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ATCC10864_011882-T1, ATCC10864_011882-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011882-T1
Unique NameATCC10864_011882-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000310:169882..171723+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011882-T1 ID=ATCC10864_011882-T1|Name=ATCC10864_011882-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1842bp|location=Sequence derived from alignment at MCQH01000310:169882..171723+ (Aspergillus niger ATCC 10864)
ATGTCGGAACTGCTGTGCTGCCTGTCGGTCAAGTCTCCCCGATTTTGCGC
GATATCTGCAGTTCTATCGACCATGCCTGCCCCTACGACTGCAGCAGTCA
CCTCCAAGAAGAGGAAAAATGTCAAGTCGAGCGCCGTTCCCTCCTCTAAG
CGCCGCGCAGTCGCTGAGACTGAGAGCCCCAATGCGATTGCCGATATCCA
GCAGCTGGAAGACCAAATTTCCGAGTCGCGAAAATACTACAACAACATTG
CGACCCTGATTTCCATGCTCAATGTCGATGGCTCGTCGAAACCGAACATG
ACTGTTGCCGTTGCCCTTTGCCGGGTTTTCAGTCGTCTGATCGCTGGTGG
GAATTTGACGGAGACTAGTCGCGCTGCAGAGAATGAGAAAATCATTGTAG
CTTGGTTGAAAGAACGCTGCCGGGAATACCAGAAGCTCTTGCTGTCCATC
ATTCGCGAATCTGACTCCTCATCTCAGGTCCGTATATATTCCAACTGGCC
ATATCCACACGGTACTAACACCCAGCAGATCAGCGCCTTGACCTTGTGCC
TGTGCCTCATCAACGAACGTGCCACCCACCTCCCCGGCGACAATACTCAG
GAATGGACATCGGGCTTATTCAAGGGAATTTTCGAGGCGGTTGTTGAAGC
CAAGAACGGACAAGCAGTGCTCTCCGAATTCATCGAGAAGACAAAGGAAT
TCGAAGACGTGCGGTACTACACATTCATGCAGCTTGCGTATGTCCACCTG
CACAGAACCAAAAAGGAGCCTTTACAGCAGTCCAAATCCACTGACACACA
AAACAGCGAATACGCAGACACCGAACAAACATCCGAGACCCTCGACGTCC
TAATCTCCATACTCTCAGCATGCGATTCCGTACCAGGCCCGGAGCACGAA
TTCGAAAGCTTCTACACCGAATCCAGCAAGCAGAACAAAAAGGTCCTCTC
CGTGAACTCGCACAAGAAACGAGCCCAAGACGCCTGGCTCGCCATCCTGC
GCAACAACCTCTCCCAATCGCAGCGTAAAACCCTCCTGCGCATCATGGTC
CACAACATCGAGCCGTGGTTCAACCGCCCCGAACTCCTCATGGACTTCTT
AACAGATTCCTACAACGTCGGAGGAGCAACCTCTCTCCTTGCCCTCTCGG
GTCTCTTCTACCTCATCCAAGAGAAGAACCTCGACTACCCCCAATTCTAC
CAAAAGCTCTACTCGCTCCTCGACGCCGACCTCCTCCACTCCAAGCACCG
CTCCCGCTTCTTCCGCCTCATGAACACCTTCCTCGCCTCTACCCACTTGC
CCGCCGCCCTGATCGCTAGCTTCCTCAAGCGTCTCTCTCGCCTCTCTCTC
AACGCGCCCCCGACTGCCATCGTGGCCATTGTCCCCTTCATGTACAACCT
CCTCAAAGAACACCCTACCTGCGCCTTCATGATGCACCGCAACATTCGCG
ACGAAGGGCTCAAGGCTCAGATAGAAGCAGAGGGCATGGATGATCCCTTT
GATCCTACTGAGCCCGATCCGACCCGCACAAACGCCATCGAGAGCAGTTT
ATGGGAAATCGAGACTCTTCAGTCTCATTATCATCCTAATGTGGCTGCTA
TTGCAAACATTATTTCTGAGCAGTTCACGAAACAATTCTATAATTTGGAG
GATTTCTTGGATTACACTTACCAGGGTATGTTGCAGGGAGAGCTGGGGAC
TGAGGACAAGCCGTTCAAGAGGACGCCGGTGGTGGAGTATCAAATACCCA
GGCGGATCTTCACGGATCGGTTGTTGGAGGAAGATGGTGGCCAGGATTCG
GGTCCTGGTAGCTTTGTCCGAGGATTGTGGGATTTTGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000310:169882..171723+

>ATCC10864_011882-T1 ID=ATCC10864_011882-T1|Name=ATCC10864_011882-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1842bp|location=Sequence derived from alignment at MCQH01000310:169882..171723+ (Aspergillus niger ATCC 10864)
