGTGGAGAGCCACAACGACGACGTAACAGAGCGAAACAAGCCCCCA
TATTATCTGTCGCCTGCTGCCCCGAAGTCCACGGAGTCGCAGCCGGAACA
GAGCTCGTTTCATACCAAGCCATCGTCGCCTTCTGATGCTCAAATCCACT
GCATCTTCCTCGCTGTCCCTGGCGGAAGGCCATTACATCTATGCGATTAC
TCCCGCATCCCCGGAGTCGTTCGCAGTGATATCATCGGATGATTCGCTTC
GCGTATTTGACGCTAACAGGCTCGACCATGCGACCGTCATCGCGGCGAGT
GCTCATGAGGGCGTCACGTCTCTAAAGACATATGATGCTAACCAGCAGGT
GCTGGCCACGGCAGGAAGAGACAACAAGGTAAAGCTGTGGGATCTGCGCA
GCGGCAAGAAGGGTGCTGTTGTGGAGTTGGAGACATTCGCACTCTGTGTT
TACGTGCGGAGAGGATGGGGTTGTTCGTGCGTGGAAGCCTGAGGGTGAGG
GGCAGGGAGGTGCTCAGGCGGAAGAGGCTGCGAAGGGATCCCGTAAGGAG
AAAAAGAATAGGGAGAAGGGGAGGTTTAAGCCGTACTAGGGAGAACCGTC
TTGATCTTATTCCGCTTGTTTCGGAGCCCTCGTGGAGATTCGATCAGGAG
AATCTGTGGAGGTTGCCTGGGGCGCATGGCGAGGAGGTGGTAAGGTCGGT
GTATCTTGATGAGAAGCTCCAATACCACCCCACCAATCCGACCCTCTTCC
TCTCCGGCAGCACAGACGGTCTAGTAAACATCTACAACACAACCATCACC
GACGAAGACGAGGCCTTGGTTCAAGTAATCAACCACGGCTCCGTGCACCA
CGCCGGATTCCTCAGCAACAACACCATCTACGCACTCAGCCATGACGAGG
TATTCTCCGTGCACCCGGCGACTGACCCCGATGATGCGGCCCAGGAGCCA
AGTCCCATTCAGTTCGGGGATTTGAGGCAGCCGCTGGGGTGTGAGTATAT
TGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTATGTTGCTGGGGGAAACA
AGGAGGACACAAGATCCCCCGGCCAAACAAGCCTGCAATACGTGGAGAGC
CACAACGACGACGTAACAGAGCGAAACAAGCCCCCATATTATCTGTCGCC
TGCTGCCCCGAAGTCCACGGAGTCGCAGCCGGAACAGAGCTCGTTTCATA
CCAAGCCATCGTCGCCTTCTGATGCTCAAATCCACTGCATCTTCCTCGCT
GTCCCTGGCGGAAGGCCATTACATCTATGCGATTACTCCCGCATCCCCGG
AGTCGTTCGCAGTGATATCATCGGATGATTCGCTTCGCGTATTTGACGCT
AACAGGCTCGACCATGCGACCGTCATCGCGGCGAGTGCTCATGAGGGCGT
CACGTCTCTAAAGACATATGATGCTAACCAGCAGGTGCTGGCCACGGCAG
GAAGAGACAACAAGGTAAAGCTGTGGGATCTGCGCAGCGGCAAGAAGGGT
GCTGTTGTGGAGTTGGAGACATTCGCACTCTGTGTTTACGTGCGGAGAGG
ATGGGGTTGTTCGTGCGTGGAAGCCTGAGGGTGAGGGGCAGGGAGGTGCT
CAGGCGGAAGAGGCTGCGAAGGGATCCCGTAAGGAGAAAAAGAATAGGGA
GAAGGGGAGGTTTAAGCCGTACTAGGGAGAACCGTCTTGATCTTATTCCG
CTTGTTTCGGAGCCCTCGTGGAGATTCGATCAGGAGAATCTGTGGAGGTT
GCCTGGGGCGCATGGCGAGGAGGTGGTAAGGTCGGTGTATCTTGATGAGA
AGCTCCAATACCACCCCACCAATCCGACCCTCTTCCTCTCCGGCAGCACA
GACGGTCTAGTAAACATCTACAACACAACCATCACCGACGAAGACGAGGC
CTTGGTTCAAGTAATCAACCACGGCTCCGTGCACCACGCCGGATTCCTCA
GCAACAACACCATCTACGCACTCAGCCATGACGAGGTATTCTCCGTGCAC
CCGGCGACTGACCCCGATGATGCGGCCCAGGAGCCAAGTCCCATTCAGTT
CGGGGATTTGAGGCAGCCGCTGGGGTGTGAGTATATTGCGCAGGTGTGTG
TGGGAAGTCAGGGGGCGTATGTTGCTGGGGGAAACAAGGAGGACACAAGA
TCCCCCGGCCAAACAAGCCTGCAATACGTGGAGAGCCACAACGACGACGT
AACAGAGCGAAACAAGCCCCCATATTATCTGTCGCCTGCTGCCCCGAAGT
