You are here

Home

ATCC10864_011640-T1, ATCC10864_011640-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011640-T1
Unique NameATCC10864_011640-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000304:32445..34016+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011640-T1 ID=ATCC10864_011640-T1|Name=ATCC10864_011640-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1572bp|location=Sequence derived from alignment at MCQH01000304:32445..34016+ (Aspergillus niger ATCC 10864)
ATGCAATCCATAGAGAAGCAAGAAGTTCGACAAGATGATCTACAGGTATC
AATAACAGATAACTGGACAACCGGTAAACGGCTATACCATGCGATAACTC
CCTGCCTATTTGCGTTCCTGATGTAAGTCTGGTCTCATTGACCCAACTTC
CGAAACACTGAGACGATACTAGTACTTTGGGAACTTCTGTCCCCGAGCCT
GCTATTGCTATCATAATGAAGGAGTTCTGCGTTGGCCAACTTGAGGCTAC
ATTGGGCATCACTCTTTATACTATTGGCCTTGCGCTTGGCCCCCTTCTTT
TCGCACCTCTCTCAGAAACATACGGTCGCAGATGGATCTATATATTTGCT
TCAACTTCCCTATTGAGTTTTGCAGCCGGGGCTGGAGCAGCCCAGAGCTT
TGCTAGCTATCTCACCTGTCGATTCCTAAGCGGGATGCTAGGTTCTGTGG
GTATTGCCATGGGTGCAGGAACAGTGGCTGACGTCTGGCCTCAGGGGCGG
GGGCGTGCGTCTGCATTGCTCATGTTCGTCCTGGGTCCATTTTTAGCCCC
CAGCTTGGCGCCTTTCATAGTTGCCTACTTTCTAGAAGCCTTCGATAATG
ATTGGAGATGGACGCAGTGGTTCTTGCTGCTCGTTGGATTTCCCGTCTGG
ATATTGATCCTGGGAATGCGGGAGACCTCGACAGCGAAGCGTTCGAGAGA
CGTGCCGCCAAGGCCTCTACAACGCTCGGTGTCTCTCCCTCTGAGAATGC
TCTGCTCCGACCCCATAATCTTCGCTTTGACTTTACACACTTCCTTTGGC
TATGCAATGATTTTCAGCTTCTTCTCTAGCTTCTCGTACATATTAACTCT
TGACTACGGACTCCACAACCCACAGTCAAGCCTATGTCTTCTGAGTCTAG
CTATAGGTTATTTTTGCGCTATATTGCTGTTTTTGATGCTGGAAGCAGTG
ATACGTATGCGCCTGAAGAGTAGCCAACAACGTCTTTCACAACCGGAGGA
TCGACTAATTCCAGGCATTGCTGGAGGCGTTCTCCTTCTCGCGGGTGAAA
CATGGTATGGTCCTTTGCATCTTTGCATGTGTTGCACTGACGACTACTAC
CTCAGGTATGCGCTCTCCGCCCGCAGGGGTGGAAGCTGGGCAGTATTCGT
TGCTGCAGGTATACCCGTCGGCGGTGGCGCCTTTATTCTTTTCGTGAGAA
GTCATTGTCTGAGAGCAATAGATGGGAGTGACTAACGCACTGTAGCTTTC
CGCCATCAACTACATGATGCAAGTCTACGATCATCGGGTTGTTGCATCTG
GTAAGTAAGAAAGTCATCTGATGCAGAGTACTGGAGCTTACTTTCCATCA
GCCATTGCAGCAAATGGAGCGATTAGATACAGCCTTGGCGCAATATGCCC
TCTTTTCACGATACAGATGTATGAGCGGCTGGGAGCACACTGGGCAGGTG
GCACCTTTGCGCTGATCTCTCTGCTGCTGCTTCCTCTTCCGTGGCTGTTG
