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ATCC10864_011617-T1, ATCC10864_011617-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011617-T1
Unique NameATCC10864_011617-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000292:18552..22187-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011617-T1 ID=ATCC10864_011617-T1|Name=ATCC10864_011617-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=3636bp|location=Sequence derived from alignment at MCQH01000292:18552..22187- (Aspergillus niger ATCC 10864)
ATGAATATTCATGACGCTGATGAGCGCCCGTTGAAGAAGAGGCGCTTTTT
CGTGGATGATGAAGATCTCGCCACTCCCCAACCATCCACTGATTCTGTCA
CAGCAAGTCTCACGCCCGATTCCTCGTCCCTGACCGGCCAAGATGCCCAG
CCACAGCCTACACGATCTAAAAATGGCCCGGAAAATACAAAAGCACTTTT
GATGGATGATTCTACGCGGGTCGAGGATCATGCTGTGCCACATGTGGAGC
AAGAGATCGTGCAAGCGGAACACCACAATGCAGATTCGAGGACAGAGGGT
GCCCTACTACAGGTGGACTACGACGGGTTCGATATATCGACGTTCACAAG
TATTATAGGGGAAAACCTCTCGGCAGATTCAATACAAAGAATCCGAAGCG
CTGCTGGTGACGACCTTGAACGGGCGGTCAACATCTACTTCGATGGCTCT
TGGAAGAAATCCCCAACTCCTCGTGCTCAGAATCAGACTACTCTTACGGC
TCGCCAACGCCCGCTTCCTGCACAACCCCATAAGATCGCTACTCCCCTGT
CAGCAGCCTATAAACCACACACCCAGACCCTACCGCCTGACAAGGTCACA
TCTCGCCCTGCGACTCAGCCTCCCTTAAGATACATAGGTGCGTTTGGTGT
TGGAGCCTGGGCTACAAGGAGTGGAGCTGGATTCCTCAGACATGGGGATC
ATGTAAATATTGAGCGTACACGGTCCCAGCCGCTCTCGAAGCGGAACCGT
GCCGGGAAGCTGGTTTCTAATCAGAAGAGTGACGTTCTCACCCGGTTTAC
CACTAAATCAGGGCAGGAAATAGGAAGATTGCCCCGGGAAACAGCTGAAT
GGGTCTCAACCCTGCTGGATCAAAGGGTGTGTACATTTGAAGGTGTATGC
GTATACGTGCCGGACCGGGTCCGGGTGAATGACACCATCTATCTGCAGCT
GCGATGCTACTTGCGCATCGAGGCATTCCAGCCACGGATATTCAGTCAAT
CGATGGATGACAATAGGTCCGTTGCAATCTTCGAGGAGAAAGAAAGTGCA
GATGAGAAAGCACTGCGGCTCCGCCAAGTGGCTCTTGTGAAGCTGTTTGA
TGAAATCCATCTTCAACCGACATCCGTCAATGACATGACGAGAAATCATA
AGAAAGAAGGGTTGCTTCGTGCGGCGGAAATGGCTGAACAGCGCGAGCGA
GTGAAAAAAGAAAATCAAACAAATGACGACTCTTCGGAGGAGGACAGCCC
TGAGCTTGAAGAGGATCAGCTTGATACCCTCTATAAGAAGGCTCAGTCGT
TCGATTTTAGCATGCCTGAAGCAGAACCTGCCTCGTCATTCACCTTGCAT
CTTCGAAAATATCAGAGGCAGGCACTATACTGGATGCTCGCAAAGGAAAA
GGACAATAAGTCTGCAAGGGAGACGTCGCTGCATCCCTTATGGGAGGAGT
ACAGTTGGCCGTCCAGGGATGTCGACGACAAAGAACTCCCAGTTGTGGCT
GGCATTGACCACTTTTACGTCAACCCTTACTCTGGCGAGCTTAGCCTTGA
CTTCCCTGTCCAAGAGCAGCATTGCCTTGGGGGGATCCTGGCAGATGAAA
TGGGCCTGGGTAAGACGATTGAGATGCTCAGTTTGGTCCACTCTCATCGC
ATTATGCCTCAGAAGCCCACTGATCTTGTGAGGTTGCCTCAGTCGGCTTC
