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M747DRAFT_120620-T1, M747DRAFT_120620-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_120620-T1
Unique NameM747DRAFT_120620-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851940.1:116998..118583+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_120620-T1 ID=M747DRAFT_120620-T1|Name=M747DRAFT_120620-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1586bp|location=Sequence derived from alignment at KZ851940.1:116998..118583+ (Aspergillus niger ATCC 13496)
TTTTTGCGGTCCAGGCGAGCATCTGGCGCCGACGAAGATTTTCGATCTAC
AGATTGTTGATTGACCACGGGGATTTCGCAGAGTCTCCAGTACAGCTACA
ATGGCGTCAACGTCTCAACCCCCTCTCCGGTTCACTTCCCACAAGAACTT
TGTGTACCGTCTCGTCTTCGCTACGTTGACCGGCCGCACGATTCAGATCT
CCCAGATTCGTCCTTCGTCGCCTACGAATCCCGGTCTCGCTCCTCATGAA
ATCTCGTTCCTTCGTCTTCTGGAGTCCATTACCAATGGCTCCCAGATGGA
GATCTCGTACACCGGTACTATCCTTGTTTATAAGCCCGGCCTCATTACAG
GCAGTTCGCCAGGTGTGGCCACGAGCAGCGGAGGCGTCATCCGGCACGAG
CTCCCAGCAGGGTGCAATCGTGGCGTGAGTTATTATCTGCTGCCGCTCTG
CCTTTTGGCACCCTTTTCCAAGGCTCCCATCAAGGTCCTCTTTACTGGTC
CAGGTGTGATTACCTCGTCCACCCCGACTGGTGACATGTCCGTGGACAGT
GTGCGAACCGCCATTCTCCCTCTCTACAACCAATTTGGAATCTTTAACAA
CATCGAGCTGCGTATCCTACGGCGATCGAACCCTGGACCCAATGGCAGAG
GCGGTGGTGGAGAAGTCCAGCTAGTATTTGGCCACCAGCTCCGGCTGCCG
AAGACCCTGCACCTCATGAACGCCGGTCGCATCAAGAAGGTCCGCGGTGT
GGCCTACTCTGTCGGTGTTTCCGCATCCAATAACGCACGAATGATCGAAA
CCGCCCGTGGTGTTTTGAACCCACTCGTCCCTGACACCTATGTCTTCTCT
GATGTGTCGTCGGCGCCGCTCGTACCTGCTCCCGAGAAGAGCAACCCTTC
CGCGAAAAAGAAGATTGGCCTTGGATTTGGACTCTCGTTGGTTGCAGAGT
CATCTACTGGCTGCCTGTTCTCCGCCGATGTGGCGTCGCCTCCCGCAGGC
GGCGAGGCGCCTGAAGACATTGGGAAGCGATGTGCTTACCAGCTACTTGA
GGCCGTTTCGAAGGGAGGTTGCGTTGCCCCTGCAGCTGTTCCGACCATGC
TGGGTCTGATGACGATGGGATCGGAGGATGTTGGACGAATCCAGGTTGGT
CGGGAGGTGATCGCCGAGGAGAGCACCATCCAGCTGGCCAGGGACCTGAC
CAAGTTCGGTGCTCCGGGTTGGGGTCTGAGAGACGCGAGTGGTGAGAATG
AGAATGGGGATGTGATCATCAGCGTGGTTGGCCGCGGCATTGGCAACGTT
GGCCGTAAGGTTGCTTGATTGTGAAGACCCAACATCAGCCTCACATCAAC
TCCGCGGTCGGCTGTTTCAGGTATTACCGACCTTTTTCTGGTCGGTGGTC
TGTCCAGTGGAGCTTCAAGGGCCCTGTCACAGCGTTGTTTCAGAGTATGG
CCAGTTTGCATCTGATTGCCCAATGTGAGCGCCGGGTACTGCCCCTGGCG
ACAGCGGTGTATCACGTAGGCGCAAGGGAAGGGCAAGGTTTCAACTCCAC
TGAGGGGAAGACCGCAGACCACGTCATTTCTAATAA
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Coding sequence (CDS) from alignment at KZ851940.1:116998..118583+