CCACGGAGTCGCAGCCGGAACAGAGCTCGTTTCATACCAAGCCATCGTCG
CCTTCTGATGCTCAAATCCACTGCATCTTCCTCGCTGTCCCTGGCGGAAG
GCCATTACATCTATGCGATTACTCCCGCATCCCCGGAGTCGTTCGCAGTG
ATATCATCGGATGATTCGCTTCGCGTATTTGACGCTAACAGGCTCGACCA
TGCGACCGTCATCGCGGCGAGTGCTCATGAGGGCGTCACGTCTCTAAAGA
CATATGATGCTAACCAGCAGGTGCTGGCCACGGCAGGAAGAGACAACAAG
GTAAAGCTGTGGGATCTGCGCAGCGGCAAGAAGGGTGCTGTTGTGGAGTT
GGAGACATTCGCACTCTGTGTTTACGTGCGGAGAGGATGGGGTTGTTCGT
GCGTGGAAGCCTGAGGGTGAGGGGCAGGGAGGTGCTCAGGCGGAAGAGGC
TGCGAAGGGATCCCGTAAGGAGAAAAAGAATAGGGAGAAGGGGAGGTTTA
AGCCGTACTAGGGAGAACCGTCTTGATCTTATTCCGCTTGTTTCGGAGCC
CTCGTGGAGATTCGATCAGGAGAATCTGTGGAGGTTGCCTGGGGCGCATG
GCGAGGAGGTGGTAAGGTCGGTGTATCTTGATGAGAAGCTCCAATACCAC
CCCACCAATCCGACCCTCTTCCTCTCCGGCAGCACAGACGGTCTAGTAAA
CATCTACAACACAACCATCACCGACGAAGACGAGGCCTTGGTTCAAGTAA
TCAACCACGGCTCCGTGCACCACGCCGGATTCCTCAGCAACAACACCATC
TACGCACTCAGCCATGACGAGGTATTCTCCGTGCACCCGGCGACTGACCC
CGATGATGCGGCCCAGGAGCCAAGTCCCATTCAGTTCGGGGATTTGAGGC
AGCCGCTGGGGTGTGAGTATATTGCGCAGGTGTGTGTGGGAAGTCAGGGG
GCGTATGTTGCTGGGGGAAACAAGGAGGACACAAGATCCCCCGGCCAAAC
AAGCCTGCAATACGTGGAGAGCCACAACGACGACGTAACAGAGCGAAACA
AGCCCCCATATTATCTGTCGCCTGCTGCCCCGAAGTCCACGGAGTCGCAG
CCGGAACAGAGCTCGTTTCATACCAAGCCATCGTCGCCTTCTGATGCTCA
AATCCACTGCATCTTCCTCGCTGTCCCTGGCGGAAGGCCATTACATCTAT
GCGATTACTCCCGCATCCCCGGAGTCGTTCGCAGTGATATCATCGGATGA
TTCGCTTCGCGTATTTGACGCTAACAGGCTCGACCATGCGACCGTCATCG
CGGCGAGTGCTCATGAGGGCGTCACGTCTCTAAAGACATATGATGCTAAC
CAGCAGGTGCTGGCCACGGCAGGAAGAGACAACAAGGTAAAGCTGTGGGA
TCTGCGCAGCGGCAAGAAGGGTGCTGTTGTGGAGTTGGAGACATTCGCAC
TCTGTGTTTACGTGCGGAGAGGATGGGGTTGTTCGTGCGTGGAAGCCTGA
GGGTGAGGGGCAGGGAGGTGCTCAGGCGGAAGAGGCTGCGAAGGGATCCC
GTAAGGAGAAAAAGAATAGGGAGAAGGGGAGGTTTAAGCCGTACTAGGGA
GAACCGTCTTGATCTTATTCCGCTTGTTTCGGAGCCCTCGTGGAGATTCG
ATCAGGAGAATCTGTGGAGGTTGCCTGGGGCGCATGGCGAGGAGGTGGTA
AGGTCGGTGTATCTTGATGAGAAGCTCCAATACCACCCCACCAATCCGAC
CCTCTTCCTCTCCGGCAGCACAGACGGTCTAGTAAACATCTACAACACAA
CCATCACCGACGAAGACGAGGCCTTGGTTCAAGTAATCAACCACGGCTCC
GTGCACCACGCCGGATTCCTCAGCAACAACACCATCTACGCACTCAGCCA
TGACGAGGTATTCTCCGTGCACCCGGCGACTGACCCCGATGATGCGGCCC
AGGAGCCAAGTCCCATTCAGTTCGGGGATTTGAGGCAGCCGCTGGGGTGT
GAGTATATTGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTATGTTGCTGG
GGGAAACAAGGAGGACACAAGATCCCCCGGCCAAACAAGCCTGCAATACG
TGGAGAGCCACAACGACGACGTAACAGAGCGAAACAAGCCCCCATATTAT
CTGTCGCCTGCTGCCCCGAAGTCCACGGAGTCGCAGCCGGAACAGAGCTC
GTTTCATACCAAGCCATCGTCGCCTTCTGATGCTCAAATCCACTGCATCT
