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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000292:23255..25069+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011618-T1 ID=ATCC10864_011618-T1|Name=ATCC10864_011618-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1815bp|location=Sequence derived from alignment at MCQH01000292:23255..25069+ (Aspergillus niger ATCC 10864)
ATGCTCCTTGCTCGCCTCTGGCCGGCGTGCCTCACGCTGCTCGTGGCCGG
GGCCGCCGCCGTTAAGGTCAATCCTTTACCAGCTCCGCGCAACATTTCTT
GGACTTCTTCGGGTCCTAAGCAGCTGGCAAGCTTTGTCAGTCTCCGTGCA
TCGCAAGATACCCCCGACTTCATTCTCGCCAATGGATGGAATCGCGCATG
GGATTCTATTGTCTCCTTACAATGGGTACCCGCAGCGACCGAAGGCCCCA
TGTCATCCTATCAACCTTTTCCCACCGCGACGGCCGCGGCCGGGGTCACT
AAACGGTCCTCGCAGGCACTGCCATCGCTGCAGTTTGTTGATGTGAATGT
GGCTGATCTTGACGCGGATTTGCAGCATGGAGTTGACGAGTCTTACACAC
TGGAGGTCACCGAGAGCGCTACTTCAGTCGTCATCGAGGCACCCACTGTC
TGGGGAGCACTCCATGCCTTTACTACTCTCCAGCAGCTGGTCATCTCTGA
CGGACAGGGCGGCTTGATAATTGAGCAGTCAGTTAAGATCCAGGATGCGC
CGCTCTATCCTTACCGGGGTATCATGCTTGATACTGGTCGAAATTTTATC
TCAGTTAGCAAGATCTATGAGCAGCTGGACGGCATGTCGCTTTCTAAGCT
CAATGTTCTACACTGGCACATGGAAGACACCCAATCGTGGCCAGTGCAGA
TTGATGCCTATCCAGAGATGATCCATGATGCCTACTCCCCGCGCGAGGTA
TATTCACACGCCGACATGCGCAACATCGTAGCGTATGCCCGAGCACGCGG
CGTACGGGTCATTCCTGAGATTGATATGCCCAGCCATTCCGCTTCGGGTT
GGAAACAGGTTGACCCCCAGATGGTCACCTGCGTGGATTCCTGGTGGTCT
AATGATGATTATGCCTTGCATACCGCGGTAGAACCCCCACCCGGTCAAAT
GGACATCATTTACAACGGCACATATGATGTGGTCCGAGAGGTATATAATG
AGCTGTCCAGCATCTTCCCGGACAACTGGTTCCATGTTGGAGCGGATGAG
ATTCAGCCGAACTGCTTTAACTTCAGCAGCTACGTCACCCAGTGGTTCGC
AGAGGATCCGTCGCGCACTTACAATGATCTGGCCCAGTACTGGGTAGACC
ACGCTGTACCGATCTTCCAGAACTACAGTTCCTCGCGCCAGCTGGTTATG
TGGGAAGATATCGTGCTATCTACGGAACATGCGCATGATGTACCCACAAA
CATCGTGATGCAAACCTGGAACAACGGGCTGGATTACATCAATCAGCTGA
CTGCCAAAGGCTACGATGTGATTGTGTCATCATCGGACTTCATGTATCTG
GACTGTGGGATGGGTGGCTTCCTAACCAATGATCCCCGATACGATGTAAT
GAGCAATCCAGATCCAAACACTCCCAACTTCAACTATGGCGGCAACGGAG
GCTCGTGGTGTGCGCCGTACAAGACGTGGCAGCGTATCTACGACTATGAC
TTCACGCAAAATCTGACTGACGCCCAGGCCCAGCACATCGTGGGCGCGGA
GGCACCCCTCTGGTCGGAACAAGTAGATGATGTGACTGTCTCCAGTCTGT
TCTGGCCGCGCGCCGCTGCTCTGGCAGAGCTGGTATGGTCTGGGAATCGG
GATGAGAATGGACATAAGCGCACGACGCTGATGACGCAGCGTATTTTGAA
CTTTCGCGAGTACTTGGTGGCCAATGGGGTGCAGGCGAAAGCGCTGGTTC
CTAAATACTGTGTGCAGCGCCCACATACCTGCGACTTGTATCGCAACCAG
AGTGTAATTCAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000292:23255..25069+ >ATCC10864_011618-T1 ID=ATCC10864_011618-T1|Name=ATCC10864_011618-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1815bp|location=Sequence derived from alignment at MCQH01000292:23255..25069+ (Aspergillus niger ATCC 10864)
