You are here

Home

ATCC10864_011676-T1, ATCC10864_011676-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011676-T1
Unique NameATCC10864_011676-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:122358..123462-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011676-T1 ID=ATCC10864_011676-T1|Name=ATCC10864_011676-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1105bp|location=Sequence derived from alignment at MCQH01000306:122358..123462- (Aspergillus niger ATCC 10864)
ATGCGTGCCTCAAGCTTGCTTCCTGCTCTGTTGGCAGCCATCCCTGCCGT
GTCTGCTAGTGGCACTCTGGGACTCTCCATAGGTGATAAAAATGGTGACT
CCAGCTGCAAATCTACGAGTGATTACGAAGCCGACTTCGATGCCCTCAAA
AGTGTGACGACTCTAGTCCGCACGTACTCGGCCAGTGACTGCAATACGGC
TCAGAATATCGTCCCGGCTGCCAAGGCCAAGGGATTCAAAGTCGTTTTGG
GAGTCTGGTAGGGCAATCTCATCGGTTCAGACATATACGTTGACTCTGTG
AAACTAACTTATTGCGTGTTGCAGGGCGGACTACGATCAGTCTTTCGACC
AGGACTTCAACGCCCTTAAGCAAATTGTCCCTGGAAATGAAGATGTTGTG
TCTGCCATTACCGTGGGCTCTGAGGTCCTCTACCGCGGAAGTCTCTCTGC
GCAGGCACTCCTGAGTAAAATCCAACAAGTGCAGAACCAGTTCCCATCAG
TCACCGTTGGCACCGTTGACAGCTGGAACAAATTCGCGGATGGCACTGCC
GACCCCATCATCCAAGGAGGTGTCACTTACCTGTAAGCCCTCTTTTCCCG
ATCATACTCGTATTGTGGGAGTCTCTGTTAACCATAACGATTTAGGCTGG
CCAATGGATTCGCCTACTGGCAGGATGTAGACATCAACAATGCTCCCAGT
ACCTACTCCTCTGACATGACGCAGGCGGAGGATCATATTAAGCAGGTTGC
CGGAGCTAATGCGGGCAATATTCGCTTTGGAAACGGGGAAACCGGCTGGC
CCACCGGTAAGATACATTGGCAACTTCATCCAGCGCCTTAATAGAGATGC
AGACGAACTGATGAAATTATTCTAGATGGCGGATCCGATTACGGTGCTGC
TAAAGCTGGTACTCAGAATGCCGCGCAGTATTACAAATCAGCTGTTTGTC
CCATGCTGCAGAAGGGAACCGACGTCTTTTACTTCGAGGCCTTCGATGAG
GTATGGAAGCCCAATAGCACGGGAGACAACGGCCAGTCCATGGATGAGAA
ACACTGGGGTCTTTTCACTGCCGACCGCAAGCTCAAGTTCGACGTGACCT
GTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000306:122358..123462-

>ATCC10864_011676-T1 ID=ATCC10864_011676-T1|Name=ATCC10864_011676-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3624bp|location=Sequence derived from alignment at MCQH01000306:122358..123462- (Aspergillus niger ATCC 10864)
ATGGCGGATCCGATTACGGTGCTGCTAAAGCTGGTACTCAGAATGCCGCG
CAGTATTACAAATCAGCTGTTTGTCCCATGCTGCAGAAGGGAACCGACGT
CTTTTACTTCGAGGCCTTCGATGAGGTATGGAAGCCCAATAGCACGGGAG
ACAACGGCCAGTCCATGGATGAGAAACACTGGGGTCTTTTCACTGCCGAC
