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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851902.1:480377..482584- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_115086-T1 ID=M747DRAFT_115086-T1|Name=M747DRAFT_115086-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2208bp|location=Sequence derived from alignment at KZ851902.1:480377..482584- (Aspergillus niger ATCC 13496)
CGATCAATAACGCTGACCCCATGCTGAGTCGATCGGAATGCCACTGCCAG
CATATTCAACGTAGGCTAAGGACTGCAAATGATCAGGGCTGGTGATGGTC
CCCGAACCTCGGGGATCTCGGCATGCAGGCCTGATTCCAGAACTCGGGAA
TCAGCCTCGATGGAGTCCGATCATTCGATGCTACGAATCCTCCATACATT
GTAAATAATATATCCTTCATATGGCCTCCCTTTACCCTGGAGTTGGCTCG
TGCATGCAGAATCATCATCATGGCCGACCAACGACCCTCTCCCCTCGCCT
GTGTACCCTGTCGTCGTCGCCATGTCAAATGCGACGCTCGCATGCCCATC
TGCACCCGTTGTCGCAATAGCAACAGTGACTGTCACTATGTTCGTTCACG
GCGCGGCTTACGGAACAGATCTAGTCCTGATCCACCCCCGGGCGATGTCG
ATCTCCTCCCAGACTTTACCACCTGGCTAAACAACACCATTGACTTAGAT
GTACGCCTTTCTATCCTACTAAACATGAATGCCATGCTAACCAACCCAGC
CAGAGCTACTCGGCCTCGACCCCAGCATCGATGTCAATGGCGATGTTCAC
TCCGATCCCATCCCGGACTTTCCTCCGTCACCACCAGCATACACTCCCAC
AGTCGCGGAGTCTGAGCCCCTTGCCCATGATGCCATGATTCAGCTCTATT
ACCATCACTTTCATCGCTCGCATCCCATCCTCCTGCCCCGGCGCAGTCTT
GCTTCGTCGCTATGCCAGCACATCCCATCGTACATCACGCATATCATGCG
TTACATCGGCAGCCACTACTATCCCCAGCCAGGATTCAGCGATACCTTCC
AAGCGCCCGCCTACACGGCCCTTTCCGCCCCAAACGACGGATTCAAGGTC
CAGGGGTTACTTCTTCTCGCTATCATTGAGCACTCCTACGGACATGAAGA
GACGGCCCGTAAGCTCCTCAAAGATGCGATTCAATTAGCATGCCACCTCG
ACATGATCAACCCCTCTTTCGCACGTAGCCACTCTCGCGGCAGTCCTGTC
CTCGAAGAAAGTTGGCGACGCACCTACTGGGAACTCGTCGTTGTGGAAGG
GCTCGTGTCCGCTTTTGGCGGCGGGCCCATCCTGCCCAGTTACAAATGGA
TCAACGACGAAATGCAGCTTCCCTGCGACGAAAAGGCATATAATTTCGAG
GTACATCCTTAGCGGACAAGCTAACGAATTCATTTGACACTAACATCCTA
ACTAGCAACTCAAACCCCCCAAACCATCCGCCACCCTCTCAACCCTCCTA
GATCTCGACCTCCACCACATCTCCCCCTTCACCTACCGCATCCTCGCAAC
GCAAGAACTCCGCGCCGTCCTCCAAGTCACACAATGCCTCGACCCCGACA
CCGAACTTCAAACCGAAACATTAGACGCCCGTCTCGCCACCTCTTTAATG
AGACTTCCCTCATCCCTACCAGAACACGACACTGCAACCGTCGACGAAAT
GGTCTTTCAAACACTAATGATAACATACCTGTACGCCAAGCCTACCCAAC
