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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000306:546890..548162- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011812-T1 ID=ATCC10864_011812-T1|Name=ATCC10864_011812-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1273bp|location=Sequence derived from alignment at MCQH01000306:546890..548162- (Aspergillus niger ATCC 10864)
ATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAA
GGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCG
CCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATT
GTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCA
GAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGG
GCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAG
GTGACGGATGACCCGATCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTC
TGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGCGGCA
GCGCCAACCGTTCCGTTCCTTTGGAGCTTCTGCACTCCTTCAAGCGCATG
CGCCGTTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGA
GACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCC
TTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTC
GAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGA
GGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGAC
CCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGC
AGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGC
CCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCA
AGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTG
AAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCG
TGGCCGTGGTGGAAACCGTGGCCGTGACAACCGCGACTGGAGGGAGCGCC
GCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAG
GAGGAGCGCACTGAGGTTCAGAAGGATGCTCGGTATGTATTGACTTCTGC
TTCCCCCCGATCACCACCTTCCCTACCCCATGTCTCAAAGCAAATGTATA
CTAACAAAACACCCCAGCGGTGTCCCCATTGTTCAGAGCACCGCCGAATC
CGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACGGCGACCACCCGGCCA
AGAAGGTGGACGCCAAGGAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000306:546890..548162- >ATCC10864_011812-T1 ID=ATCC10864_011812-T1|Name=ATCC10864_011812-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2376bp|location=Sequence derived from alignment at MCQH01000306:546890..548162- (Aspergillus niger ATCC 10864)
CGGTGTCCCCATTGTTCAGAGCACCGCCGAATCCGGCCAGAAGCGTGCCG
CCGAAGACGAGGCGAACGGCGACCACCCGGCCAAGAAGGTGGACGCCAAG
GAGTAAATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGC
TGAGAAGGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAG
CCCCCGCCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCC
CGCATTGTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGA
AGAGCAGAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTC
GCGAGGGCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACG
CAGCAGGTGACGGATGACCCGATCGAGATTCGCAAGCAGGTTGAGTTCTA
CTTCTCTGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTG
GCGGCAGCGCCAACCGTTCCGTTCCTTTGGAGCTTCTGCACTCCTTCAAG
CGCATGCGCCGTTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTC
GTCCGAGACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGA
CGCCCCTTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAG
GTGTTCGAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGG
CGACGAGGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCT
ACGGACCCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTC
AAGGGCAGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTT
CCTGGCCCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCA
AGAGCAAGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGC
CGCGTGAAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCG
CGGCCGTGGCCGTGGTGGAAACCGTGGCCGTGACAACCGCGACTGGAGGG
AGCGCCGCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAG
CCCAAGGAGGAGCGCACTGAGGTTCAGAAGGATGCTCGCGGTGTCCCCAT
TGTTCAGAGCACCGCCGAATCCGGCCAGAAGCGTGCCGCCGAAGACGAGG
CGAACGGCGACCACCCGGCCAAGAAGGTGGACGCCAAGGAGTAAATGTCC
GAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAAGGATGT
CCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCGCCAACG
GTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATTGTCGAG
GCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCAGAAGGA
ATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGGGCCGCT
TCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAGGTGACG
GATGACCCGATCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTCTGACTC
CAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGCGGCAGCGCCA
ACCGTTCCGTTCCTTTGGAGCTTCTGCACTCCTTCAAGCGCATGCGCCGT
TTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGAGACGCT
TGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCCTTCCGG
AGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTCGAGGAC
CAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGAGGAGCC
GACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGACCCGTCA
ACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGCAGTGTT
TTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGCCCTGGA
CCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCAAGAAGG
ATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTGAAGCCC
AGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCGTGGCCG
TGGTGGAAACCGTGGCCGTGACAACCGCGACTGGAGGGAGCGCCGCGCGG
CTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAGGAGGAG
CGCACTGAGGTTCAGAAGGATGCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:1990904 | ribonucleoprotein complex |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF05383 |
| InterPro | IPR002344 |
| InterPro | IPR012677 |
| InterPro | IPR036388 |
| PFAM | PF00076 |
| InterPro | IPR000504 |
| InterPro | IPR006630 |
| InterPro | IPR036390 |
| InterPro | IPR035979 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000306 | supercontig | MCQH01000306:546890..548162 - |
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