CGGGGTCGTACCCGCACCATATACCACTCTTGTGATTGCGCCCACATCCC
TTCTCTCGCAGTGGGAAAGTGAAGCACTGAAGGCTTCGCAGCCGGGAACA
ATGAACGTCCTTATGTATTACGGGGCGGACAAGAATATCAATCTCAAAAA
CCTCTGCGCTTCGGGAAATGCTGCTGCCCCCAATTTAATCATAACCAGCT
ATGGCGTTGTTCTCTCGGAATACCGTCAGCACATGTCCGCGTTGCTCTCA
TCTATGAGCTCCGGTGGCCTATTTTCCGTGGACTTCTTCCGCGTTATCGT
CGATGAAGCTCATGTAATCAAGAACCGTCTGTCAAAGACAGCCAAGGCGT
GCTATGAGCTCAAGGCAACCCATCGTTGGGTGTTGACAGGAACTCCCATC
GTTAATCGCCTGGAGGACCTGTTCAGCCTTGTGAGATTTCTCAAGGTCGA
GCCATGGAATAACTTCTCATTCTGGAAGACATTCATTACCGTGCCTTTTG
AGTCCAAGGACTATGTGCGCGCCCTGAACGTTGTGCAGAGCGTGCTGGAG
CCCCTGGTCCTCCGACGTACGAAGACAATGAAGACCCCCGAGGGTGAACC
TTTAGTGCCTTTACCACGTCGCACCATCACAATAGAAGAAGTCGAACTTC
CAGACCAGGAGCGGGAGATTTATGATCTTATCTTTACACGGGCAAAGCAG
ACGTTCAATCACAATGTCGAAGCTGGCACTCTGTTGAAGTCCTATTCAAC
AATCTTCGCACAAATTCTCCGCCTCCGCCAGACCTGCTGTCATCCTATCC
TCACACGCAACAAAGCGATAGTTGCAGACGAGGAAGATGCAGCAGCGGCT
GCTGACGCGGCCAACGACCTCAAGGACGACATGGATCTTCAAGATCTCAT
TGATCGCTTCAAGGCATCCACCGAAGCAGCCGAATCCAACGAGCCTCAGG
ATCCATCCGCCAAGTTCACTGCTCATGCATTGAAACAAATCCAAAACGAA
GCCAGCGGCGAATGTCCCATTTGCTCGGAAGAGCCCATGATTGACCCTGC
CGTCACGGCCTGCTGGCACAGTGCATGCAAGAAATGTTTGGAGGACTACA
TCCGCCACCAAACCGATAAGGGCATGGACCCTCGGTGCTTTTCATGCCGA
GCACCCACCACGTCGCGAGACATCTTCGAAGTCGTTCGTCATGAAAGCCC
TAATACCACACCCGAAGACGATATATATAGCAGTACTCCAACCCCCTCTC
AAGCGCCTCCCCGAATAAGCCTCCGCCGTATCCACCCTCTTTCGCCGTCT
GCCCATACATCTGCCAAAGTGCATGCCCTTCTCGCTCATCTTGCCCGCGT
CCCTGCTAATACCAAATCCGTCGTCTTTTCCCAATTTACCAGTTTCCTCG
ACCTCATTTCCCCCCAACTCACCCGTGCGGGTATCCATCACGTCCGTCTG
GATGGTACCATGCCGCACAAAGCCCGTGCGGAAACCCTCGCGCAATTCAA
CCGGGTCGAAACCTTTGCCGACCAAAATGAAATTGACAACGATGTCGACG
CCAACGATTCCACCCAGCTTCCCCTCTCCAGGGCAAAGCACAGACACTCG
ACCGCCCCGCCCCCTCCTACGGTTCTTCTTATCAGTCTCCGCGCCGGAGG
TGTGGGTCTTAATCTCACGGCAGCTAGTAATGTCTTCATGATGGATCCTT
GGTGGAGCTTTGCAATTGAGGCTCAGGCTATTGATCGGGTTCATCGCATG
GGTCAGACACGGGATGTGCAAGTGACACGGTTCGTGGTGAAGGACTCCAT
CGAGGGAAGAATGTTGAGGGTACAGGAACGGAAGATGAATATTGCAGGGT
CTTTAGGACTGAGGGTTGGCGGAGATGGCTCCGAGGATGACAAGAAGAAG
GAAAGAATCGAGGAGTTGAGGTTGTTATTTGAATAG
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Coding sequence (CDS) from alignment at MCQH01000292:18552..22187-

>ATCC10864_011617-T1 ID=ATCC10864_011617-T1|Name=ATCC10864_011617-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3636bp|location=Sequence derived from alignment at MCQH01000292:18552..22187- (Aspergillus niger ATCC 10864)