TCTCCCCAGCCAAACTCTAACAATGACAAATACCAGAAGCCTAATCTACC
TCCACCACCCACATTCCACTATCCGCCTCGCCTCCTACCACTCCGCCACC
ACCCTCGCTTCCTCCTCCTCAACATCATCCTGCACCCGTCTCCGCACCCT
CCAATCCTTACCCTTATCCGCGCACATCCCCCACCACGACTCTCCCGCCT
CTAACACCCACTCCCACAAACTCCTCCGCGCCGCAGATCTCCTCTCGAAC
CTTGCTACGCTCCCTAGCACGGTCCTCTCCCGAACGCCGTTCTTCACCTG
CGCTCTTGCCATCGCTGCGGTGGTCCATGTAGCCTCCTTGACGGGCGGAC
CTCCGTCTTCTCTGGCGATCAAGTACGAGGGCGAGACGGGAGCTGGGAAG
GAACAGTCACTGAAAGCGAGGATTGAGTTAGGGGTAGGAGCGCTGCAGGT
TCTTGGACGGGCGTGGCCGCTTGCTAGGAGGGTTAGGGGGGAGATGGTCG
ATATGTATCGCGGGAGGTGTTGATACATTCCTACCTTCTACTTGTGTGTT
GGAGATTAAGTGGGATGACTTGGAGCTGAAATTGTATATAATATCATCGA
TAACTATGATGATCAAGTACACGATAGACAAATAGTACATAGATAAATTT
CCTGGGAT back to topCoding sequence (CDS) from alignment at KZ851902.1:480377..482584- >M747DRAFT_115086-T1 ID=M747DRAFT_115086-T1|Name=M747DRAFT_115086-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6576bp|location=Sequence derived from alignment at KZ851902.1:480377..482584- (Aspergillus niger ATCC 13496)
AAGCCTAATCTACCTCCACCACCCACATTCCACTATCCGCCTCGCCTCCT
ACCACTCCGCCACCACCCTCGCTTCCTCCTCCTCAACATCATCCTGCACC
CGTCTCCGCACCCTCCAATCCTTACCCTTATCCGCGCACATCCCCCACCA
CGACTCTCCCGCCTCTAACACCCACTCCCACAAACTCCTCCGCGCCGCAG
ATCTCCTCTCGAACCTTGCTACGCTCCCTAGCACGGTCCTCTCCCGAACG
CCGTTCTTCACCTGCGCTCTTGCCATCGCTGCGGTGGTCCATGTAGCCTC
CTTGACGGGCGGACCTCCGTCTTCTCTGGCGATCAAGTACGAGGGCGAGA
CGGGAGCTGGGAAGGAACAGTCACTGAAAGCGAGGATTGAGTTAGGGGTA
GGAGCGCTGCAGGTTCTTGGACGGGCGTGGCCGCTTGCTAGGAGGGTTAG
GGGGGAGATGGTCGATATGTATCGCGGGAGGTGTTGACAACTCAAACCCC
CCAAACCATCCGCCACCCTCTCAACCCTCCTAGATCTCGACCTCCACCAC
ATCTCCCCCTTCACCTACCGCATCCTCGCAACGCAAGAACTCCGCGCCGT
CCTCCAAGTCACACAATGCCTCGACCCCGACACCGAACTTCAAACCGAAA
CATTAGACGCCCGTCTCGCCACCTCTTTAATGAGACTTCCCTCATCCCTA
CCAGAACACGACACTGCAACCGTCGACGAAATGGTCTTTCAAACACTAAT
GATAACATACCTCCAGAGCTACTCGGCCTCGACCCCAGCATCGATGTCAA
TGGCGATGTTCACTCCGATCCCATCCCGGACTTTCCTCCGTCACCACCAG
CATACACTCCCACAGTCGCGGAGTCTGAGCCCCTTGCCCATGATGCCATG
ATTCAGCTCTATTACCATCACTTTCATCGCTCGCATCCCATCCTCCTGCC
CCGGCGCAGTCTTGCTTCGTCGCTATGCCAGCACATCCCATCGTACATCA
