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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000310:138246..139552- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011875-T1 ID=ATCC10864_011875-T1|Name=ATCC10864_011875-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1307bp|location=Sequence derived from alignment at MCQH01000310:138246..139552- (Aspergillus niger ATCC 10864)
ATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCGC
GAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATCG
TATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCTT
GACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCCT
CGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATCA
GCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGTC
GAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAGC
CGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATCG
ACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGATC
CGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGGC
TTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAGT
TGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCGA
CGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGGG
AGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGTG
CGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTTG
TATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGAA
AATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGC
AGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGTG
CTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAACTTTA
CGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGA
GCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGATG
GTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAAT
ATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGGG
ATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAGC
ATTACCAATGCGTTTCCAGTGAGTACTATCATTTCAGTACAATTGTGGTC
TACAGTGAGCTAACATAAGAGTAGGAATTCGCAGCTGGACAGCCAGCAGT
GCATTGA back to topCoding sequence (CDS) from alignment at MCQH01000310:138246..139552- >ATCC10864_011875-T1 ID=ATCC10864_011875-T1|Name=ATCC10864_011875-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2502bp|location=Sequence derived from alignment at MCQH01000310:138246..139552- (Aspergillus niger ATCC 10864)
GAATTCGCAGCTGGACAGCCAGCAGTGCATTGAATGGCTTCCCAAAAAAT
CACCTCCGCCCTCGCGGAGATCGAATCCTCCGCGAACCCCCAAAACAAGC
TGCAGCTCTACAACAACCTCCTCAGCGACATCGTATCGACGTCCACAGAA
CCCCAGATTTCTAGAGACCTAATTTACTTTCTTGACTCCGTCCTCAGCGA
AGACATCAGCATCGTCGCCGCCCGCCCCATCCTCGACTCCTTCATCGTCG
TCCTCCGCAAACTCACCCAAGAAACCCAAATCAGCGTCGGCCAACACGCC
ATCACCCTCCTCCAATCCCGATCCACCTCTGTCGAAGAACAAGACGCGCA
GATCCGCGAGCTCCTCGCAGATGCCTACGAAGCCGAAGGCCAGTACACCG
ACGCCGCAAAAGCCCTGCAGGGCATCCACATCGACAGTTCGCAGCGTCTG
GTCTCCGACGCAGCCAAGGTGCGGCTATGGATCCGGATTGTGAGATACTA
CCTCGAGGAAGACGATACCACAAGTGCGGAGGCTTTCTTGAACCGCATCA
AGAACCTACCGAGTAAGATCGAGGATCATGAGTTGAAGCTACATTTCAAG
CTATCCCAGGCTCGTATATTGGATGCTCGCCGACGCTTTCTCGATGCTAG
TCAGGAATACTTCAATGTTAGCCTTGCGGCGGGAGTGGATGAAGCGGATC
GATTGCAGGCCTTGGCGGCTGCTATTCGGTGTGCGGTGCTCGCTCCGGCC
GGGCCGCAGCGGTCTCGGATCCTCGCGACGTTGTATAAGGATGATCGGTC
GACGTCGGTGGATGAGTTTGCTATCCTGGAGAAAATGTTCCTGGATCGGT
TGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGCAGCGGTTGGCGCCGCAT
CAGTTGGCTGTGACGGCTGATGGGTCTACGGTGCTTGATAAGGCTGTTGT
TGAACACAATTTGGTTGCGGCCAGCAAACTTTACGAAAATATTACGACTG
ATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGAGCGGGGACTTCACGGCG
GGGGAGAAGGCGGAAGATTATGCGGCGAGGATGGTCGAGCAGGGTCGATT
GAAGGGGAGTATTGATCAGATTGACGGGATAATATACTTCGATGGAGGAA
ATGCGACTACAGGACAGCATATCCGGCAGTGGGATGCTGGGGTGCAGGGT
TTGGCCGAGGACGTGGAGAGAGTGGCTACCAGCATTACCAATGCGTTTCC
AGAATTCGCAGCTGGACAGCCAGCAGTGCATTGAATGGCTTCCCAAAAAA
TCACCTCCGCCCTCGCGGAGATCGAATCCTCCGCGAACCCCCAAAACAAG
CTGCAGCTCTACAACAACCTCCTCAGCGACATCGTATCGACGTCCACAGA
ACCCCAGATTTCTAGAGACCTAATTTACTTTCTTGACTCCGTCCTCAGCG
AAGACATCAGCATCGTCGCCGCCCGCCCCATCCTCGACTCCTTCATCGTC
GTCCTCCGCAAACTCACCCAAGAAACCCAAATCAGCGTCGGCCAACACGC
CATCACCCTCCTCCAATCCCGATCCACCTCTGTCGAAGAACAAGACGCGC
AGATCCGCGAGCTCCTCGCAGATGCCTACGAAGCCGAAGGCCAGTACACC
GACGCCGCAAAAGCCCTGCAGGGCATCCACATCGACAGTTCGCAGCGTCT
GGTCTCCGACGCAGCCAAGGTGCGGCTATGGATCCGGATTGTGAGATACT
ACCTCGAGGAAGACGATACCACAAGTGCGGAGGCTTTCTTGAACCGCATC
AAGAACCTACCGAGTAAGATCGAGGATCATGAGTTGAAGCTACATTTCAA
GCTATCCCAGGCTCGTATATTGGATGCTCGCCGACGCTTTCTCGATGCTA
GTCAGGAATACTTCAATGTTAGCCTTGCGGCGGGAGTGGATGAAGCGGAT
CGATTGCAGGCCTTGGCGGCTGCTATTCGGTGTGCGGTGCTCGCTCCGGC
CGGGCCGCAGCGGTCTCGGATCCTCGCGACGTTGTATAAGGATGATCGGT
CGACGTCGGTGGATGAGTTTGCTATCCTGGAGAAAATGTTCCTGGATCGG
TTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGCAGCGGTTGGCGCCGCA
TCAGTTGGCTGTGACGGCTGATGGGTCTACGGTGCTTGATAAGGCTGTTG
TTGAACACAATTTGGTTGCGGCCAGCAAACTTTACGAAAATATTACGACT
GATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGAGCGGGGACTTCACGGC
GGGGGAGAAGGCGGAAGATTATGCGGCGAGGATGGTCGAGCAGGGTCGAT
TGAAGGGGAGTATTGATCAGATTGACGGGATAATATACTTCGATGGAGGA
AATGCGACTACAGGACAGCATATCCGGCAGTGGGATGCTGGGGTGCAGGG
TTTGGCCGAGGACGTGGAGAGAGTGGCTACCAGCATTACCAATGCGTTTC
CA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0008180 | COP9 signalosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR037754 |
| PFAM | PF01399 |
| InterPro | IPR036388 |
| InterPro | IPR000717 |
| InterPro | IPR019585 |
| PFAM | PF10602 |
| InterPro | IPR036390 |
| InterPro | IPR040134 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000310 | supercontig | MCQH01000310:138246..139552 - |
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