|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000292:38499..39334- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011624-T1 ID=ATCC10864_011624-T1|Name=ATCC10864_011624-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=836bp|location=Sequence derived from alignment at MCQH01000292:38499..39334- (Aspergillus niger ATCC 10864)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACCGGCGGTGGTG
GTTCCGACACAGCAGGTACTTTCCCTCCTACCCCATCACGCCTTCATCCA
CTAACAAACAATCAGGCTGGGGTGACTACGTCGCCCAATACCTAAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGATTTGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATATGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCGTACCTCGAGAACGCCGCCAATACATTCCAGAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAGTACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAG back to topCoding sequence (CDS) from alignment at MCQH01000292:38499..39334- >ATCC10864_011624-T1 ID=ATCC10864_011624-T1|Name=ATCC10864_011624-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1572bp|location=Sequence derived from alignment at MCQH01000292:38499..39334- (Aspergillus niger ATCC 10864)
GCTGGGGTGACTACGTCGCCCAATACCTAAGCAACTCAAGCGGCATCACC
GTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACGGTCCTACACGCGCGA
AGGCCGATTTGACGACATCGCCAGCACCCTTGAAGCGGGCGACTACGTGA
TCATCGAGTTCGGTCACAACGACGGCGGCACGCTCAGCTCGACCAGCGAC
AACGGCCGCACCGACTGTTCCGGCACGGGCTCCGAAGTATGCTACTCGGA
ATATGACGGCGTCAATGAAACCATCCTCACCTTCCCTGCGTACCTCGAGA
ACGCCGCCAATACATTCCAGAAAATCGGCGCGACCGTCATCATCTCTTCG
CAGACGCCCGATAACCCCTGGGAAACAGGCACTTTCGTGGATGACCCGCC
GCGGTTCGTCGAGTACGCGGAGATCGCGGCGGACACGGCGGATACGTCGT
ACGTGAATCATTTTGCCTATGTGGATCAGGTGTATGAGGCGTTGGGAGCG
GATACCGTGGATGCATTTTATCCGATTGATCATACGCATACGAGTCCGGC
GGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGGGTGTGGTCTGTGGAA
AGTTGAGCTTGGCGGATGAGCTTGTGACGGATGATTTGGAGTTGGATGAG
TATGAATGTTTGGATGAGTAGATGAAGGTCTCCAGCCTCCCCATCTTAGC
CTTCCTCCCTACCTCCCTCGCCACAACCATCTACCTGGCGGGGGACTCCA
CCATGGCCACCGGCGGTGGTGGTTCCGACACAGCAGGCTGGGGTGACTAC
GTCGCCCAATACCTAAGCAACTCAAGCGGCATCACCGTGTCCAACCAAGC
CGTAGCCGGGCGCAGCGCACGGTCCTACACGCGCGAAGGCCGATTTGACG
ACATCGCCAGCACCCTTGAAGCGGGCGACTACGTGATCATCGAGTTCGGT
CACAACGACGGCGGCACGCTCAGCTCGACCAGCGACAACGGCCGCACCGA
CTGTTCCGGCACGGGCTCCGAAGTATGCTACTCGGAATATGACGGCGTCA
ATGAAACCATCCTCACCTTCCCTGCGTACCTCGAGAACGCCGCCAATACA
TTCCAGAAAATCGGCGCGACCGTCATCATCTCTTCGCAGACGCCCGATAA
CCCCTGGGAAACAGGCACTTTCGTGGATGACCCGCCGCGGTTCGTCGAGT
ACGCGGAGATCGCGGCGGACACGGCGGATACGTCGTACGTGAATCATTTT
GCCTATGTGGATCAGGTGTATGAGGCGTTGGGAGCGGATACCGTGGATGC
ATTTTATCCGATTGATCATACGCATACGAGTCCGGCGGGGGCGGATGTTG
TTGCTAAGGCGTTTCTGAGGGGTGTGGTCTGTGGAAAGTTGAGCTTGGCG
GATGAGCTTGTGACGGATGATTTGGAGTTGGATGAGTATGAATGTTTGGA
TGAGTAGATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCT
CCCTCGCCACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACCGGC
GGTGGTGGTTCCGACACAGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:CE12 |
| Product | Rhamnogalacturonan acetylesterase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000292 | supercontig | MCQH01000292:38499..39334 - |
|