CGCATATCATGCGTTACATCGGCAGCCACTACTATCCCCAGCCAGGATTC
AGCGATACCTTCCAAGCGCCCGCCTACACGGCCCTTTCCGCCCCAAACGA
CGGATTCAAGGTCCAGGGGTTACTTCTTCTCGCTATCATTGAGCACTCCT
ACGGACATGAAGAGACGGCCCGTAAGCTCCTCAAAGATGCGATTCAATTA
GCATGCCACCTCGACATGATCAACCCCTCTTTCGCACGTAGCCACTCTCG
CGGCAGTCCTGTCCTCGAAGAAAGTTGGCGACGCACCTACTGGGAACTCG
TCGTTGTGGAAGGGCTCGTGTCCGCTTTTGGCGGCGGGCCCATCCTGCCC
AGTTACAAATGGATCAACGACGAAATGCAGCTTCCCTGCGACGAAAAGGC
ATATAATTTCGAGATGGCCGACCAACGACCCTCTCCCCTCGCCTGTGTAC
CCTGTCGTCGTCGCCATGTCAAATGCGACGCTCGCATGCCCATCTGCACC
CGTTGTCGCAATAGCAACAGTGACTGTCACTATGTTCGTTCACGGCGCGG
CTTACGGAACAGATCTAGTCCTGATCCACCCCCGGGCGATGTCGATCTCC
TCCCAGACTTTACCACCTGGCTAAACAACACCATTGACTTAGATAAGCCT
AATCTACCTCCACCACCCACATTCCACTATCCGCCTCGCCTCCTACCACT
CCGCCACCACCCTCGCTTCCTCCTCCTCAACATCATCCTGCACCCGTCTC
CGCACCCTCCAATCCTTACCCTTATCCGCGCACATCCCCCACCACGACTC
TCCCGCCTCTAACACCCACTCCCACAAACTCCTCCGCGCCGCAGATCTCC
TCTCGAACCTTGCTACGCTCCCTAGCACGGTCCTCTCCCGAACGCCGTTC
TTCACCTGCGCTCTTGCCATCGCTGCGGTGGTCCATGTAGCCTCCTTGAC
GGGCGGACCTCCGTCTTCTCTGGCGATCAAGTACGAGGGCGAGACGGGAG
CTGGGAAGGAACAGTCACTGAAAGCGAGGATTGAGTTAGGGGTAGGAGCG
CTGCAGGTTCTTGGACGGGCGTGGCCGCTTGCTAGGAGGGTTAGGGGGGA
GATGGTCGATATGTATCGCGGGAGGTGTTGACAACTCAAACCCCCCAAAC
CATCCGCCACCCTCTCAACCCTCCTAGATCTCGACCTCCACCACATCTCC
CCCTTCACCTACCGCATCCTCGCAACGCAAGAACTCCGCGCCGTCCTCCA
AGTCACACAATGCCTCGACCCCGACACCGAACTTCAAACCGAAACATTAG
ACGCCCGTCTCGCCACCTCTTTAATGAGACTTCCCTCATCCCTACCAGAA
CACGACACTGCAACCGTCGACGAAATGGTCTTTCAAACACTAATGATAAC
ATACCTCCAGAGCTACTCGGCCTCGACCCCAGCATCGATGTCAATGGCGA
TGTTCACTCCGATCCCATCCCGGACTTTCCTCCGTCACCACCAGCATACA
CTCCCACAGTCGCGGAGTCTGAGCCCCTTGCCCATGATGCCATGATTCAG
CTCTATTACCATCACTTTCATCGCTCGCATCCCATCCTCCTGCCCCGGCG
CAGTCTTGCTTCGTCGCTATGCCAGCACATCCCATCGTACATCACGCATA
TCATGCGTTACATCGGCAGCCACTACTATCCCCAGCCAGGATTCAGCGAT
ACCTTCCAAGCGCCCGCCTACACGGCCCTTTCCGCCCCAAACGACGGATT
CAAGGTCCAGGGGTTACTTCTTCTCGCTATCATTGAGCACTCCTACGGAC
ATGAAGAGACGGCCCGTAAGCTCCTCAAAGATGCGATTCAATTAGCATGC
CACCTCGACATGATCAACCCCTCTTTCGCACGTAGCCACTCTCGCGGCAG
