You are here

Home

M747DRAFT_102065-T1, M747DRAFT_102065-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_102065-T1
Unique NameM747DRAFT_102065-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:283926..285130+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_102065-T1 ID=M747DRAFT_102065-T1|Name=M747DRAFT_102065-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1205bp|location=Sequence derived from alignment at KZ851931.1:283926..285130+ (Aspergillus niger ATCC 13496)
ATGATCAAAGGTTACTCAAAGCTTCTCCAGCCTACCCATCACCTGCGCCT
ATCCCGCTCGATAGATACGATTTCCAGTCGTTGTCCGGGTTAGGAATCTC
AAATTGTGGAACAGGATCCCCCTCAAGCCAGATCAGACTCTACCCGTGTC
CGGAGCAATATGCACTTTCAACGAGCAACTGGTCCGACCCAATAACGCAT
TCCCCAAACATCCTCGAAACCCCTCCAGACGCCAGTCGGTTCCCGCCCAG
TACGCATTACGAGCCATTCGGTAGCCATGCAGATATCTCAGTATCACCCA
GTTACAGCCCAGTTATGGATTTTGGTGCGATGCATGATGAAATTCCTCGC
TTCTGGCCTAACACTCCTACCTCCGAAACCATGGCAGCGTCAGAAGGCTG
GTCCAATGTGGACGTCTGGGAATCATCTTTCCTGGATGATTCAAACAATA
CAATGGTCTCCAGAATGCCAGAGATCCCTCGACTCCAACTCAACACCGCG
TATCTGCATCCCCAACGACCGGATAATACCCTCACTGAGCTGGACCCGAG
TCAAAGTGTCGCGCCGGATTTGGTCCCTGATGAGGCAATCTCCAAGTGGA
TCGAAAATGTTAGCGAATCGCCCCATGGAGAACAATCCAAGATACCGTCA
GCAAGTGGCTTAGAGTGTCCCACGTGTGGTGTCCGCTTCACACGACGCTC
TAACTGTAAAGAGCATATGAAGAGCCATGACCCTAACTACGTAAGGCCAC
ATCCATGCGAGACCTGCGGGCGGGAGTTTAGGCGGAGAACTGATCTGAAG
AGACACGTAGATAGTGTAAGTGATTTTGGATAGAGTAAAGTTCATGGCTA
ATAGAACGCACAGATCCATCGGGGAATACGCAAGTATGGCTGTGAGAAGT
GTGGTCGGCGCTACAGTCGACAGGACACATTGTCAAGGTACCGTATTCGG
ATCAAGCTCCAATGTGAAACAACGAACTCACTCTGCTACAGACATCAGTC
GGACGGCTGCGATGGAAGAACCCGGAAGACACGAGCTTCTCGAAACGACA
CAGATGCGCCATACCCCACTGATGACTATTACGCTTCACCACACTAATCA
ACTGAGAGCCCTTTGATGTTTTAGTTGCCTGCTCTAGACCATGCATGCGT
TGACCGCAGCTAGTCATGAACGTTACGGCTGCATACTTTGGGAGAGGATC
CATTG
back to top

