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ATCC10864_011890-T1, ATCC10864_011890-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011890-T1
Unique NameATCC10864_011890-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000310:190071..190887+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011890-T1 ID=ATCC10864_011890-T1|Name=ATCC10864_011890-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=817bp|location=Sequence derived from alignment at MCQH01000310:190071..190887+ (Aspergillus niger ATCC 10864)
ATGGCGTCCGCAGAAGTCCAGAAAGTGCCCGTTTACTCGGTCAATGGTTA
GTTCGCGCGATAAACATCACTATTACTACATACATCCAAGATATTACTGC
GACGCAACACTTGCTACACTCATAGATCTATGTATTGGTCAACAAAACTC
ACTAATTACTTCATTGAACAGACATAAAATCAACAACCGATGACGCCCTA
GCTCCCTACCTTGGCTCCCTCCCCCAACCCTACACATTCGCCCAAGACCA
CACCAAGACCAATGTCCACCTATTCTTGGGCTATGCTGCCGTCGCAATTG
CCGGCTTCAGCTTCTATGCTGAACGCAAACTCAACTGGGAGGCGACACAT
TCGCCATGGATCATCGCAGCCGTTTTGTCGTACTTTACCTTGAACTCGCT
CCTCACGTACTGGGTTTGGGCTGTCGAGGCGGGTGAGGTATTCCATGGGA
AGCGAAAGTCGGGTGAAACGGTACGCTTTTTCTATCGCCGAAAGGCGGGT
TAATTTGGTTGCGTGCTAATATGATATGCTAGATTATCATTCGGTCGTCC
GTGCAGAAGCACTCCCCGTTGTACAAGCTGCAGGTCCAGTATAAGTCGGC
GCAGGGCAAGATGCTGCAGGAGAAGGAGATTGAGACCTCGTTCACTAAGT
GGTTTGCTGCGGATGGGACATTTCATCCCGAGCCGTTGAGGGCCTGGCTG
GCTGGTGAGATCGAGGTTCTGGGGTTGGCAGCCAAGGAAACGCAGAAGAA
GACCGGCGGTGTTGCCAGTTTAGTGGGTGTTGAGGAGGAAAGCAAGGATG
TCAAGAGGAGGAAGTGA
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Coding sequence (CDS) from alignment at MCQH01000310:190071..190887+

>ATCC10864_011890-T1 ID=ATCC10864_011890-T1|Name=ATCC10864_011890-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1890bp|location=Sequence derived from alignment at MCQH01000310:190071..190887+ (Aspergillus niger ATCC 10864)
ATGGCGTCCGCAGAAGTCCAGAAAGTGCCCGTTTACTCGGTCAATGACAT
AAAATCAACAACCGATGACGCCCTAGCTCCCTACCTTGGCTCCCTCCCCC
AACCCTACACATTCGCCCAAGACCACACCAAGACCAATGTCCACCTATTC
TTGGGCTATGCTGCCGTCGCAATTGCCGGCTTCAGCTTCTATGCTGAACG
CAAACTCAACTGGGAGGCGACACATTCGCCATGGATCATCGCAGCCGTTT
TGTCGTACTTTACCTTGAACTCGCTCCTCACGTACTGGGTTTGGGCTGTC
GAGGCGGGTGAGGTATTCCATGGGAAGCGAAAGTCGGGTGAAACGATTAT
CATTCGGTCGTCCGTGCAGAAGCACTCCCCGTTGTACAAGCTGCAGGTCC
AGTATAAGTCGGCGCAGGGCAAGATGCTGCAGGAGAAGGAGATTGAGACC
TCGTTCACTAAGTGGTTTGCTGCGGATGGGACATTTCATCCCGAGCCGTT
GAGGGCCTGGCTGGCTGGTGAGATCGAGGTTCTGGGGTTGGCAGCCAAGG
AAACGCAGAAGAAGACCGGCGGTGTTGCCAGTTTAGTGGGTGTTGAGGAG
GAAAGCAAGGATGTCAAGAGGAGGAAGTGAATGGCGTCCGCAGAAGTCCA
GAAAGTGCCCGTTTACTCGGTCAATGACATAAAATCAACAACCGATGACG
CCCTAGCTCCCTACCTTGGCTCCCTCCCCCAACCCTACACATTCGCCCAA
GACCACACCAAGACCAATGTCCACCTATTCTTGGGCTATGCTGCCGTCGC
AATTGCCGGCTTCAGCTTCTATGCTGAACGCAAACTCAACTGGGAGGCGA
CACATTCGCCATGGATCATCGCAGCCGTTTTGTCGTACTTTACCTTGAAC
TCGCTCCTCACGTACTGGGTTTGGGCTGTCGAGGCGGGTGAGGTATTCCA
TGGGAAGCGAAAGTCGGGTGAAACGATTATCATTCGGTCGTCCGTGCAGA
AGCACTCCCCGTTGTACAAGCTGCAGGTCCAGTATAAGTCGGCGCAGGGC
AAGATGCTGCAGGAGAAGGAGATTGAGACCTCGTTCACTAAGTGGTTTGC
TGCGGATGGGACATTTCATCCCGAGCCGTTGAGGGCCTGGCTGGCTGGTG
AGATCGAGGTTCTGGGGTTGGCAGCCAAGGAAACGCAGAAGAAGACCGGC
GGTGTTGCCAGTTTAGTGGGTGTTGAGGAGGAAAGCAAGGATGTCAAGAG
GAGGAAGTGAATGGCGTCCGCAGAAGTCCAGAAAGTGCCCGTTTACTCGG
TCAATGACATAAAATCAACAACCGATGACGCCCTAGCTCCCTACCTTGGC
TCCCTCCCCCAACCCTACACATTCGCCCAAGACCACACCAAGACCAATGT
CCACCTATTCTTGGGCTATGCTGCCGTCGCAATTGCCGGCTTCAGCTTCT
ATGCTGAACGCAAACTCAACTGGGAGGCGACACATTCGCCATGGATCATC
GCAGCCGTTTTGTCGTACTTTACCTTGAACTCGCTCCTCACGTACTGGGT
TTGGGCTGTCGAGGCGGGTGAGGTATTCCATGGGAAGCGAAAGTCGGGTG
AAACGATTATCATTCGGTCGTCCGTGCAGAAGCACTCCCCGTTGTACAAG
CTGCAGGTCCAGTATAAGTCGGCGCAGGGCAAGATGCTGCAGGAGAAGGA
GATTGAGACCTCGTTCACTAAGTGGTTTGCTGCGGATGGGACATTTCATC
CCGAGCCGTTGAGGGCCTGGCTGGCTGGTGAGATCGAGGTTCTGGGGTTG
GCAGCCAAGGAAACGCAGAAGAAGACCGGCGGTGTTGCCAGTTTAGTGGG
TGTTGAGGAGGAAAGCAAGGATGTCAAGAGGAGGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005787signal peptidase complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011890ATCC10864_011890Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011890-T1.exon1ATCC10864_011890-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011890-T1.exon2ATCC10864_011890-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011890-T1.exon3ATCC10864_011890-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011890-T1.cdsATCC10864_011890-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011890-T1ATCC10864_011890-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009582
PFAMPF06703
Properties
Property NameValue
NoteBUSCO:EOG09265B95
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000310supercontigMCQH01000310:190071..190887 +
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