TCCTGTCCTCGAAGAAAGTTGGCGACGCACCTACTGGGAACTCGTCGTTG
TGGAAGGGCTCGTGTCCGCTTTTGGCGGCGGGCCCATCCTGCCCAGTTAC
AAATGGATCAACGACGAAATGCAGCTTCCCTGCGACGAAAAGGCATATAA
TTTCGAGATGGCCGACCAACGACCCTCTCCCCTCGCCTGTGTACCCTGTC
GTCGTCGCCATGTCAAATGCGACGCTCGCATGCCCATCTGCACCCGTTGT
CGCAATAGCAACAGTGACTGTCACTATGTTCGTTCACGGCGCGGCTTACG
GAACAGATCTAGTCCTGATCCACCCCCGGGCGATGTCGATCTCCTCCCAG
ACTTTACCACCTGGCTAAACAACACCATTGACTTAGATAAGCCTAATCTA
CCTCCACCACCCACATTCCACTATCCGCCTCGCCTCCTACCACTCCGCCA
CCACCCTCGCTTCCTCCTCCTCAACATCATCCTGCACCCGTCTCCGCACC
CTCCAATCCTTACCCTTATCCGCGCACATCCCCCACCACGACTCTCCCGC
CTCTAACACCCACTCCCACAAACTCCTCCGCGCCGCAGATCTCCTCTCGA
ACCTTGCTACGCTCCCTAGCACGGTCCTCTCCCGAACGCCGTTCTTCACC
TGCGCTCTTGCCATCGCTGCGGTGGTCCATGTAGCCTCCTTGACGGGCGG
ACCTCCGTCTTCTCTGGCGATCAAGTACGAGGGCGAGACGGGAGCTGGGA
AGGAACAGTCACTGAAAGCGAGGATTGAGTTAGGGGTAGGAGCGCTGCAG
GTTCTTGGACGGGCGTGGCCGCTTGCTAGGAGGGTTAGGGGGGAGATGGT
CGATATGTATCGCGGGAGGTGTTGACAACTCAAACCCCCCAAACCATCCG
CCACCCTCTCAACCCTCCTAGATCTCGACCTCCACCACATCTCCCCCTTC
ACCTACCGCATCCTCGCAACGCAAGAACTCCGCGCCGTCCTCCAAGTCAC
ACAATGCCTCGACCCCGACACCGAACTTCAAACCGAAACATTAGACGCCC
GTCTCGCCACCTCTTTAATGAGACTTCCCTCATCCCTACCAGAACACGAC
ACTGCAACCGTCGACGAAATGGTCTTTCAAACACTAATGATAACATACCT
CCAGAGCTACTCGGCCTCGACCCCAGCATCGATGTCAATGGCGATGTTCA
CTCCGATCCCATCCCGGACTTTCCTCCGTCACCACCAGCATACACTCCCA
CAGTCGCGGAGTCTGAGCCCCTTGCCCATGATGCCATGATTCAGCTCTAT
TACCATCACTTTCATCGCTCGCATCCCATCCTCCTGCCCCGGCGCAGTCT
TGCTTCGTCGCTATGCCAGCACATCCCATCGTACATCACGCATATCATGC
GTTACATCGGCAGCCACTACTATCCCCAGCCAGGATTCAGCGATACCTTC
CAAGCGCCCGCCTACACGGCCCTTTCCGCCCCAAACGACGGATTCAAGGT
CCAGGGGTTACTTCTTCTCGCTATCATTGAGCACTCCTACGGACATGAAG
AGACGGCCCGTAAGCTCCTCAAAGATGCGATTCAATTAGCATGCCACCTC
GACATGATCAACCCCTCTTTCGCACGTAGCCACTCTCGCGGCAGTCCTGT
CCTCGAAGAAAGTTGGCGACGCACCTACTGGGAACTCGTCGTTGTGGAAG
GGCTCGTGTCCGCTTTTGGCGGCGGGCCCATCCTGCCCAGTTACAAATGG
ATCAACGACGAAATGCAGCTTCCCTGCGACGAAAAGGCATATAATTTCGA
GATGGCCGACCAACGACCCTCTCCCCTCGCCTGTGTACCCTGTCGTCGTC
GCCATGTCAAATGCGACGCTCGCATGCCCATCTGCACCCGTTGTCGCAAT
AGCAACAGTGACTGTCACTATGTTCGTTCACGGCGCGGCTTACGGAACAG