ATGAATATTCATGACGCTGATGAGCGCCCGTTGAAGAAGAGGCGCTTTTT
CGTGGATGATGAAGATCTCGCCACTCCCCAACCATCCACTGATTCTGTCA
CAGCAAGTCTCACGCCCGATTCCTCGTCCCTGACCGGCCAAGATGCCCAG
CCACAGCCTACACGATCTAAAAATGGCCCGGAAAATACAAAAGCACTTTT
GATGGATGATTCTACGCGGGTCGAGGATCATGCTGTGCCACATGTGGAGC
AAGAGATCGTGCAAGCGGAACACCACAATGCAGATTCGAGGACAGAGGGT
GCCCTACTACAGGTGGACTACGACGGGTTCGATATATCGACGTTCACAAG
TATTATAGGGGAAAACCTCTCGGCAGATTCAATACAAAGAATCCGAAGCG
CTGCTGGTGACGACCTTGAACGGGCGGTCAACATCTACTTCGATGGCTCT
TGGAAGAAATCCCCAACTCCTCGTGCTCAGAATCAGACTACTCTTACGGC
TCGCCAACGCCCGCTTCCTGCACAACCCCATAAGATCGCTACTCCCCTGT
CAGCAGCCTATAAACCACACACCCAGACCCTACCGCCTGACAAGGTCACA
TCTCGCCCTGCGACTCAGCCTCCCTTAAGATACATAGGTGCGTTTGGTGT
TGGAGCCTGGGCTACAAGGAGTGGAGCTGGATTCCTCAGACATGGGGATC
ATGTAAATATTGAGCGTACACGGTCCCAGCCGCTCTCGAAGCGGAACCGT
GCCGGGAAGCTGGTTTCTAATCAGAAGAGTGACGTTCTCACCCGGTTTAC
CACTAAATCAGGGCAGGAAATAGGAAGATTGCCCCGGGAAACAGCTGAAT
GGGTCTCAACCCTGCTGGATCAAAGGGTGTGTACATTTGAAGGTGTATGC
GTATACGTGCCGGACCGGGTCCGGGTGAATGACACCATCTATCTGCAGCT
GCGATGCTACTTGCGCATCGAGGCATTCCAGCCACGGATATTCAGTCAAT
CGATGGATGACAATAGGTCCGTTGCAATCTTCGAGGAGAAAGAAAGTGCA
GATGAGAAAGCACTGCGGCTCCGCCAAGTGGCTCTTGTGAAGCTGTTTGA
TGAAATCCATCTTCAACCGACATCCGTCAATGACATGACGAGAAATCATA
AGAAAGAAGGGTTGCTTCGTGCGGCGGAAATGGCTGAACAGCGCGAGCGA
GTGAAAAAAGAAAATCAAACAAATGACGACTCTTCGGAGGAGGACAGCCC
TGAGCTTGAAGAGGATCAGCTTGATACCCTCTATAAGAAGGCTCAGTCGT
TCGATTTTAGCATGCCTGAAGCAGAACCTGCCTCGTCATTCACCTTGCAT
CTTCGAAAATATCAGAGGCAGGCACTATACTGGATGCTCGCAAAGGAAAA
GGACAATAAGTCTGCAAGGGAGACGTCGCTGCATCCCTTATGGGAGGAGT
ACAGTTGGCCGTCCAGGGATGTCGACGACAAAGAACTCCCAGTTGTGGCT
GGCATTGACCACTTTTACGTCAACCCTTACTCTGGCGAGCTTAGCCTTGA
CTTCCCTGTCCAAGAGCAGCATTGCCTTGGGGGGATCCTGGCAGATGAAA
TGGGCCTGGGTAAGACGATTGAGATGCTCAGTTTGGTCCACTCTCATCGC
ATTATGCCTCAGAAGCCCACTGATCTTGTGAGGTTGCCTCAGTCGGCTTC
CGGGGTCGTACCCGCACCATATACCACTCTTGTGATTGCGCCCACATCCC
TTCTCTCGCAGTGGGAAAGTGAAGCACTGAAGGCTTCGCAGCCGGGAACA
ATGAACGTCCTTATGTATTACGGGGCGGACAAGAATATCAATCTCAAAAA
CCTCTGCGCTTCGGGAAATGCTGCTGCCCCCAATTTAATCATAACCAGCT
ATGGCGTTGTTCTCTCGGAATACCGTCAGCACATGTCCGCGTTGCTCTCA
TCTATGAGCTCCGGTGGCCTATTTTCCGTGGACTTCTTCCGCGTTATCGT
CGATGAAGCTCATGTAATCAAGAACCGTCTGTCAAAGACAGCCAAGGCGT
GCTATGAGCTCAAGGCAACCCATCGTTGGGTGTTGACAGGAACTCCCATC
GTTAATCGCCTGGAGGACCTGTTCAGCCTTGTGAGATTTCTCAAGGTCGA
GCCATGGAATAACTTCTCATTCTGGAAGACATTCATTACCGTGCCTTTTG
