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ATCC10864_011648-T1, ATCC10864_011648-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011648-T1
Unique NameATCC10864_011648-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:30207..30984-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011648-T1 ID=ATCC10864_011648-T1|Name=ATCC10864_011648-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=778bp|location=Sequence derived from alignment at MCQH01000306:30207..30984- (Aspergillus niger ATCC 10864)
ATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAGTAAGGATGATT
TGTGTGTGGCCCAGATTTCCTCAGCTGCTGACAGTTCCGCAGCTCAGGTC
ACTCTGGGCGGTTCGGACATGAGTTTCTAGGTAGGTTCCCCGCGATGGTC
TACAGCTCGAGCTTCCCTATTAACAGAGCTTAAGAGTTCGACTTCCGTAC
CCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACT
ACCGCAATGATTCCCTGATCCGGAAAGAAAGTGAGTGCTAGGAAAGGGCC
GTCCGGTTCTACATCGATTCGCTAATGGGCGATCACTACAGTGTGCGTGA
GCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATC
ATGAAGTGAGTCAATCAGTGGGGTTCAATGGCGGTTGGTGGGGGTAAAAA
GATGCTGATGCGACGCAGGGAGGATGATTCCAAATGGCCTCAGAAGAACA
AGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCC
TTTGAGGTATGTCCATCGCCTCATTGACATAGATACTAACAGACGGGAAC
CTGACATCTGTTGTAGACTGCGAAAATCGGCTCATTGGTGGATGTGACTG
AATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGAC
CTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGTAAACAC
AGCTCCTTTGTCTCTTGCTACTCTATGA
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Coding sequence (CDS) from alignment at MCQH01000306:30207..30984-

>ATCC10864_011648-T1 ID=ATCC10864_011648-T1|Name=ATCC10864_011648-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2916bp|location=Sequence derived from alignment at MCQH01000306:30207..30984- (Aspergillus niger ATCC 10864)
ACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGA
AGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCT
TCTCGCTTATTTCGCTCCATTTCAAGGTAAACACAGCTCCTTTGTCTCTT
GCTACTCTATGAGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATG
GACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAG
TGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAA
AGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCG
CTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCTGATC
CGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGAT
GTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAACTGCGAAAATCGG
CTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCT
TCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCG
CTCCATTTCAAGGTAAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGG
AGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTT
GAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCG
TCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAA
AGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATAT
GCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCA
GGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCG
AACCATTCTACCTCCGCTACTAACTGCGAAAATCGGCTCATTGGTGGATG
TGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTC
CAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGT
AAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGGAGGATGATTCCAAA
TGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGG
GAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGA
AGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGT
ACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAA
CTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCG
GTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATTCTACCTC
CGCTACTAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCG
GACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGC
CCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGTAAACACAGCTCCTT
TGTCTCTTGCTACTCTATGAGGAGGATGATTCCAAATGGCCTCAGAAGAA
CAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCT
CCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCA
TCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGG
CCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGATT
CCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGT
TTCTAGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAACTGCG
AAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCT
ACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGC
TTATTTCGCTCCATTTCAAGGTAAACACAGCTCCTTTGTCTCTTGCTACT
CTATGAGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTC
AGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCG
TGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAG
ATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCG
TGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAA
GAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGAC
CCAAGGCGAACCATTCTACCTCCGCTACTAACTGCGAAAATCGGCTCATT
GGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACT
ATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCAT
TTCAAGGTAAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGGAGGATG
ATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATT
CGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATG
ATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCG
ACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAAC
AACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCAC
TCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCAT
TCTACCTCCGCTACTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Vocabulary: Cellular Component
TermDefinition
GO:0035145exon-exon junction complex
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MAGO2ATCC10864_011648Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011648-T1ATCC10864_011648-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011648-T1.cdsATCC10864_011648-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011648-T1.exon6ATCC10864_011648-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_011648-T1.exon5ATCC10864_011648-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_011648-T1.exon4ATCC10864_011648-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011648-T1.exon3ATCC10864_011648-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011648-T1.exon2ATCC10864_011648-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011648-T1.exon1ATCC10864_011648-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036605
InterProIPR004023
PFAMPF02792
Properties
Property NameValue
ProductProtein mago nashi 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:30207..30984 -
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