ATGCTCCTTGCTCGCCTCTGGCCGGCGTGCCTCACGCTGCTCGTGGCCGG
GGCCGCCGCCGTTAAGGTCAATCCTTTACCAGCTCCGCGCAACATTTCTT
GGACTTCTTCGGGTCCTAAGCAGCTGGCAAGCTTTGTCAGTCTCCGTGCA
TCGCAAGATACCCCCGACTTCATTCTCGCCAATGGATGGAATCGCGCATG
GGATTCTATTGTCTCCTTACAATGGGTACCCGCAGCGACCGAAGGCCCCA
TGTCATCCTATCAACCTTTTCCCACCGCGACGGCCGCGGCCGGGGTCACT
AAACGGTCCTCGCAGGCACTGCCATCGCTGCAGTTTGTTGATGTGAATGT
GGCTGATCTTGACGCGGATTTGCAGCATGGAGTTGACGAGTCTTACACAC
TGGAGGTCACCGAGAGCGCTACTTCAGTCGTCATCGAGGCACCCACTGTC
TGGGGAGCACTCCATGCCTTTACTACTCTCCAGCAGCTGGTCATCTCTGA
CGGACAGGGCGGCTTGATAATTGAGCAGTCAGTTAAGATCCAGGATGCGC
CGCTCTATCCTTACCGGGGTATCATGCTTGATACTGGTCGAAATTTTATC
TCAGTTAGCAAGATCTATGAGCAGCTGGACGGCATGTCGCTTTCTAAGCT
CAATGTTCTACACTGGCACATGGAAGACACCCAATCGTGGCCAGTGCAGA
TTGATGCCTATCCAGAGATGATCCATGATGCCTACTCCCCGCGCGAGGTA
TATTCACACGCCGACATGCGCAACATCGTAGCGTATGCCCGAGCACGCGG
CGTACGGGTCATTCCTGAGATTGATATGCCCAGCCATTCCGCTTCGGGTT
GGAAACAGGTTGACCCCCAGATGGTCACCTGCGTGGATTCCTGGTGGTCT
AATGATGATTATGCCTTGCATACCGCGGTAGAACCCCCACCCGGTCAAAT
GGACATCATTTACAACGGCACATATGATGTGGTCCGAGAGGTATATAATG
AGCTGTCCAGCATCTTCCCGGACAACTGGTTCCATGTTGGAGCGGATGAG
ATTCAGCCGAACTGCTTTAACTTCAGCAGCTACGTCACCCAGTGGTTCGC
AGAGGATCCGTCGCGCACTTACAATGATCTGGCCCAGTACTGGGTAGACC
ACGCTGTACCGATCTTCCAGAACTACAGTTCCTCGCGCCAGCTGGTTATG
TGGGAAGATATCGTGCTATCTACGGAACATGCGCATGATGTACCCACAAA
CATCGTGATGCAAACCTGGAACAACGGGCTGGATTACATCAATCAGCTGA
CTGCCAAAGGCTACGATGTGATTGTGTCATCATCGGACTTCATGTATCTG
GACTGTGGGATGGGTGGCTTCCTAACCAATGATCCCCGATACGATGTAAT
GAGCAATCCAGATCCAAACACTCCCAACTTCAACTATGGCGGCAACGGAG
GCTCGTGGTGTGCGCCGTACAAGACGTGGCAGCGTATCTACGACTATGAC
TTCACGCAAAATCTGACTGACGCCCAGGCCCAGCACATCGTGGGCGCGGA
GGCACCCCTCTGGTCGGAACAAGTAGATGATGTGACTGTCTCCAGTCTGT
TCTGGCCGCGCGCCGCTGCTCTGGCAGAGCTGGTATGGTCTGGGAATCGG
GATGAGAATGGACATAAGCGCACGACGCTGATGACGCAGCGTATTTTGAA
CTTTCGCGAGTACTTGGTGGCCAATGGGGTGCAGGCGAAAGCGCTGGTTC
CTAAATACTGTGTGCAGCGCCCACATACCTGCGACTTGTATCGCAACCAG
AGTGTAATTCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004563 | beta-N-acetylhexosaminidase activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR015883 |
| InterPro | IPR029019 |
| InterPro | IPR029018 |
| InterPro | IPR025705 |
| InterPro | IPR017853 |
| PFAM | PF00728 |
| PFAM | PF14845 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH20 |
| Note | SECRETED:SignalP(1-20) |
| Product | woronin body major protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000292 | supercontig | MCQH01000292:23255..25069 + |
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