TCCTCGCTGTCCCTGGCGGAAGGCCATTACATCTATGCGATTACTCCCGC
ATCCCCGGAGTCGTTCGCAGTGATATCATCGGATGATTCGCTTCGCGTAT
TTGACGCTAACAGGCTCGACCATGCGACCGTCATCGCGGCGAGTGCTCAT
GAGGGCGTCACGTCTCTAAAGACATATGATGCTAACCAGCAGGTGCTGGC
CACGGCAGGAAGAGACAACAAGGTAAAGCTGTGGGATCTGCGCAGCGGCA
AGAAGGGTGCTGTTGTGGAGTTGGAGACATTCGCACTCTGTGTTTACGTG
CGGAGAGGATGGGGTTGTTCGTGCGTGGAAGCCTGAGGGTGAGGGGCAGG
GAGGTGCTCAGGCGGAAGAGGCTGCGAAGGGATCCCGTAAGGAGAAAAAG
AATAGGGAGAAGGGGAGGTTTAAGCCGTACTAGGGAGAACCGTCTTGATC
TTATTCCGCTTGTTTCGGAGCCCTCGTGGAGATTCGATCAGGAGAATCTG
TGGAGGTTGCCTGGGGCGCATGGCGAGGAGGTGGTAAGGTCGGTGTATCT
TGATGAGAAGCTCCAATACCACCCCACCAATCCGACCCTCTTCCTCTCCG
GCAGCACAGACGGTCTAGTAAACATCTACAACACAACCATCACCGACGAA
GACGAGGCCTTGGTTCAAGTAATCAACCACGGCTCCGTGCACCACGCCGG
ATTCCTCAGCAACAACACCATCTACGCACTCAGCCATGACGAGGTATTCT
CCGTGCACCCGGCGACTGACCCCGATGATGCGGCCCAGGAGCCAAGTCCC
ATTCAGTTCGGGGATTTGAGGCAGCCGCTGGGGTGTGAGTATATTGCGCA
GGTGTGTGTGGGAAGTCAGGGGGCGTATGTTGCTGGGGGAAACAAGGAGG
ACACAAGATCCCCCGGCCAAACAAGCCTGCAATACGTGGAGAGCCACAAC
GACGACGTAACAGAGCGAAACAAGCCCCCATATTATCTGTCGCCTGCTGC
CCCGAAGTCCACGGAGTCGCAGCCGGAACAGAGCTCGTTTCATACCAAGC
CATCGTCGCCTTCTGATGCTCAAATCCACTGCATCTTCCTCGCTGTCCCT
GGCGGAAGGCCATTACATCTATGCGATTACTCCCGCATCCCCGGAGTCGT
TCGCAGTGATATCATCGGATGATTCGCTTCGCGTATTTGACGCTAACAGG
CTCGACCATGCGACCGTCATCGCGGCGAGTGCTCATGAGGGCGTCACGTC
TCTAAAGACATATGATGCTAACCAGCAGGTGCTGGCCACGGCAGGAAGAG
ACAACAAGGTAAAGCTGTGGGATCTGCGCAGCGGCAAGAAGGGTGCTGTT
GTGGAGTTGGAGACAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011613ATCC10864_011613Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011613-T1ATCC10864_011613-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011613-T1.cdsATCC10864_011613-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011613-T1.exon6ATCC10864_011613-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_011613-T1.exon5ATCC10864_011613-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_011613-T1.exon4ATCC10864_011613-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011613-T1.exon3ATCC10864_011613-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011613-T1.exon2ATCC10864_011613-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011613-T1.exon1ATCC10864_011613-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR039328
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000292supercontigMCQH01000292:6132..7624 -
Powered by Drupal