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M747DRAFT_10233-T1, M747DRAFT_10233-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_10233-T1
Unique NameM747DRAFT_10233-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:87219..88183-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_10233-T1 ID=M747DRAFT_10233-T1|Name=M747DRAFT_10233-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=965bp|location=Sequence derived from alignment at KZ851908.1:87219..88183- (Aspergillus niger ATCC 13496)
CTAATCTCTTTGCTCTCTGGCAACACCATTAACCTCATACCACTGTTACT
CCAGCGTAGTAGATGATTCAACAGGGTTATGGCGGACACACAAGAACAGG
CCAGAGCTGCGTCTGTTTGTCTGACCTGCAAATTGGGTAAAAGGCAATGT
GATAAGAGACTTCCTATTTGTTCTCGATGCAACAAGTACGTTGTGCTACC
AACCATCATGTAACACCGGGGATCAATATCCTACCCCCCAATGAATACTC
ACTAATTATCGCGTATCGAACAGACTTGGTAGGCCATGTGAATATCCACC
CAGTCCGCCAGTGGTGACCGCGGCTCAACCGACGGAGTCGGGGCCATCAA
TGAGTAGGATGTCGCCCATGGCATGTATACGATGTAGGGCAAACAAACGT
AGATGTGATCGCGCCATTCCGGAGTGCTCCCGGTGCCGGAGGTACGAGAA
ATGCTTGCCACCACGCGGATGCTTGCTTAATTGTTACCATTAGAGTCGTC
GCCAGTTGTGTCTACCCACCGTCTCGGCCGAAGTCCCCCGCCTTTGCGGA
CACCGATGACTTTGGGCCAGACATGGAGTCCGCTTCACTACTTGTGCCGA
CAGAGATGGAGGCTGCGATGGACACCCCCATTGGATATCGGTCATACATG
TCACCACTTCTAGAATTCTGTTAGTCTCCTATCTACAGGGTGTTGCTCTG
GCGGTATTTGCTCACTGCTCTCTCACCCCGGGGAAGTCCTCACCTCAATA
GCTTTACCCTCAGACACCATAGGGACTAACAGCCTTTCTCACCACCTCCG
TTCGGAATGGATGAAGCATGCTATGATGGACCCCTGTTTGTTCCACGCCA
CCCTGTTTAGCGCATCAGCATCGATTGATATGCTGCGCTGTCAGCAAAAC
ACTGCGGTAACCCTGTATCACCAGACCTGGGCTATACGCTTGCTTAACGA
GCGATTGGCACAGCC
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Coding sequence (CDS) from alignment at KZ851908.1:87219..88183-

>M747DRAFT_10233-T1 ID=M747DRAFT_10233-T1|Name=M747DRAFT_10233-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1368bp|location=Sequence derived from alignment at KZ851908.1:87219..88183- (Aspergillus niger ATCC 13496)
AGTCGTCGCCAGTTGTGTCTACCCACCGTCTCGGCCGAAGTCCCCCGCCT
TTGCGGACACCGATGACTTTGGGCCAGACATGGAGTCCGCTTCACTACTT
GTGCCGACAGAGATGGAGGCTGCGATGGACACCCCCATTGGATATCGGTC
ATACATGTCACCACTTCTAGAATTCTGTTAGACTTGGTAGGCCATGTGAA
TATCCACCCAGTCCGCCAGTGGTGACCGCGGCTCAACCGACGGAGTCGGG
GCCATCAATGAGTAGGATGTCGCCCATGGCATGTATACGATGTAGGGCAA
ACAAACGTAGATGTGATCGCGCCATTCCGGAGTGCTCCCGGTGCCGGAGA
TGGCGGACACACAAGAACAGGCCAGAGCTGCGTCTGTTTGTCTGACCTGC
AAATTGGGTAAAAGGCAATGTGATAAGAGACTTCCTATTTGTTCTCGATG
CAACAAAGTCGTCGCCAGTTGTGTCTACCCACCGTCTCGGCCGAAGTCCC
CCGCCTTTGCGGACACCGATGACTTTGGGCCAGACATGGAGTCCGCTTCA
CTACTTGTGCCGACAGAGATGGAGGCTGCGATGGACACCCCCATTGGATA
TCGGTCATACATGTCACCACTTCTAGAATTCTGTTAGACTTGGTAGGCCA
TGTGAATATCCACCCAGTCCGCCAGTGGTGACCGCGGCTCAACCGACGGA
GTCGGGGCCATCAATGAGTAGGATGTCGCCCATGGCATGTATACGATGTA
GGGCAAACAAACGTAGATGTGATCGCGCCATTCCGGAGTGCTCCCGGTGC
CGGAGATGGCGGACACACAAGAACAGGCCAGAGCTGCGTCTGTTTGTCTG
ACCTGCAAATTGGGTAAAAGGCAATGTGATAAGAGACTTCCTATTTGTTC
TCGATGCAACAAAGTCGTCGCCAGTTGTGTCTACCCACCGTCTCGGCCGA
AGTCCCCCGCCTTTGCGGACACCGATGACTTTGGGCCAGACATGGAGTCC
GCTTCACTACTTGTGCCGACAGAGATGGAGGCTGCGATGGACACCCCCAT
TGGATATCGGTCATACATGTCACCACTTCTAGAATTCTGTTAGACTTGGT
AGGCCATGTGAATATCCACCCAGTCCGCCAGTGGTGACCGCGGCTCAACC
GACGGAGTCGGGGCCATCAATGAGTAGGATGTCGCCCATGGCATGTATAC
GATGTAGGGCAAACAAACGTAGATGTGATCGCGCCATTCCGGAGTGCTCC
CGGTGCCGGAGATGGCGGACACACAAGAACAGGCCAGAGCTGCGTCTGTT
TGTCTGACCTGCAAATTGGGTAAAAGGCAATGTGATAAGAGACTTCCTAT
TTGTTCTCGATGCAACAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_10233M747DRAFT_10233Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_10233-T1M747DRAFT_10233-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_10233-T1.cdsM747DRAFT_10233-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_10233-T1.utr3p1M747DRAFT_10233-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_10233-T1.exon3M747DRAFT_10233-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_10233-T1.exon2M747DRAFT_10233-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_10233-T1.exon1M747DRAFT_10233-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_10233-T1.utr5p1M747DRAFT_10233-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519081.2
NoteantiSMASH:Cluster_8519081.1
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:87219..88183 -
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