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ATCC10864_011876-T1, ATCC10864_011876-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011876-T1
Unique NameATCC10864_011876-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000310:140349..141695+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011876-T1 ID=ATCC10864_011876-T1|Name=ATCC10864_011876-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1347bp|location=Sequence derived from alignment at MCQH01000310:140349..141695+ (Aspergillus niger ATCC 10864)
ATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACATCAA
ACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTACTCG
CTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGACTTC
TCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCACTATG
GGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAGGAGA
TTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAAACGG
GTAGGTCTCTAAATGCGATGAACTTTGTCGAGGGACCTCGGTTTGTGTTA
CACACGGACTGACACTTGCGACCTTTTGCAGGTCAGTTTGCGCATAAACG
CACGAGAAGACAATCGCGATATTCCTAAAGACTATCTACTGCAACGGCAA
ACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAAATACGTACCTTTT
CACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATGGTGGTTTTTGGCG
AGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGATATGAGGAAGAAG
GAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAACGGTACCGAGTAT
GTACCATCTGTTACTGCGACAAAGGAGATCTTGCTCACATTGTAATAGAA
CAAACCGCTTTGGTGGGGAGCGTGAGTGAAGAGTTCAACTGCCTTCCGGT
TGAGAATGAGGAATTCCGGCGGTTGTCGGAGAAGAAGGCTCTGGAGGCAC
TCAAACCGAAGCGTGAGACTGTATTTATCGATAAGATTCCGGGCAAGATG
CTCCAGCCGCGGAATGCATTGCCCGGAGAGAAGGGTGCTTTTGTGGTAAG
TGTGCCTTTGCCGTGCTCATTAGTCCTACTTTACTTACCAAACACTTTTC
ATTCCAGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAGAACAAAA
CCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGTGCTTC
AGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTGCGACA
GCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTTGGTTA
AAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGCGAGGGAA
AGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGAACTCGCTCC
GGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCCTTCCG
GTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000310:140349..141695+

>ATCC10864_011876-T1 ID=ATCC10864_011876-T1|Name=ATCC10864_011876-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4608bp|location=Sequence derived from alignment at MCQH01000310:140349..141695+ (Aspergillus niger ATCC 10864)
ATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACATCAA
ACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTACTCG
CTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGACTTC
TCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCACTATG
GGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAGGAGA
TTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAAACGG
GTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGA
CTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGA
CGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAAT
CGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAA
GCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCA
GGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGTGAAGAG
TTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGGAGAA
GAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATCGATA
AGATTCCGGGCAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGAGAAG
GGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAGAA
CAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGT
GCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTG
CGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTT
GGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGCGA
GGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGAACTC
GCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCC
TTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCT
AAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACATC
AAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTACT
CGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGACT
TCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCACTA
TGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAGGA
GATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAAAC
GGGTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAA
GACTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTT
GACGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGA
ATCGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATG
AAGCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGT
CAGGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGTGAAG
AGTTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGGAG
AAGAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATCGA
TAAGATTCCGGGCAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGAGA
AGGGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGGAG
AACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCA
GTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGAC
TGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCAT
TTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAGGC
GAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGAAC
TCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACG
CCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGT
CTAAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACA
TCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTA
CTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGA
CTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCAC
TATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAG
GAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAA
ACGGGTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTA
AAGACTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCAC
TTGACGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGA
GAATCGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGA
TGAAGCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTAC
GTCAGGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGTGA
AGAGTTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGG
AGAAGAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATC
GATAAGATTCCGGGCAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGA
GAAGGGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCAGG
AGAACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTAC
CAGTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAG
ACTGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGC
ATTTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAG
GCGAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGA
ACTCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCA
CGCCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTT
GTCTAAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATA
CATCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAG
TACTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTA
GACTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTC
ACTATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACG
AGGAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTC
AAACGGGTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCC
TAAAGACTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGC
ACTTGACGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCAT
GAGAATCGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTC
GATGAAGCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCT
ACGTCAGGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGT
GAAGAGTTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTC
GGAGAAGAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTA
TCGATAAGATTCCGGGCAAGATGCTCCAGCCGCGGAATGCATTGCCCGGA
GAGAAGGGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGCCCAAGGCCCA
GGAGAACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCT
ACCAGTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCG
AGACTGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGC
GCATTTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCG
AGGCGAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGAT
GAACTCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGC
CACGCCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACG
TTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0006366transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0005674transcription factor TFIIF complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011876ATCC10864_011876Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011876-T1.exon1ATCC10864_011876-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011876-T1.exon2ATCC10864_011876-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011876-T1.exon3ATCC10864_011876-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011876-T1.exon4ATCC10864_011876-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011876-T1.cdsATCC10864_011876-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011876-T1ATCC10864_011876-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR040504
InterProIPR011039
InterProIPR036388
PFAMPF17683
InterProIPR003196
InterProIPR040450
InterProIPR036390
PFAMPF02270
Properties
Property NameValue
NoteBUSCO:EOG09262NIR
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000310supercontigMCQH01000310:140349..141695 +
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