ATGCAAAATGGTCAGCGGTTAAGATCGCGATTACCGAAGCGTGACATGGC
AACTAGTGATGTGGAGACTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000304:32445..34016+

>ATCC10864_011640-T1 ID=ATCC10864_011640-T1|Name=ATCC10864_011640-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6840bp|location=Sequence derived from alignment at MCQH01000304:32445..34016+ (Aspergillus niger ATCC 10864)
ATGCAATCCATAGAGAAGCAAGAAGTTCGACAAGATGATCTACAGGTATC
AATAACAGATAACTGGACAACCGGTAAACGGCTATACCATGCGATAACTC
CCTGCCTATTTGCGTTCCTGATTACTTTGGGAACTTCTGTCCCCGAGCCT
GCTATTGCTATCATAATGAAGGAGTTCTGCGTTGGCCAACTTGAGGCTAC
ATTGGGCATCACTCTTTATACTATTGGCCTTGCGCTTGGCCCCCTTCTTT
TCGCACCTCTCTCAGAAACATACGGTCGCAGATGGATCTATATATTTGCT
TCAACTTCCCTATTGAGTTTTGCAGCCGGGGCTGGAGCAGCCCAGAGCTT
TGCTAGCTATCTCACCTGTCGATTCCTAAGCGGGATGCTAGGTTCTGTGG
GTATTGCCATGGGTGCAGGAACAGTGGCTGACGTCTGGCCTCAGGGGCGG
GGGCGTGCGTCTGCATTGCTCATGTTCGTCCTGGGTCCATTTTTAGCCCC
CAGCTTGGCGCCTTTCATAGTTGCCTACTTTCTAGAAGCCTTCGATAATG
ATTGGAGATGGACGCAGTGGTTCTTGCTGCTCGTTGGATTTCCCGTCTGG
ATATTGATCCTGGGAATGCGGGAGACCTCGACAGCGAAGCGTTCGAGAGA
CGTGCCGCCAAGGCCTCTACAACGCTCGGTGTCTCTCCCTCTGAGAATGC
TCTGCTCCGACCCCATAATCTTCGCTTTGACTTTACACACTTCCTTTGGC
TATGCAATGATTTTCAGCTTCTTCTCTAGCTTCTCGTACATATTAACTCT
TGACTACGGACTCCACAACCCACAGTCAAGCCTATGTCTTCTGAGTCTAG
CTATAGGTTATTTTTGCGCTATATTGCTGTTTTTGATGCTGGAAGCAGTG
ATACGTATGCGCCTGAAGAGTAGCCAACAACGTCTTTCACAACCGGAGGA
TCGACTAATTCCAGGCATTGCTGGAGGCGTTCTCCTTCTCGCGGGTGAAA
CATGGTATGCGCTCTCCGCCCGCAGGGGTGGAAGCTGGGCAGTATTCGTT
GCTGCAGGTATACCCGTCGGCGGTGGCGCCTTTATTCTTTTCCTTTCCGC
CATCAACTACATGATGCAAGTCTACGATCATCGGGTTGTTGCATCTGCCA
TTGCAGCAAATGGAGCGATTAGATACAGCCTTGGCGCAATATGCCCTCTT
TTCACGATACAGATGTATGAGCGGCTGGGAGCACACTGGGCAGGTGGCAC
CTTTGCGCTGATCTCTCTGCTGCTGCTTCCTCTTCCGTGGCTGTTGATGC
AAAATGGTCAGCGGTTAAGATCGCGATTACCGAAGCGTGACATGGCAACT
AGTGATGTGGAGACTTAGATGCAATCCATAGAGAAGCAAGAAGTTCGACA
AGATGATCTACAGGTATCAATAACAGATAACTGGACAACCGGTAAACGGC
TATACCATGCGATAACTCCCTGCCTATTTGCGTTCCTGATTACTTTGGGA
ACTTCTGTCCCCGAGCCTGCTATTGCTATCATAATGAAGGAGTTCTGCGT
TGGCCAACTTGAGGCTACATTGGGCATCACTCTTTATACTATTGGCCTTG
CGCTTGGCCCCCTTCTTTTCGCACCTCTCTCAGAAACATACGGTCGCAGA
