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M747DRAFT_103649-T1, M747DRAFT_103649-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_103649-T1
Unique NameM747DRAFT_103649-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851932.1:304435..305130+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_103649-T1 ID=M747DRAFT_103649-T1|Name=M747DRAFT_103649-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=696bp|location=Sequence derived from alignment at KZ851932.1:304435..305130+ (Aspergillus niger ATCC 13496)
TCTCTTCTCTGTGTCCCCCGACCCAGACTCTTCGATTGCCTTCCACTGTC
TTGCTGCTGACATATCTCATTCTATTGCTACGAAGCGTCGACTGCTCGTA
ATACCTGCAGCTTTCTTTTAGCTAGCGAACTTCTCACTCTATATCTCGCG
TTGCCCATCGTTCTTCAAGAGTCGTCGCGTCTCCCACCACTTTCAAGAGA
AGCTCCTGATCTCATAAACCCACCATGTCTCGCCATCATCCCGATCTTGT
CATGTGCCGCAAGCAGCCCGGCATCTCTATCGGCCGCTTGTGCGATAAGT
GTGACGGCAAATGTCCCGTGTGCGACTCCTACGTGCGTCCCACGACCCTG
GTCCGCATCTGCGACGAGTGCTCCTTCGGAAACTACCAGAACAAGTGCAT
CGTTTGTGGTGGAGAGGGTATCAGTGATGCCTTTTACTGCTTTGAGTGCA
CGCGACTCGAGAAGGATCGGGACGGCTGTCCGAAGATTATAAACCTGGGA
AGTTCGAGGACAGATTTATTCTACCAAAAGAAAAGTTTTCGAAATCATTG
ATGCTGGCTGGGTGTTGTTTTTCTTGTTCGCCACGCGTTTGGGAACTCTT
GGACGCGAACTTGCTGCTATCTGCATCGTATGCTCCTGGCCTTAGGGAGC
TCTGCAGATTTATGGGAGTGGCTTGGGCGAATATAAACGGTTGTTG
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Coding sequence (CDS) from alignment at KZ851932.1:304435..305130+

>M747DRAFT_103649-T1 ID=M747DRAFT_103649-T1|Name=M747DRAFT_103649-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=327bp|location=Sequence derived from alignment at KZ851932.1:304435..305130+ (Aspergillus niger ATCC 13496)
ATGTCTCGCCATCATCCCGATCTTGTCATGTGCCGCAAGCAGCCCGGCAT
CTCTATCGGCCGCTTGTGCGATAAGTGTGACGGCAAATGTCCCGTGTGCG
ACTCCTACGTGCGTCCCACGACCCTGGTCCGCATCTGCGACGAGTGCTCC
TTCGGAAACTACCAGAACAAGTGCATCGTTTGTGGTGGAGAGGGTATCAG
TGATGCCTTTTACTGCTTTGAGTGCACGCGACTCGAGAAGGATCGGGACG
GCTGTCCGAAGATTATAAACCTGGGAAGTTCGAGGACAGATTTATTCTAC
CAAAAGAAAAGTTTTCGAAATCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_103649M747DRAFT_103649Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_103649-T1.utr5p1M747DRAFT_103649-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_103649-T1.exon1M747DRAFT_103649-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_103649-T1.cdsM747DRAFT_103649-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_103649-T1.utr3p1M747DRAFT_103649-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_103649-T1M747DRAFT_103649-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265DWT
DBxrefInterPro:IPR005345
DBxrefPFAM:PF03660
ProductPHF5-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851932.1supercontigKZ851932.1:304435..305130 +
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