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ATCC10864_011668-T1, ATCC10864_011668-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011668-T1
Unique NameATCC10864_011668-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:87992..89116+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011668-T1 ID=ATCC10864_011668-T1|Name=ATCC10864_011668-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1125bp|location=Sequence derived from alignment at MCQH01000306:87992..89116+ (Aspergillus niger ATCC 10864)
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCGTATGTTCAC
ATTTTCCCTCTCTTTTTTATCATTTCCCTTTCCAATCTGCTCTCAGCAGT
AACTAATGGTACCCCTCAGTTGCCAACAACTACCTGGCTACCAGGAGCTA
CATTGTTGGGTAAGGCACACCTTTAGGGATCCTTCCCCCCCTCCCCCCTT
AGCATTGGTGCCTTGTGAAAGATTCTTCCTTGTTTGCATGATGAAAAGAA
ATTGGTCCGTGTTTATGAGGCGGCTTAAGACCCCGCTGCAAGATTAAACA
CAATTGCGAGCAATCGCGTTTCTGATTACTTGGAAAAATTCTTCTTTGCT
TTTTGTTTTCCGTCGTTCATGGATATAATCACTAGCGATGATGGTGGCAT
GAAGCTAACTGGAATATAGCGATGCTCCTTCCCAGGCCGATGTCGTGACC
TTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGC
TCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCC
CCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAG
CTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTT
CGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGG
CTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTT
GCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGGTATGTTCCATCT
TCCATTTTTGGATCTTGTGTATGATTCTAACTCGCTACAGATGATGAGAC
CGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTC
TTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAG
CTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCT
CCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTG
TAAGTAAAGATGAACACCTAGGGCGTCGTGATGATGCTAATGAAACCCCA
ACAGGCTGCCATGCAGAAGCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000306:87992..89116+

>ATCC10864_011668-T1 ID=ATCC10864_011668-T1|Name=ATCC10864_011668-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3390bp|location=Sequence derived from alignment at MCQH01000306:87992..89116+ (Aspergillus niger ATCC 10864)
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGCCAACAA
CTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCCAGGCCG
ATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTAC
CCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCA
CGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCG
AGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGAC
ATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAA
GGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGC
CCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGAT
GATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGAT
CGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTA
TCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTT
GATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCAC
CGATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATCTCGCTT
CCGAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGGAGCTAC
ATTGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTT
CTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCGCTGGTACA
AGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCGGCGATGCC
TCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTGCCCACCAA
CCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCTCCGACG
AGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCT
GAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCT
CGTGACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTGAGACTA
TGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCC
TCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCT
TGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCG
AGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATGCAGAAG
CTGTAAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGC
CAACAACTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCC
AGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAG
AAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGC
TGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACG
GCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGAC
GACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGT
CGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGG
CCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCT
TGGGATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCAT
TGAGATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTT
ACGGTATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTC
TCCCTTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCA
GTCCACCGATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATC
TCGCTTCCGAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGG
AGCTACATTGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAA
GGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCGCT
GGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCGGC
GATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTGCC
CACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCT
CCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGT
CTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAA
GTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTG
AGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGG
GGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGAT
CAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTC
AGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATG
CAGAAGCTGTAAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCAC
CCTTGCCAACAACTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTC
CTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGAC
GCCGAGAAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTT
CGAGGCTGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTG
CCTACGGCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAAC
GACGACGACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCC
CGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGA
AGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTT
AAGCCTTGGGATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCG
TGCCATTGAGATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCG
TCGGTTACGGTATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAG
AAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCA
CGTCCAGTCCACCGATGTTGCTGCCATGCAGAAGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011668ATCC10864_011668Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011668-T1ATCC10864_011668-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011668-T1.exon1ATCC10864_011668-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011668-T1.exon2ATCC10864_011668-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011668-T1.exon3ATCC10864_011668-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011668-T1.exon4ATCC10864_011668-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011668-T1.exon5ATCC10864_011668-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011668-T1.cdsATCC10864_011668-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014717
InterProIPR018940
InterProIPR036219
PFAMPF10587
PFAMPF00736
InterProIPR001326
InterProIPR014038
InterProIPR036282
Properties
Property NameValue
NoteBUSCO:EOG092644ZU
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:87992..89116 +
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