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M747DRAFT_121959-T1, M747DRAFT_121959-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_121959-T1
Unique NameM747DRAFT_121959-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851941.1:115729..117751-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_121959-T1 ID=M747DRAFT_121959-T1|Name=M747DRAFT_121959-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2023bp|location=Sequence derived from alignment at KZ851941.1:115729..117751- (Aspergillus niger ATCC 13496)
GCGCGTTGCTTTTCTTATTCACATCACCCCATAATAATACAAACCTGATA
CACCTTGATGCAACCGCGTTTGGGTCCAGAAGAGAAAGAAAAGACTTGAT
TGTCGGATACTCTGGGGACTTGTGGGGTCGAGGAAGTGGGGTCTGGGACA
TGGAGGCCGGGGATTGGAGAGAGGGACAATAATGGTACGGAGTACAATAA
TCCGCAGACAACCTTCCCGGCTAAACAGGCATTATTATATAGAGGGCATT
GGGGTCGTCTGACTATTTTTCTTCCACCCTGACCACACATAATCCTTTTA
TCATATTGATTCGACAAACTCGAAATGGGCGATAATTATGAGGAAAAGCC
TGACGCCATTGGCAAAGAGTTCAGCGATGAACTCACGCCCGAGGAGCGTG
AGCACGAGATCGAGGCACGCGATCTGCAAAGCAATCAGTATCTCGACAAC
GAACCATTGTATGACCGGATAGCGTTCGCGCAGATACCAGTGCACATGAG
GAGCCCTCGCATGCTAGTCATCACACTGGGCGTGTTCGCGGCGTTCAGCG
GCATGCTGAGTGGGTTAGACCAGTCGGTGATCTCGGGCGCCCTGCCTGGT
ATCCGCAAGCATTTCATCGCGTCAGGCGAGTGGGCGAGCATGGACGACCC
GAAACTGGCGACCGACATTTCACTGATTTCGTCACTGATGCCGCTGGGCG
CCATGGCCGGCGCGCTCATCATGACGCCGCTGAACTTCTACTTTGGACGC
CGCAACTCGATTATCATCTCGTGTTTGTGGTACACACTGGGCAGTGGACT
TTGTGCGGGCTCCCGTAGTGTGGGGATGCTGTTTGCGGGCCGCTTCATTC
TGGGCATCGGTATCGGAATCGAAGGCGGCTGTGTCGGTATCTACATCTCC
GAGTGTGTGCCGCCAGAGGTGCGTGGCAACCTGGTGTCGGTATACCAGCT
GATGATCGCATTCGGAGAGATCATCGGATACGCCGCCGGCGGCGTATTCT
TTGACGTCCCGTCAGGCAGCTGGCGCTGGATGCTGGGCTCGTCTCTCTTG
TTTTCGACGATCCTCCTGGTTGGGATGGCCTTCCTGCCAGAATCACCGCG
CTGGCTGGCATCCAAGGGCAAGTACGGGCGCGCGTGGCGGGTGTGGAAGT
CGCTGCGCGACATGGCCGACCCCAAAAGCCTGGACGAGTACCTTGCGATG
GAAGTTACAGTCAAACATGATGTCGACCAGTCCGCGAACGTGAAATGGCA
TCAGAGGTATCTGGAGGTGTGCAGGACGCCGCGCAACCGACGGGCGCTTG
TATATGCCACGGCTATGATATTTTTCGGGCAGATGACGGGCATCAATGCG
GTCATGTACAATATGTCAAACTTGATGGCCAAGATGAACTTTGATGACCG
CGAGTCAGTGCTGATGTCGATGGTGGGCGGTGGCGCGTTGTTCCTGGGAA
CAATTCCTGCTGTGTTCACGATGGACAAGTTTGGGCGCCGGGTGTGGGCG
CAAAACATCCTGATGTTCATCGTGGGTCTGGCGCTGGTGGGCGTCGGCTA
CCTATACACGAACAATGGTGTTGATTATTTCAATGAGCATAAGGCAACGG
CCTTGGGGTTGTTTTTCTCCGGTCTGGTGCTGTACATGGCGTTCTTCGGG
GCATATTCGTGCCTGACCTGGGTAGTGCCAGCGGAGAGCTTTAGTTTCAA
CACCCGCAGCCAGGGCATGGCGATCTGCTCTGTATTCCTTTATCTGTGGT
CATTCATTGTGACATACAACTTCGAAGGGATGCAGAAAGCGATGACCTAC
ACCGGCCTGACAATCGGTTTCTTCGGCGGCTTGGCCGCGCTAGGCTTCTT
TTACCAGCTGTTCTTTATGCCCGAGACCAAAGACAAAACATTGGAGGAGA
TCGACGAGTTGTTTCTAATGCCGACAAGTAAGCTGGTTGCGCTGAACACA
AGCAATCTGCTTAAGCCCCTCCGGCGGCGACACCGGCCAGAGCCGGTCGA
TAACTACAACGCCTAAATAGTTG
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Coding sequence (CDS) from alignment at KZ851941.1:115729..117751-

>M747DRAFT_121959-T1 ID=M747DRAFT_121959-T1|Name=M747DRAFT_121959-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1692bp|location=Sequence derived from alignment at KZ851941.1:115729..117751- (Aspergillus niger ATCC 13496)
ATGGGCGATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAG
CGATGAACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATC
TGCAAAGCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCG
TTCGCGCAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCAC
ACTGGGCGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGT
CGGTGATCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCA
GGCGAGTGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACT
GATTTCGTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGA
CGCCGCTGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGT
TTGTGGTACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGG
GATGCTGTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAG
GCGGCTGTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGT
GGCAACCTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCAT
CGGATACGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGC
GCTGGATGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGG
ATGGCCTTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTA
CGGGCGCGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCA
AAAGCCTGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTC
GACCAGTCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAG
GACGCCGCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTT
TCGGGCAGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTG
ATGGCCAAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGT
GGGCGGTGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGG
ACAAGTTTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTG
GGTCTGGCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGA
TTATTTCAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTC
TGGTGCTGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTA
GTGCCAGCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGAT
CTGCTCTGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCG
AAGGGATGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTC
GGCGGCTTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGA
GACCAAAGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGA
CAAGTAAGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGG
CGGCGACACCGGCCAGAGCCGGTCGATAACTACAACGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_121959M747DRAFT_121959Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_121959-T1M747DRAFT_121959-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_121959-T1.cdsM747DRAFT_121959-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_121959-T1.utr3p1M747DRAFT_121959-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_121959-T1.exon2M747DRAFT_121959-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_121959-T1.exon1M747DRAFT_121959-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_121959-T1.utr5p2M747DRAFT_121959-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_121959-T1.utr5p1M747DRAFT_121959-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Productgeneral substrate transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851941.1supercontigKZ851941.1:115729..117751 -
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