CGCAAGCTCAAGTTCGACGTGACCTGTTGAGCTGGCCAATGGATTCGCCT
ACTGGCAGGATGTAGACATCAACAATGCTCCCAGTACCTACTCCTCTGAC
ATGACGCAGGCGGAGGATCATATTAAGCAGGTTGCCGGAGCTAATGCGGG
CAATATTCGCTTTGGAAACGGGGAAACCGGCTGGCCCACCGGGCGGACTA
CGATCAGTCTTTCGACCAGGACTTCAACGCCCTTAAGCAAATTGTCCCTG
GAAATGAAGATGTTGTGTCTGCCATTACCGTGGGCTCTGAGGTCCTCTAC
CGCGGAAGTCTCTCTGCGCAGGCACTCCTGAGTAAAATCCAACAAGTGCA
GAACCAGTTCCCATCAGTCACCGTTGGCACCGTTGACAGCTGGAACAAAT
TCGCGGATGGCACTGCCGACCCCATCATCCAAGGAGGTGTCACTTACCTA
TGCGTGCCTCAAGCTTGCTTCCTGCTCTGTTGGCAGCCATCCCTGCCGTG
TCTGCTAGTGGCACTCTGGGACTCTCCATAGGTGATAAAAATGGTGACTC
CAGCTGCAAATCTACGAGTGATTACGAAGCCGACTTCGATGCCCTCAAAA
GTGTGACGACTCTAGTCCGCACGTACTCGGCCAGTGACTGCAATACGGCT
CAGAATATCGTCCCGGCTGCCAAGGCCAAGGGATTCAAAGTCGTTTTGGG
AGTCTGATGGCGGATCCGATTACGGTGCTGCTAAAGCTGGTACTCAGAAT
GCCGCGCAGTATTACAAATCAGCTGTTTGTCCCATGCTGCAGAAGGGAAC
CGACGTCTTTTACTTCGAGGCCTTCGATGAGGTATGGAAGCCCAATAGCA
CGGGAGACAACGGCCAGTCCATGGATGAGAAACACTGGGGTCTTTTCACT
GCCGACCGCAAGCTCAAGTTCGACGTGACCTGTTGAGCTGGCCAATGGAT
TCGCCTACTGGCAGGATGTAGACATCAACAATGCTCCCAGTACCTACTCC
TCTGACATGACGCAGGCGGAGGATCATATTAAGCAGGTTGCCGGAGCTAA
TGCGGGCAATATTCGCTTTGGAAACGGGGAAACCGGCTGGCCCACCGGGC
GGACTACGATCAGTCTTTCGACCAGGACTTCAACGCCCTTAAGCAAATTG
TCCCTGGAAATGAAGATGTTGTGTCTGCCATTACCGTGGGCTCTGAGGTC
CTCTACCGCGGAAGTCTCTCTGCGCAGGCACTCCTGAGTAAAATCCAACA
AGTGCAGAACCAGTTCCCATCAGTCACCGTTGGCACCGTTGACAGCTGGA
ACAAATTCGCGGATGGCACTGCCGACCCCATCATCCAAGGAGGTGTCACT
TACCTATGCGTGCCTCAAGCTTGCTTCCTGCTCTGTTGGCAGCCATCCCT
GCCGTGTCTGCTAGTGGCACTCTGGGACTCTCCATAGGTGATAAAAATGG
TGACTCCAGCTGCAAATCTACGAGTGATTACGAAGCCGACTTCGATGCCC
TCAAAAGTGTGACGACTCTAGTCCGCACGTACTCGGCCAGTGACTGCAAT
ACGGCTCAGAATATCGTCCCGGCTGCCAAGGCCAAGGGATTCAAAGTCGT
TTTGGGAGTCTGATGGCGGATCCGATTACGGTGCTGCTAAAGCTGGTACT
CAGAATGCCGCGCAGTATTACAAATCAGCTGTTTGTCCCATGCTGCAGAA
GGGAACCGACGTCTTTTACTTCGAGGCCTTCGATGAGGTATGGAAGCCCA
ATAGCACGGGAGACAACGGCCAGTCCATGGATGAGAAACACTGGGGTCTT
TTCACTGCCGACCGCAAGCTCAAGTTCGACGTGACCTGTTGAGCTGGCCA
ATGGATTCGCCTACTGGCAGGATGTAGACATCAACAATGCTCCCAGTACC
TACTCCTCTGACATGACGCAGGCGGAGGATCATATTAAGCAGGTTGCCGG
AGCTAATGCGGGCAATATTCGCTTTGGAAACGGGGAAACCGGCTGGCCCA
CCGGGCGGACTACGATCAGTCTTTCGACCAGGACTTCAACGCCCTTAAGC
AAATTGTCCCTGGAAATGAAGATGTTGTGTCTGCCATTACCGTGGGCTCT