TGGATCTATATATTTGCTTCAACTTCCCTATTGAGTTTTGCAGCCGGGGC
TGGAGCAGCCCAGAGCTTTGCTAGCTATCTCACCTGTCGATTCCTAAGCG
GGATGCTAGGTTCTGTGGGTATTGCCATGGGTGCAGGAACAGTGGCTGAC
GTCTGGCCTCAGGGGCGGGGGCGTGCGTCTGCATTGCTCATGTTCGTCCT
GGGTCCATTTTTAGCCCCCAGCTTGGCGCCTTTCATAGTTGCCTACTTTC
TAGAAGCCTTCGATAATGATTGGAGATGGACGCAGTGGTTCTTGCTGCTC
GTTGGATTTCCCGTCTGGATATTGATCCTGGGAATGCGGGAGACCTCGAC
AGCGAAGCGTTCGAGAGACGTGCCGCCAAGGCCTCTACAACGCTCGGTGT
CTCTCCCTCTGAGAATGCTCTGCTCCGACCCCATAATCTTCGCTTTGACT
TTACACACTTCCTTTGGCTATGCAATGATTTTCAGCTTCTTCTCTAGCTT
CTCGTACATATTAACTCTTGACTACGGACTCCACAACCCACAGTCAAGCC
TATGTCTTCTGAGTCTAGCTATAGGTTATTTTTGCGCTATATTGCTGTTT
TTGATGCTGGAAGCAGTGATACGTATGCGCCTGAAGAGTAGCCAACAACG
TCTTTCACAACCGGAGGATCGACTAATTCCAGGCATTGCTGGAGGCGTTC
TCCTTCTCGCGGGTGAAACATGGTATGCGCTCTCCGCCCGCAGGGGTGGA
AGCTGGGCAGTATTCGTTGCTGCAGGTATACCCGTCGGCGGTGGCGCCTT
TATTCTTTTCCTTTCCGCCATCAACTACATGATGCAAGTCTACGATCATC
GGGTTGTTGCATCTGCCATTGCAGCAAATGGAGCGATTAGATACAGCCTT
GGCGCAATATGCCCTCTTTTCACGATACAGATGTATGAGCGGCTGGGAGC
ACACTGGGCAGGTGGCACCTTTGCGCTGATCTCTCTGCTGCTGCTTCCTC
TTCCGTGGCTGTTGATGCAAAATGGTCAGCGGTTAAGATCGCGATTACCG
AAGCGTGACATGGCAACTAGTGATGTGGAGACTTAGATGCAATCCATAGA
GAAGCAAGAAGTTCGACAAGATGATCTACAGGTATCAATAACAGATAACT
GGACAACCGGTAAACGGCTATACCATGCGATAACTCCCTGCCTATTTGCG
TTCCTGATTACTTTGGGAACTTCTGTCCCCGAGCCTGCTATTGCTATCAT
AATGAAGGAGTTCTGCGTTGGCCAACTTGAGGCTACATTGGGCATCACTC
TTTATACTATTGGCCTTGCGCTTGGCCCCCTTCTTTTCGCACCTCTCTCA
GAAACATACGGTCGCAGATGGATCTATATATTTGCTTCAACTTCCCTATT
GAGTTTTGCAGCCGGGGCTGGAGCAGCCCAGAGCTTTGCTAGCTATCTCA
CCTGTCGATTCCTAAGCGGGATGCTAGGTTCTGTGGGTATTGCCATGGGT
GCAGGAACAGTGGCTGACGTCTGGCCTCAGGGGCGGGGGCGTGCGTCTGC
ATTGCTCATGTTCGTCCTGGGTCCATTTTTAGCCCCCAGCTTGGCGCCTT
TCATAGTTGCCTACTTTCTAGAAGCCTTCGATAATGATTGGAGATGGACG
CAGTGGTTCTTGCTGCTCGTTGGATTTCCCGTCTGGATATTGATCCTGGG
AATGCGGGAGACCTCGACAGCGAAGCGTTCGAGAGACGTGCCGCCAAGGC
CTCTACAACGCTCGGTGTCTCTCCCTCTGAGAATGCTCTGCTCCGACCCC
ATAATCTTCGCTTTGACTTTACACACTTCCTTTGGCTATGCAATGATTTT
CAGCTTCTTCTCTAGCTTCTCGTACATATTAACTCTTGACTACGGACTCC
ACAACCCACAGTCAAGCCTATGTCTTCTGAGTCTAGCTATAGGTTATTTT
