You are here

Home

ATCC10864_011693-T1, ATCC10864_011693-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011693-T1
Unique NameATCC10864_011693-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:168179..169364-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011693-T1 ID=ATCC10864_011693-T1|Name=ATCC10864_011693-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1186bp|location=Sequence derived from alignment at MCQH01000306:168179..169364- (Aspergillus niger ATCC 10864)
ATGCCCTCTGCCACACCCGTGATCCCATCCCAACAAACCGCTATCGTCGC
TGAAGGCGCCGGCCAACTGAGCATCTATCACGATGCCCCAGTTCCCGCCC
TCCAGCCCGATGTGGCTCTCGTCAAAACCGCCGCCGTGGCCATCAATCCA
GTCGATGCGAAGATGCTCGACTACAGCCCTGTCCCGGGGGCCATCCACGG
GTATGACTTCGCGGGCACCATCGTCGCCCTGGGGAGTGACACCCCGCCGC
ATCTGAAGGTCGGCGACCGGGTCGCAGGCTTCGTGCATGGCATGAACCCC
CTCCTGCCTGACGTGGGCGCATTCGCCGAATACGTTGCCGCCTCTGCCGA
CCTGGTCCTCAAGCTCCCAGACACGATGAGTTTCGAGGAGGGCGCCTCGC
TGGGGCTAGGGCTGTTCACCGCGGGTCTGGGTCTCTTCCAACATCTCCAG
ATCCCACTTTCTCTCACTCGTGAGCCGAGCCCGGAGGCTAGCTCACCTAC
AAAGGCAGACTTTGTCCTCGTTGCGGGTGGCAGTACTGCCACGGGAACCC
GAGCACTGCAACTGCTGAAACTGTACGCTTAACCTTTGCCTCTGCTGCTC
TGTCCTCCAATAGGGTACTTGTATAAAGCATAATACTAAGCCGTAAAAAT
GGGATAGAGCCGGCCTCCGCCCAGTAGCCACCTGCTCCCCCGCCCACTTC
GACCTGGCCCGCCGCTTCGGCGCCGAAGCCGTCTTCGACTACCACGATCC
TGACTGCGCCGCCGCCATCCGCGCCTACACGAAGAACACCCTCGCCTACG
CGCTCGACTGCCTCGCCCTGGCGGAAACCACCCAGCTCTGCTACGGTGCT
CTTGGCCGCGCGGGCGGGCGCTACGTCACCCTCGAGCCCTTCCGGGAGGC
GATCGCCGCCCAACGCCCGCACACCGTCACCCCGTCCTGGTTGCTGGCGC
TGACGATCTTCGGGCGCAAAGTTGCGTTGGATGGGGAGTATGGGCGAGAG
GCAAATCCGGAGGACCGGGAGTTTGGGGCGCGGTTGACGGAGCAGGTGCA
GGGGCTGTTGGATGAGGGGAAGGTGGATGTGCATCCGGTTAGGGTTATGG
GTGGGGGGTGGCAGGGAGTGTTGGAGGGAGTGGATTTGGTGAGGCGGCAG
ACGGTTTCGGGGCACAAGTTGGTTTACGCAGTTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000306:168179..169364-