ATGTCGGAACTGCTGTGCTGCCTGTCGGTCAAGTCTCCCCGATTTTGCGC
GATATCTGCAGTTCTATCGACCATGCCTGCCCCTACGACTGCAGCAGTCA
CCTCCAAGAAGAGGAAAAATGTCAAGTCGAGCGCCGTTCCCTCCTCTAAG
CGCCGCGCAGTCGCTGAGACTGAGAGCCCCAATGCGATTGCCGATATCCA
GCAGCTGGAAGACCAAATTTCCGAGTCGCGAAAATACTACAACAACATTG
CGACCCTGATTTCCATGCTCAATGTCGATGGCTCGTCGAAACCGAACATG
ACTGTTGCCGTTGCCCTTTGCCGGGTTTTCAGTCGTCTGATCGCTGGTGG
GAATTTGACGGAGACTAGTCGCGCTGCAGAGAATGAGAAAATCATTGTAG
CTTGGTTGAAAGAACGCTGCCGGGAATACCAGAAGCTCTTGCTGTCCATC
ATTCGCGAATCTGACTCCTCATCTCAGGTCCGTATATATTCCAACTGGCC
ATATCCACACGGTACTAACACCCAGCAGATCAGCGCCTTGACCTTGTGCC
TGTGCCTCATCAACGAACGTGCCACCCACCTCCCCGGCGACAATACTCAG
GAATGGACATCGGGCTTATTCAAGGGAATTTTCGAGGCGGTTGTTGAAGC
CAAGAACGGACAAGCAGTGCTCTCCGAATTCATCGAGAAGACAAAGGAAT
TCGAAGACGTGCGGTACTACACATTCATGCAGCTTGCGTATGTCCACCTG
CACAGAACCAAAAAGGAGCCTTTACAGCAGTCCAAATCCACTGACACACA
AAACAGCGAATACGCAGACACCGAACAAACATCCGAGACCCTCGACGTCC
TAATCTCCATACTCTCAGCATGCGATTCCGTACCAGGCCCGGAGCACGAA
TTCGAAAGCTTCTACACCGAATCCAGCAAGCAGAACAAAAAGGTCCTCTC
CGTGAACTCGCACAAGAAACGAGCCCAAGACGCCTGGCTCGCCATCCTGC
GCAACAACCTCTCCCAATCGCAGCGTAAAACCCTCCTGCGCATCATGGTC
CACAACATCGAGCCGTGGTTCAACCGCCCCGAACTCCTCATGGACTTCTT
AACAGATTCCTACAACGTCGGAGGAGCAACCTCTCTCCTTGCCCTCTCGG
GTCTCTTCTACCTCATCCAAGAGAAGAACCTCGACTACCCCCAATTCTAC
CAAAAGCTCTACTCGCTCCTCGACGCCGACCTCCTCCACTCCAAGCACCG
CTCCCGCTTCTTCCGCCTCATGAACACCTTCCTCGCCTCTACCCACTTGC
CCGCCGCCCTGATCGCTAGCTTCCTCAAGCGTCTCTCTCGCCTCTCTCTC
AACGCGCCCCCGACTGCCATCGTGGCCATTGTCCCCTTCATGTACAACCT
CCTCAAAGAACACCCTACCTGCGCCTTCATGATGCACCGCAACATTCGCG
ACGAAGGGCTCAAGGCTCAGATAGAAGCAGAGGGCATGGATGATCCCTTT
GATCCTACTGAGCCCGATCCGACCCGCACAAACGCCATCGAGAGCAGTTT
ATGGGAAATCGAGACTCTTCAGTCTCATTATCATCCTAATGTGGCTGCTA
TTGCAAACATTATTTCTGAGCAGTTCACGAAACAATTCTATAATTTGGAG
GATTTCTTGGATTACACTTACCAGGGTATGTTGCAGGGAGAGCTGGGGAC
TGAGGACAAGCCGTTCAAGAGGACGCCGGTGGTGGAGTATCAAATACCCA
GGCGGATCTTCACGGATCGGTTGTTGGAGGAAGATGGTGGCCAGGATTCG
GGTCCTGGTAGCTTTGTCCGAGGATTGTGGGATTTTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011882ATCC10864_011882Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011882-T1.exon1ATCC10864_011882-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011882-T1.cdsATCC10864_011882-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011882-T1ATCC10864_011882-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03914
InterProIPR005612
InterProIPR027193
Properties
Property NameValue
NoteBUSCO:EOG09261RWU
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000310supercontigMCQH01000310:169882..171723 +
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