>M747DRAFT_120620-T1 ID=M747DRAFT_120620-T1|Name=M747DRAFT_120620-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1218bp|location=Sequence derived from alignment at KZ851940.1:116998..118583+ (Aspergillus niger ATCC 13496)
ATGGCGTCAACGTCTCAACCCCCTCTCCGGTTCACTTCCCACAAGAACTT
TGTGTACCGTCTCGTCTTCGCTACGTTGACCGGCCGCACGATTCAGATCT
CCCAGATTCGTCCTTCGTCGCCTACGAATCCCGGTCTCGCTCCTCATGAA
ATCTCGTTCCTTCGTCTTCTGGAGTCCATTACCAATGGCTCCCAGATGGA
GATCTCGTACACCGGTACTATCCTTGTTTATAAGCCCGGCCTCATTACAG
GCAGTTCGCCAGGTGTGGCCACGAGCAGCGGAGGCGTCATCCGGCACGAG
CTCCCAGCAGGGTGCAATCGTGGCGTGAGTTATTATCTGCTGCCGCTCTG
CCTTTTGGCACCCTTTTCCAAGGCTCCCATCAAGGTCCTCTTTACTGGTC
CAGGTGTGATTACCTCGTCCACCCCGACTGGTGACATGTCCGTGGACAGT
GTGCGAACCGCCATTCTCCCTCTCTACAACCAATTTGGAATCTTTAACAA
CATCGAGCTGCGTATCCTACGGCGATCGAACCCTGGACCCAATGGCAGAG
GCGGTGGTGGAGAAGTCCAGCTAGTATTTGGCCACCAGCTCCGGCTGCCG
AAGACCCTGCACCTCATGAACGCCGGTCGCATCAAGAAGGTCCGCGGTGT
GGCCTACTCTGTCGGTGTTTCCGCATCCAATAACGCACGAATGATCGAAA
CCGCCCGTGGTGTTTTGAACCCACTCGTCCCTGACACCTATGTCTTCTCT
GATGTGTCGTCGGCGCCGCTCGTACCTGCTCCCGAGAAGAGCAACCCTTC
CGCGAAAAAGAAGATTGGCCTTGGATTTGGACTCTCGTTGGTTGCAGAGT
CATCTACTGGCTGCCTGTTCTCCGCCGATGTGGCGTCGCCTCCCGCAGGC
GGCGAGGCGCCTGAAGACATTGGGAAGCGATGTGCTTACCAGCTACTTGA
GGCCGTTTCGAAGGGAGGTTGCGTTGCCCCTGCAGCTGTTCCGACCATGC
TGGGTCTGATGACGATGGGATCGGAGGATGTTGGACGAATCCAGGTTGGT
CGGGAGGTGATCGCCGAGGAGAGCACCATCCAGCTGGCCAGGGACCTGAC
CAAGTTCGGTGCTCCGGGTTGGGGTCTGAGAGACGCGAGTGGTGAGAATG
AGAATGGGGATGTGATCATCAGCGTGGTTGGCCGCGGCATTGGCAACGTT
GGCCGTAAGGTTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_120620M747DRAFT_120620Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_120620-T1.utr5p1M747DRAFT_120620-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_120620-T1.exon1M747DRAFT_120620-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_120620-T1.cdsM747DRAFT_120620-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_120620-T1.utr3p1M747DRAFT_120620-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_120620-T1M747DRAFT_120620-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926307V
DBxrefInterPro:IPR013792
DBxrefInterPro:IPR013791
DBxrefInterPro:IPR037136
DBxrefInterPro:IPR036553
DBxrefInterPro:IPR023797
DBxrefInterPro:IPR016443
DBxrefPFAM:PF05189
DBxrefPFAM:PF01137
Product18S rRNA biogenesis protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851940.1supercontigKZ851940.1:116998..118583 +
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