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ATCC10864_011709-T1, ATCC10864_011709-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011709-T1
Unique NameATCC10864_011709-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:216014..216881+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011709-T1 ID=ATCC10864_011709-T1|Name=ATCC10864_011709-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=868bp|location=Sequence derived from alignment at MCQH01000306:216014..216881+ (Aspergillus niger ATCC 10864)
ATGTCTAAGATCACAGTCGGTACGTTGCCTCTTTTCCCCAACAATGGAAA
CAATAGGTGTATGTGTATGAAAGAGAGATGCTAATTAATGAACAGCCGGA
GTGCGCCAGAACATCGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAA
GAGAAACTTCCTCGAGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACG
ACCCCCAGCGTGACAAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTT
CCCCGTCCCAACATGACCATCTGGTATGATACCACCCCCACCGGAATCCT
CCCACGGAATAAAGAGAGACAAGGGAACAGAAGTACTAATAAGAGGATAG
TGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTG
ACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTC
ATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCT
CATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGGTAAGC
ACCACATTCCCCATAATATCCCCCAGTCGTGATGAAATACTAAATACTCG
ATTAGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCA
ACAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTT
CTCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCT
CGTCGCCAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGA
AGGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCC
CCTAAGCGTCTGTACTAA
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Coding sequence (CDS) from alignment at MCQH01000306:216014..216881+

>ATCC10864_011709-T1 ID=ATCC10864_011709-T1|Name=ATCC10864_011709-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2616bp|location=Sequence derived from alignment at MCQH01000306:216014..216881+ (Aspergillus niger ATCC 10864)
ATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAGCAGCTGCT
CAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGACCGTCGAGC
TTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGCGTTTCTCT
GGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACCATCTGTGT
TCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTGACG
CCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTCATC
AAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCTCAT
CAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGTAAAT
TCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAACGAG
GTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCGGTGT
TGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAACACCA
TGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCAGAAC
GTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAGCGTCTGTA
CTAAATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAGCAGC
TGCTCAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGACCGTC
GAGCTTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGCGTTT
CTCTGGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACCATCT
GTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATT
GACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCT
CATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCC
TCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGT
AAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAA
CGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCG
GTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAAC
ACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCA
GAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAGCGTC
TGTACTAAATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAG
CAGCTGCTCAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGAC
CGTCGAGCTTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGC
GTTTCTCTGGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACC
ATCTGTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGG
CATTGACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGA
AGCTCATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGAC
ACCCTCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGC
CGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGG
TCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGC
CTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGC
CAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTT
GGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAG
CGTCTGTACTAAATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACAT
CGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCG
AGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGAC
AAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACAT
GACCATCTGTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACC
ACGGCATTGACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAAC
AAGAAGCTCATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTC
CGACACCCTCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCA
AGGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAAC
AAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCT
CTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCG
TCGCCAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAG
GGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCC
TAAGCGTCTGTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP74ATCC10864_011709Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011709-T1.exon1ATCC10864_011709-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011709-T1.exon2ATCC10864_011709-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011709-T1.exon3ATCC10864_011709-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011709-T1.exon4ATCC10864_011709-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011709-T1.cdsATCC10864_011709-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011709-T1ATCC10864_011709-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002143
InterProIPR016095
InterProIPR023674
InterProIPR028364
InterProIPR023673
PFAMPF00687
Properties
Property NameValue
NoteBUSCO:EOG09264LBC
Product60S ribosomal protein L10a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:216014..216881 +
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