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ATCC10864_011862-T1, ATCC10864_011862-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011862-T1
Unique NameATCC10864_011862-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000310:91235..92401+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011862-T1 ID=ATCC10864_011862-T1|Name=ATCC10864_011862-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1167bp|location=Sequence derived from alignment at MCQH01000310:91235..92401+ (Aspergillus niger ATCC 10864)
ATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGC
TCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCA
CCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGC
TCCGACATCGTCCTCAAGGACATCACCGTCCCTGCTGGTGAGACCCTTAA
CCTGAAGGACCTCAACGACGGCACCACCGTAAGCGTCCCCTCCCAGCCCT
AGCAGCAGCCCCAATCCTAACAAGCATTCCAGGTCACCTTCGAGGGAACC
ACCACCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCGTATCTCCGG
TAAGGACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCGACGGCAACG
GCGCCAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAGACCAAGCCC
AAGTTCTTCTACGCCCACGACCTCGACGACTCCAAGATCTCCGGTCTTTA
CATCAAGAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGGACAACCTCG
TGATCGAGGACGTCACCATCGACAACAGCGACGGTGACTCCGAGGGCGGT
CACAACACCGACGGTTTCGACATCAGCGAGAGTACCTACATCACCATCAC
CGGCGCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCAACTCTGGTG
AGAACATCTACTTCTCCGGCGGTACCTGCTCCGGCGGTCACGGTCTCTCC
ATCGGCTCCGTCGGTGGCCGCGACGACAACACCGTCAAGAACGTCACTTT
CATCGACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCATCAAGACCG
TCTACGACGCTACTGGTACTGTCGAGGACATCACCTACTCCAACATCCAG
CTCTCCGGTATTTCCGACTACGGTATCGTCATCGAGCAGGACTACGAGAA
TGGTGACCCCACTGGTACTCCCTCCAACGGTGTTACCATCTCCGACGTCA
CCCTCGAGGGCATCACTGGCTCGGTTGACTCCGACGCTGTCGAGATCTAC
ATCCTTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTCTGGCATTGA
CATCACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTCCTTCTGGTG
CTTCTTGCGATCAGTAA
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Coding sequence (CDS) from alignment at MCQH01000310:91235..92401+

>ATCC10864_011862-T1 ID=ATCC10864_011862-T1|Name=ATCC10864_011862-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2226bp|location=Sequence derived from alignment at MCQH01000310:91235..92401+ (Aspergillus niger ATCC 10864)
ATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGC
TCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCA
CCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGC
TCCGACATCGTCCTCAAGGACATCACCGTCCCTGCTGGTGAGACCCTTAA
CCTGAAGGACCTCAACGACGGCACCACCGTCACCTTCGAGGGAACCACCA
CCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCGTATCTCCGGTAAG
GACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCGACGGCAACGGCGC
CAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAGACCAAGCCCAAGT
TCTTCTACGCCCACGACCTCGACGACTCCAAGATCTCCGGTCTTTACATC
AAGAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGGACAACCTCGTGAT
CGAGGACGTCACCATCGACAACAGCGACGGTGACTCCGAGGGCGGTCACA
ACACCGACGGTTTCGACATCAGCGAGAGTACCTACATCACCATCACCGGC
GCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCAACTCTGGTGAGAA
CATCTACTTCTCCGGCGGTACCTGCTCCGGCGGTCACGGTCTCTCCATCG
GCTCCGTCGGTGGCCGCGACGACAACACCGTCAAGAACGTCACTTTCATC
GACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCATCAAGACCGTCTA
CGACGCTACTGGTACTGTCGAGGACATCACCTACTCCAACATCCAGCTCT
CCGGTATTTCCGACTACGGTATCGTCATCGAGCAGGACTACGAGAATGGT
GACCCCACTGGTACTCCCTCCAACGGTGTTACCATCTCCGACGTCACCCT
CGAGGGCATCACTGGCTCGGTTGACTCCGACGCTGTCGAGATCTACATCC
TTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTCTGGCATTGACATC
ACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTCCTTCTGGTGCTTC
TTGCGATCAGTAAATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCC
TGGCCGGTGCCGCTCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTC
ACCAAGCGGTCCACCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAG
CAAGACCTCTTGCTCCGACATCGTCCTCAAGGACATCACCGTCCCTGCTG
GTGAGACCCTTAACCTGAAGGACCTCAACGACGGCACCACCGTCACCTTC
GAGGGAACCACCACCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCG
TATCTCCGGTAAGGACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCG
ACGGCAACGGCGCCAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAG
ACCAAGCCCAAGTTCTTCTACGCCCACGACCTCGACGACTCCAAGATCTC
CGGTCTTTACATCAAGAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGG
ACAACCTCGTGATCGAGGACGTCACCATCGACAACAGCGACGGTGACTCC
GAGGGCGGTCACAACACCGACGGTTTCGACATCAGCGAGAGTACCTACAT
CACCATCACCGGCGCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCA
ACTCTGGTGAGAACATCTACTTCTCCGGCGGTACCTGCTCCGGCGGTCAC
GGTCTCTCCATCGGCTCCGTCGGTGGCCGCGACGACAACACCGTCAAGAA
CGTCACTTTCATCGACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCA
TCAAGACCGTCTACGACGCTACTGGTACTGTCGAGGACATCACCTACTCC
AACATCCAGCTCTCCGGTATTTCCGACTACGGTATCGTCATCGAGCAGGA
CTACGAGAATGGTGACCCCACTGGTACTCCCTCCAACGGTGTTACCATCT
CCGACGTCACCCTCGAGGGCATCACTGGCTCGGTTGACTCCGACGCTGTC
GAGATCTACATCCTTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTC
TGGCATTGACATCACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTC
CTTCTGGTGCTTCTTGCGATCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011862ATCC10864_011862Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011862-T1.exon1ATCC10864_011862-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011862-T1.exon2ATCC10864_011862-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011862-T1.cdsATCC10864_011862-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011862-T1ATCC10864_011862-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR006626
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000310supercontigMCQH01000310:91235..92401 +
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