TGCGCTATATTGCTGTTTTTGATGCTGGAAGCAGTGATACGTATGCGCCT
GAAGAGTAGCCAACAACGTCTTTCACAACCGGAGGATCGACTAATTCCAG
GCATTGCTGGAGGCGTTCTCCTTCTCGCGGGTGAAACATGGTATGCGCTC
TCCGCCCGCAGGGGTGGAAGCTGGGCAGTATTCGTTGCTGCAGGTATACC
CGTCGGCGGTGGCGCCTTTATTCTTTTCCTTTCCGCCATCAACTACATGA
TGCAAGTCTACGATCATCGGGTTGTTGCATCTGCCATTGCAGCAAATGGA
GCGATTAGATACAGCCTTGGCGCAATATGCCCTCTTTTCACGATACAGAT
GTATGAGCGGCTGGGAGCACACTGGGCAGGTGGCACCTTTGCGCTGATCT
CTCTGCTGCTGCTTCCTCTTCCGTGGCTGTTGATGCAAAATGGTCAGCGG
TTAAGATCGCGATTACCGAAGCGTGACATGGCAACTAGTGATGTGGAGAC
TTAGATGCAATCCATAGAGAAGCAAGAAGTTCGACAAGATGATCTACAGG
TATCAATAACAGATAACTGGACAACCGGTAAACGGCTATACCATGCGATA
ACTCCCTGCCTATTTGCGTTCCTGATTACTTTGGGAACTTCTGTCCCCGA
GCCTGCTATTGCTATCATAATGAAGGAGTTCTGCGTTGGCCAACTTGAGG
CTACATTGGGCATCACTCTTTATACTATTGGCCTTGCGCTTGGCCCCCTT
CTTTTCGCACCTCTCTCAGAAACATACGGTCGCAGATGGATCTATATATT
TGCTTCAACTTCCCTATTGAGTTTTGCAGCCGGGGCTGGAGCAGCCCAGA
GCTTTGCTAGCTATCTCACCTGTCGATTCCTAAGCGGGATGCTAGGTTCT
GTGGGTATTGCCATGGGTGCAGGAACAGTGGCTGACGTCTGGCCTCAGGG
GCGGGGGCGTGCGTCTGCATTGCTCATGTTCGTCCTGGGTCCATTTTTAG
CCCCCAGCTTGGCGCCTTTCATAGTTGCCTACTTTCTAGAAGCCTTCGAT
AATGATTGGAGATGGACGCAGTGGTTCTTGCTGCTCGTTGGATTTCCCGT
CTGGATATTGATCCTGGGAATGCGGGAGACCTCGACAGCGAAGCGTTCGA
GAGACGTGCCGCCAAGGCCTCTACAACGCTCGGTGTCTCTCCCTCTGAGA
ATGCTCTGCTCCGACCCCATAATCTTCGCTTTGACTTTACACACTTCCTT
TGGCTATGCAATGATTTTCAGCTTCTTCTCTAGCTTCTCGTACATATTAA
CTCTTGACTACGGACTCCACAACCCACAGTCAAGCCTATGTCTTCTGAGT
CTAGCTATAGGTTATTTTTGCGCTATATTGCTGTTTTTGATGCTGGAAGC
AGTGATACGTATGCGCCTGAAGAGTAGCCAACAACGTCTTTCACAACCGG
AGGATCGACTAATTCCAGGCATTGCTGGAGGCGTTCTCCTTCTCGCGGGT
GAAACATGGTATGCGCTCTCCGCCCGCAGGGGTGGAAGCTGGGCAGTATT
CGTTGCTGCAGGTATACCCGTCGGCGGTGGCGCCTTTATTCTTTTCCTTT
CCGCCATCAACTACATGATGCAAGTCTACGATCATCGGGTTGTTGCATCT
GCCATTGCAGCAAATGGAGCGATTAGATACAGCCTTGGCGCAATATGCCC
TCTTTTCACGATACAGATGTATGAGCGGCTGGGAGCACACTGGGCAGGTG
GCACCTTTGCGCTGATCTCTCTGCTGCTGCTTCCTCTTCCGTGGCTGTTG
ATGCAAAATGGTCAGCGGTTAAGATCGCGATTACCGAAGCGTGACATGGC
AACTAGTGATGTGGAGACTTAGATGCAATCCATAGAGAAGCAAGAAGTTC
GACAAGATGATCTACAGGTATCAATAACAGATAACTGGACAACCGGTAAA
CGGCTATACCATGCGATAACTCCCTGCCTATTTGCGTTCCTGATTACTTT