AGTCCAAGGACTATGTGCGCGCCCTGAACGTTGTGCAGAGCGTGCTGGAG
CCCCTGGTCCTCCGACGTACGAAGACAATGAAGACCCCCGAGGGTGAACC
TTTAGTGCCTTTACCACGTCGCACCATCACAATAGAAGAAGTCGAACTTC
CAGACCAGGAGCGGGAGATTTATGATCTTATCTTTACACGGGCAAAGCAG
ACGTTCAATCACAATGTCGAAGCTGGCACTCTGTTGAAGTCCTATTCAAC
AATCTTCGCACAAATTCTCCGCCTCCGCCAGACCTGCTGTCATCCTATCC
TCACACGCAACAAAGCGATAGTTGCAGACGAGGAAGATGCAGCAGCGGCT
GCTGACGCGGCCAACGACCTCAAGGACGACATGGATCTTCAAGATCTCAT
TGATCGCTTCAAGGCATCCACCGAAGCAGCCGAATCCAACGAGCCTCAGG
ATCCATCCGCCAAGTTCACTGCTCATGCATTGAAACAAATCCAAAACGAA
GCCAGCGGCGAATGTCCCATTTGCTCGGAAGAGCCCATGATTGACCCTGC
CGTCACGGCCTGCTGGCACAGTGCATGCAAGAAATGTTTGGAGGACTACA
TCCGCCACCAAACCGATAAGGGCATGGACCCTCGGTGCTTTTCATGCCGA
GCACCCACCACGTCGCGAGACATCTTCGAAGTCGTTCGTCATGAAAGCCC
TAATACCACACCCGAAGACGATATATATAGCAGTACTCCAACCCCCTCTC
AAGCGCCTCCCCGAATAAGCCTCCGCCGTATCCACCCTCTTTCGCCGTCT
GCCCATACATCTGCCAAAGTGCATGCCCTTCTCGCTCATCTTGCCCGCGT
CCCTGCTAATACCAAATCCGTCGTCTTTTCCCAATTTACCAGTTTCCTCG
ACCTCATTTCCCCCCAACTCACCCGTGCGGGTATCCATCACGTCCGTCTG
GATGGTACCATGCCGCACAAAGCCCGTGCGGAAACCCTCGCGCAATTCAA
CCGGGTCGAAACCTTTGCCGACCAAAATGAAATTGACAACGATGTCGACG
CCAACGATTCCACCCAGCTTCCCCTCTCCAGGGCAAAGCACAGACACTCG
ACCGCCCCGCCCCCTCCTACGGTTCTTCTTATCAGTCTCCGCGCCGGAGG
TGTGGGTCTTAATCTCACGGCAGCTAGTAATGTCTTCATGATGGATCCTT
GGTGGAGCTTTGCAATTGAGGCTCAGGCTATTGATCGGGTTCATCGCATG
GGTCAGACACGGGATGTGCAAGTGACACGGTTCGTGGTGAAGGACTCCAT
CGAGGGAAGAATGTTGAGGGTACAGGAACGGAAGATGAATATTGCAGGGT
CTTTAGGACTGAGGGTTGGCGGAGATGGCTCCGAGGATGACAAGAAGAAG
GAAAGAATCGAGGAGTTGAGGTTGTTATTTGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0070615nucleosome-dependent ATPase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAD5ATCC10864_011617Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011617-T1.cdsATCC10864_011617-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011617-T1.exon1ATCC10864_011617-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011617-T1ATCC10864_011617-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038718
InterProIPR001841
PFAMPF08797
PFAMPF00271
InterProIPR000330
InterProIPR013083
PFAMPF00176
InterProIPR001650
InterProIPR027417
InterProIPR014905
InterProIPR014001
Properties
Property NameValue
ProductDNA helicase rad5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000292supercontigMCQH01000292:18552..22187 -
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