Coding sequence (CDS) from alignment at KZ851931.1:283926..285130+

>M747DRAFT_102065-T1 ID=M747DRAFT_102065-T1|Name=M747DRAFT_102065-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2043bp|location=Sequence derived from alignment at KZ851931.1:283926..285130+ (Aspergillus niger ATCC 13496)
ATGGATTTTGGTGCGATGCATGATGAAATTCCTCGCTTCTGGCCTAACAC
TCCTACCTCCGAAACCATGGCAGCGTCAGAAGGCTGGTCCAATGTGGACG
TCTGGGAATCATCTTTCCTGGATGATTCAAACAATACAATGGTCTCCAGA
ATGCCAGAGATCCCTCGACTCCAACTCAACACCGCGTATCTGCATCCCCA
ACGACCGGATAATACCCTCACTGAGCTGGACCCGAGTCAAAGTGTCGCGC
CGGATTTGGTCCCTGATGAGGCAATCTCCAAGTGGATCGAAAATGTTAGC
GAATCGCCCCATGGAGAACAATCCAAGATACCGTCAGCAAGTGGCTTAGA
GTGTCCCACGTGTGGTGTCCGCTTCACACGACGCTCTAACTGTAAAGAGC
ATATGAAGAGCCATGACCCTAACTACGTAAGGCCACATCCATGCGAGACC
TGCGGGCGGGAGTTTAGGCGGAGAACTGATCTGAAGAGACACGTAGATAG
TATCCATCGGGGAATACGCAAGTATGGCTGTGAGAAGTGTGGTCGGCGCT
ACAGTCGACAGGACACATTGTCAAGACATCAGTCGGACGGCTGCGATGGA
AGAACCCGGAAGACACGAGCTTCTCGAAACGACACAGATGCGCCATACCC
CACTGATGACTATTACGCTTCACCACACTAAATGGATTTTGGTGCGATGC
ATGATGAAATTCCTCGCTTCTGGCCTAACACTCCTACCTCCGAAACCATG
GCAGCGTCAGAAGGCTGGTCCAATGTGGACGTCTGGGAATCATCTTTCCT
GGATGATTCAAACAATACAATGGTCTCCAGAATGCCAGAGATCCCTCGAC
TCCAACTCAACACCGCGTATCTGCATCCCCAACGACCGGATAATACCCTC
ACTGAGCTGGACCCGAGTCAAAGTGTCGCGCCGGATTTGGTCCCTGATGA
GGCAATCTCCAAGTGGATCGAAAATGTTAGCGAATCGCCCCATGGAGAAC
AATCCAAGATACCGTCAGCAAGTGGCTTAGAGTGTCCCACGTGTGGTGTC
CGCTTCACACGACGCTCTAACTGTAAAGAGCATATGAAGAGCCATGACCC
TAACTACGTAAGGCCACATCCATGCGAGACCTGCGGGCGGGAGTTTAGGC
GGAGAACTGATCTGAAGAGACACGTAGATAGTATCCATCGGGGAATACGC
AAGTATGGCTGTGAGAAGTGTGGTCGGCGCTACAGTCGACAGGACACATT
GTCAAGACATCAGTCGGACGGCTGCGATGGAAGAACCCGGAAGACACGAG
CTTCTCGAAACGACACAGATGCGCCATACCCCACTGATGACTATTACGCT
TCACCACACTAAATGGATTTTGGTGCGATGCATGATGAAATTCCTCGCTT
CTGGCCTAACACTCCTACCTCCGAAACCATGGCAGCGTCAGAAGGCTGGT
CCAATGTGGACGTCTGGGAATCATCTTTCCTGGATGATTCAAACAATACA
ATGGTCTCCAGAATGCCAGAGATCCCTCGACTCCAACTCAACACCGCGTA
TCTGCATCCCCAACGACCGGATAATACCCTCACTGAGCTGGACCCGAGTC
AAAGTGTCGCGCCGGATTTGGTCCCTGATGAGGCAATCTCCAAGTGGATC
GAAAATGTTAGCGAATCGCCCCATGGAGAACAATCCAAGATACCGTCAGC
AAGTGGCTTAGAGTGTCCCACGTGTGGTGTCCGCTTCACACGACGCTCTA
ACTGTAAAGAGCATATGAAGAGCCATGACCCTAACTACGTAAGGCCACAT
CCATGCGAGACCTGCGGGCGGGAGTTTAGGCGGAGAACTGATCTGAAGAG
ACACGTAGATAGTATCCATCGGGGAATACGCAAGTATGGCTGTGAGAAGT
GTGGTCGGCGCTACAGTCGACAGGACACATTGTCAAGACATCAGTCGGAC
GGCTGCGATGGAAGAACCCGGAAGACACGAGCTTCTCGAAACGACACAGA
TGCGCCATACCCCACTGATGACTATTACGCTTCACCACACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_102065M747DRAFT_102065Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_102065-T1M747DRAFT_102065-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_102065-T1.utr5p1M747DRAFT_102065-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_102065-T1.exon1M747DRAFT_102065-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_102065-T1.exon2M747DRAFT_102065-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_102065-T1.exon3M747DRAFT_102065-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_102065-T1.cdsM747DRAFT_102065-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_102065-T1.utr3p1M747DRAFT_102065-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:283926..285130 +
Powered by Drupal