GAGGTCCTCTACCGCGGAAGTCTCTCTGCGCAGGCACTCCTGAGTAAAAT
CCAACAAGTGCAGAACCAGTTCCCATCAGTCACCGTTGGCACCGTTGACA
GCTGGAACAAATTCGCGGATGGCACTGCCGACCCCATCATCCAAGGAGGT
GTCACTTACCTATGCGTGCCTCAAGCTTGCTTCCTGCTCTGTTGGCAGCC
ATCCCTGCCGTGTCTGCTAGTGGCACTCTGGGACTCTCCATAGGTGATAA
AAATGGTGACTCCAGCTGCAAATCTACGAGTGATTACGAAGCCGACTTCG
ATGCCCTCAAAAGTGTGACGACTCTAGTCCGCACGTACTCGGCCAGTGAC
TGCAATACGGCTCAGAATATCGTCCCGGCTGCCAAGGCCAAGGGATTCAA
AGTCGTTTTGGGAGTCTGATGGCGGATCCGATTACGGTGCTGCTAAAGCT
GGTACTCAGAATGCCGCGCAGTATTACAAATCAGCTGTTTGTCCCATGCT
GCAGAAGGGAACCGACGTCTTTTACTTCGAGGCCTTCGATGAGGTATGGA
AGCCCAATAGCACGGGAGACAACGGCCAGTCCATGGATGAGAAACACTGG
GGTCTTTTCACTGCCGACCGCAAGCTCAAGTTCGACGTGACCTGTTGAGC
TGGCCAATGGATTCGCCTACTGGCAGGATGTAGACATCAACAATGCTCCC
AGTACCTACTCCTCTGACATGACGCAGGCGGAGGATCATATTAAGCAGGT
TGCCGGAGCTAATGCGGGCAATATTCGCTTTGGAAACGGGGAAACCGGCT
GGCCCACCGGGCGGACTACGATCAGTCTTTCGACCAGGACTTCAACGCCC
TTAAGCAAATTGTCCCTGGAAATGAAGATGTTGTGTCTGCCATTACCGTG
GGCTCTGAGGTCCTCTACCGCGGAAGTCTCTCTGCGCAGGCACTCCTGAG
TAAAATCCAACAAGTGCAGAACCAGTTCCCATCAGTCACCGTTGGCACCG
TTGACAGCTGGAACAAATTCGCGGATGGCACTGCCGACCCCATCATCCAA
GGAGGTGTCACTTACCTATGCGTGCCTCAAGCTTGCTTCCTGCTCTGTTG
GCAGCCATCCCTGCCGTGTCTGCTAGTGGCACTCTGGGACTCTCCATAGG
TGATAAAAATGGTGACTCCAGCTGCAAATCTACGAGTGATTACGAAGCCG
ACTTCGATGCCCTCAAAAGTGTGACGACTCTAGTCCGCACGTACTCGGCC
AGTGACTGCAATACGGCTCAGAATATCGTCCCGGCTGCCAAGGCCAAGGG
ATTCAAAGTCGTTTTGGGAGTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011676ATCC10864_011676Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011676-T1ATCC10864_011676-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011676-T1.cdsATCC10864_011676-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011676-T1.exon4ATCC10864_011676-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011676-T1.exon3ATCC10864_011676-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011676-T1.exon2ATCC10864_011676-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011676-T1.exon1ATCC10864_011676-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR017853
PFAMPF00332
InterProIPR000490
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH17
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:122358..123462 -
Powered by Drupal