ATCTAGTCCTGATCCACCCCCGGGCGATGTCGATCTCCTCCCAGACTTTA
CCACCTGGCTAAACAACACCATTGACTTAGATAAGCCTAATCTACCTCCA
CCACCCACATTCCACTATCCGCCTCGCCTCCTACCACTCCGCCACCACCC
TCGCTTCCTCCTCCTCAACATCATCCTGCACCCGTCTCCGCACCCTCCAA
TCCTTACCCTTATCCGCGCACATCCCCCACCACGACTCTCCCGCCTCTAA
CACCCACTCCCACAAACTCCTCCGCGCCGCAGATCTCCTCTCGAACCTTG
CTACGCTCCCTAGCACGGTCCTCTCCCGAACGCCGTTCTTCACCTGCGCT
CTTGCCATCGCTGCGGTGGTCCATGTAGCCTCCTTGACGGGCGGACCTCC
GTCTTCTCTGGCGATCAAGTACGAGGGCGAGACGGGAGCTGGGAAGGAAC
AGTCACTGAAAGCGAGGATTGAGTTAGGGGTAGGAGCGCTGCAGGTTCTT
GGACGGGCGTGGCCGCTTGCTAGGAGGGTTAGGGGGGAGATGGTCGATAT
GTATCGCGGGAGGTGTTGACAACTCAAACCCCCCAAACCATCCGCCACCC
TCTCAACCCTCCTAGATCTCGACCTCCACCACATCTCCCCCTTCACCTAC
CGCATCCTCGCAACGCAAGAACTCCGCGCCGTCCTCCAAGTCACACAATG
CCTCGACCCCGACACCGAACTTCAAACCGAAACATTAGACGCCCGTCTCG
CCACCTCTTTAATGAGACTTCCCTCATCCCTACCAGAACACGACACTGCA
ACCGTCGACGAAATGGTCTTTCAAACACTAATGATAACATACCTCCAGAG
CTACTCGGCCTCGACCCCAGCATCGATGTCAATGGCGATGTTCACTCCGA
TCCCATCCCGGACTTTCCTCCGTCACCACCAGCATACACTCCCACAGTCG
CGGAGTCTGAGCCCCTTGCCCATGATGCCATGATTCAGCTCTATTACCAT
CACTTTCATCGCTCGCATCCCATCCTCCTGCCCCGGCGCAGTCTTGCTTC
GTCGCTATGCCAGCACATCCCATCGTACATCACGCATATCATGCGTTACA
TCGGCAGCCACTACTATCCCCAGCCAGGATTCAGCGATACCTTCCAAGCG
CCCGCCTACACGGCCCTTTCCGCCCCAAACGACGGATTCAAGGTCCAGGG
GTTACTTCTTCTCGCTATCATTGAGCACTCCTACGGACATGAAGAGACGG
CCCGTAAGCTCCTCAAAGATGCGATTCAATTAGCATGCCACCTCGACATG
ATCAACCCCTCTTTCGCACGTAGCCACTCTCGCGGCAGTCCTGTCCTCGA
AGAAAGTTGGCGACGCACCTACTGGGAACTCGTCGTTGTGGAAGGGCTCG
TGTCCGCTTTTGGCGGCGGGCCCATCCTGCCCAGTTACAAATGGATCAAC
GACGAAATGCAGCTTCCCTGCGACGAAAAGGCATATAATTTCGAGATGGC
CGACCAACGACCCTCTCCCCTCGCCTGTGTACCCTGTCGTCGTCGCCATG
TCAAATGCGACGCTCGCATGCCCATCTGCACCCGTTGTCGCAATAGCAAC
AGTGACTGTCACTATGTTCGTTCACGGCGCGGCTTACGGAACAGATCTAG
TCCTGATCCACCCCCGGGCGATGTCGATCTCCTCCCAGACTTTACCACCT
GGCTAAACAACACCATTGACTTAGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | C6 transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851902.1 | supercontig | KZ851902.1:480377..482584 - |
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