GGGAACTTCTGTCCCCGAGCCTGCTATTGCTATCATAATGAAGGAGTTCT
GCGTTGGCCAACTTGAGGCTACATTGGGCATCACTCTTTATACTATTGGC
CTTGCGCTTGGCCCCCTTCTTTTCGCACCTCTCTCAGAAACATACGGTCG
CAGATGGATCTATATATTTGCTTCAACTTCCCTATTGAGTTTTGCAGCCG
GGGCTGGAGCAGCCCAGAGCTTTGCTAGCTATCTCACCTGTCGATTCCTA
AGCGGGATGCTAGGTTCTGTGGGTATTGCCATGGGTGCAGGAACAGTGGC
TGACGTCTGGCCTCAGGGGCGGGGGCGTGCGTCTGCATTGCTCATGTTCG
TCCTGGGTCCATTTTTAGCCCCCAGCTTGGCGCCTTTCATAGTTGCCTAC
TTTCTAGAAGCCTTCGATAATGATTGGAGATGGACGCAGTGGTTCTTGCT
GCTCGTTGGATTTCCCGTCTGGATATTGATCCTGGGAATGCGGGAGACCT
CGACAGCGAAGCGTTCGAGAGACGTGCCGCCAAGGCCTCTACAACGCTCG
GTGTCTCTCCCTCTGAGAATGCTCTGCTCCGACCCCATAATCTTCGCTTT
GACTTTACACACTTCCTTTGGCTATGCAATGATTTTCAGCTTCTTCTCTA
GCTTCTCGTACATATTAACTCTTGACTACGGACTCCACAACCCACAGTCA
AGCCTATGTCTTCTGAGTCTAGCTATAGGTTATTTTTGCGCTATATTGCT
GTTTTTGATGCTGGAAGCAGTGATACGTATGCGCCTGAAGAGTAGCCAAC
AACGTCTTTCACAACCGGAGGATCGACTAATTCCAGGCATTGCTGGAGGC
GTTCTCCTTCTCGCGGGTGAAACATGGTATGCGCTCTCCGCCCGCAGGGG
TGGAAGCTGGGCAGTATTCGTTGCTGCAGGTATACCCGTCGGCGGTGGCG
CCTTTATTCTTTTCCTTTCCGCCATCAACTACATGATGCAAGTCTACGAT
CATCGGGTTGTTGCATCTGCCATTGCAGCAAATGGAGCGATTAGATACAG
CCTTGGCGCAATATGCCCTCTTTTCACGATACAGATGTATGAGCGGCTGG
GAGCACACTGGGCAGGTGGCACCTTTGCGCTGATCTCTCTGCTGCTGCTT
CCTCTTCCGTGGCTGTTGATGCAAAATGGTCAGCGGTTAAGATCGCGATT
ACCGAAGCGTGACATGGCAACTAGTGATGTGGAGACTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011640ATCC10864_011640Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011640-T1ATCC10864_011640-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011640-T1.exon1ATCC10864_011640-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011640-T1.exon2ATCC10864_011640-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011640-T1.exon3ATCC10864_011640-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011640-T1.exon4ATCC10864_011640-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011640-T1.exon5ATCC10864_011640-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011640-T1.cdsATCC10864_011640-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000304supercontigMCQH01000304:32445..34016 +
Powered by Drupal