>ATCC10864_011693-T1 ID=ATCC10864_011693-T1|Name=ATCC10864_011693-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2202bp|location=Sequence derived from alignment at MCQH01000306:168179..169364- (Aspergillus niger ATCC 10864)
AGCCGGCCTCCGCCCAGTAGCCACCTGCTCCCCCGCCCACTTCGACCTGG
CCCGCCGCTTCGGCGCCGAAGCCGTCTTCGACTACCACGATCCTGACTGC
GCCGCCGCCATCCGCGCCTACACGAAGAACACCCTCGCCTACGCGCTCGA
CTGCCTCGCCCTGGCGGAAACCACCCAGCTCTGCTACGGTGCTCTTGGCC
GCGCGGGCGGGCGCTACGTCACCCTCGAGCCCTTCCGGGAGGCGATCGCC
GCCCAACGCCCGCACACCGTCACCCCGTCCTGGTTGCTGGCGCTGACGAT
CTTCGGGCGCAAAGTTGCGTTGGATGGGGAGTATGGGCGAGAGGCAAATC
CGGAGGACCGGGAGTTTGGGGCGCGGTTGACGGAGCAGGTGCAGGGGCTG
TTGGATGAGGGGAAGGTGGATGTGCATCCGGTTAGGGTTATGGGTGGGGG
GTGGCAGGGAGTGTTGGAGGGAGTGGATTTGGTGAGGCGGCAGACGGTTT
CGGGGCACAAGTTGGTTTACGCAGTTTAAATGCCCTCTGCCACACCCGTG
ATCCCATCCCAACAAACCGCTATCGTCGCTGAAGGCGCCGGCCAACTGAG
CATCTATCACGATGCCCCAGTTCCCGCCCTCCAGCCCGATGTGGCTCTCG
TCAAAACCGCCGCCGTGGCCATCAATCCAGTCGATGCGAAGATGCTCGAC
TACAGCCCTGTCCCGGGGGCCATCCACGGGTATGACTTCGCGGGCACCAT
CGTCGCCCTGGGGAGTGACACCCCGCCGCATCTGAAGGTCGGCGACCGGG
TCGCAGGCTTCGTGCATGGCATGAACCCCCTCCTGCCTGACGTGGGCGCA
TTCGCCGAATACGTTGCCGCCTCTGCCGACCTGGTCCTCAAGCTCCCAGA
CACGATGAGTTTCGAGGAGGGCGCCTCGCTGGGGCTAGGGCTGTTCACCG
CGGGTCTGGGTCTCTTCCAACATCTCCAGATCCCACTTTCTCTCACTCGT
GAGCCGAGCCCGGAGGCTAGCTCACCTACAAAGGCAGACTTTGTCCTCGT
TGCGGGTGGCAGTACTGCCACGGGAACCCGAGCACTGCAACTGCTGAAAC
TAGCCGGCCTCCGCCCAGTAGCCACCTGCTCCCCCGCCCACTTCGACCTG
GCCCGCCGCTTCGGCGCCGAAGCCGTCTTCGACTACCACGATCCTGACTG
CGCCGCCGCCATCCGCGCCTACACGAAGAACACCCTCGCCTACGCGCTCG
ACTGCCTCGCCCTGGCGGAAACCACCCAGCTCTGCTACGGTGCTCTTGGC
CGCGCGGGCGGGCGCTACGTCACCCTCGAGCCCTTCCGGGAGGCGATCGC
CGCCCAACGCCCGCACACCGTCACCCCGTCCTGGTTGCTGGCGCTGACGA
TCTTCGGGCGCAAAGTTGCGTTGGATGGGGAGTATGGGCGAGAGGCAAAT
CCGGAGGACCGGGAGTTTGGGGCGCGGTTGACGGAGCAGGTGCAGGGGCT
GTTGGATGAGGGGAAGGTGGATGTGCATCCGGTTAGGGTTATGGGTGGGG
GGTGGCAGGGAGTGTTGGAGGGAGTGGATTTGGTGAGGCGGCAGACGGTT
TCGGGGCACAAGTTGGTTTACGCAGTTTAAATGCCCTCTGCCACACCCGT
GATCCCATCCCAACAAACCGCTATCGTCGCTGAAGGCGCCGGCCAACTGA
GCATCTATCACGATGCCCCAGTTCCCGCCCTCCAGCCCGATGTGGCTCTC
GTCAAAACCGCCGCCGTGGCCATCAATCCAGTCGATGCGAAGATGCTCGA
CTACAGCCCTGTCCCGGGGGCCATCCACGGGTATGACTTCGCGGGCACCA
TCGTCGCCCTGGGGAGTGACACCCCGCCGCATCTGAAGGTCGGCGACCGG
GTCGCAGGCTTCGTGCATGGCATGAACCCCCTCCTGCCTGACGTGGGCGC
ATTCGCCGAATACGTTGCCGCCTCTGCCGACCTGGTCCTCAAGCTCCCAG
ACACGATGAGTTTCGAGGAGGGCGCCTCGCTGGGGCTAGGGCTGTTCACC
GCGGGTCTGGGTCTCTTCCAACATCTCCAGATCCCACTTTCTCTCACTCG
TGAGCCGAGCCCGGAGGCTAGCTCACCTACAAAGGCAGACTTTGTCCTCG
TTGCGGGTGGCAGTACTGCCACGGGAACCCGAGCACTGCAACTGCTGAAA
CT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011693ATCC10864_011693Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011693-T1ATCC10864_011693-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011693-T1.cdsATCC10864_011693-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011693-T1.exon2ATCC10864_011693-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011693-T1.exon1ATCC10864_011693-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00107
InterProIPR013149
InterProIPR036291
InterProIPR011032
InterProIPR020843
Properties
Property NameValue
NoteSMCOG1028:crotonyl-CoA reductase / alcohol dehydrogenase
NoteantiSMASH:Cluster_1000306.2
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:168179..169364 -
Powered by Drupal