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ATCC10864_011788-T1, ATCC10864_011788-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011788-T1
Unique NameATCC10864_011788-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:458070..459521-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011788-T1 ID=ATCC10864_011788-T1|Name=ATCC10864_011788-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1452bp|location=Sequence derived from alignment at MCQH01000306:458070..459521- (Aspergillus niger ATCC 10864)
ATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCTTGAGCATGA
CTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTGGATATCCCA
AGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGGCAGGCAAAT
GCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGGGATTGACAC
CGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTGAGGTGTTGA
GAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCAGAAATTATC
AATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTCGACAGGCGA
GGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGGGATGTGATT
TCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGACTCCGACAA
AAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAGAACTCTCCA
ACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAAGTGATGAAA
AAGCCATGGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTCCGAAAAGCC
CTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGGCGAACTAGC
CTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACATTGATCTATC
TCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCTGCTCTCCTC
CCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCGACACCGACT
GCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTCCAGACAATT
CTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTCTGGGACGCC
AACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGGCCAGCTCTG
GAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTGAGCCAGGGAA
GCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGGACAGTCCGTC
TCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGGCTTGGAGCCC
TGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACAGTGCGTCTTT
GGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCTGGCTTTTGAG
GATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTACAGTTCGTGGA
TAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACGGTGGAGACGT
ATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACGTGCGGAGGAC
AGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAAGTGATGCTCG
GCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTATGGGGTCTTT
AG
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Coding sequence (CDS) from alignment at MCQH01000306:458070..459521-

>ATCC10864_011788-T1 ID=ATCC10864_011788-T1|Name=ATCC10864_011788-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1452bp|location=Sequence derived from alignment at MCQH01000306:458070..459521- (Aspergillus niger ATCC 10864)
ATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCTTGAGCATGA
CTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTGGATATCCCA
AGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGGCAGGCAAAT
GCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGGGATTGACAC
CGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTGAGGTGTTGA
GAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCAGAAATTATC
AATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTCGACAGGCGA
GGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGGGATGTGATT
TCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGACTCCGACAA
AAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAGAACTCTCCA
ACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAAGTGATGAAA
AAGCCATGGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTCCGAAAAGCC
CTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGGCGAACTAGC
CTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACATTGATCTATC
TCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCTGCTCTCCTC
CCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCGACACCGACT
GCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTCCAGACAATT
CTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTCTGGGACGCC
AACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGGCCAGCTCTG
GAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTGAGCCAGGGAA
GCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGGACAGTCCGTC
TCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGGCTTGGAGCCC
TGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACAGTGCGTCTTT
GGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCTGGCTTTTGAG
GATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTACAGTTCGTGGA
TAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACGGTGGAGACGT
ATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACGTGCGGAGGAC
AGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAAGTGATGCTCG
GCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTATGGGGTCTTT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011788ATCC10864_011788Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011788-T1.cdsATCC10864_011788-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011788-T1.exon1ATCC10864_011788-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011788-T1ATCC10864_011788-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
InterProIPR011659
PFAMPF00400
Properties
Property NameValue
NoteSMCOG1173:WD-40 repeat-containing protein
NoteantiSMASH:Cluster_1000306.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:458070..459521 -
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