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M747DRAFT_125246-T1, M747DRAFT_125246-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_125246-T1
Unique NameM747DRAFT_125246-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851943.1:217396..218247-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_125246-T1 ID=M747DRAFT_125246-T1|Name=M747DRAFT_125246-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=852bp|location=Sequence derived from alignment at KZ851943.1:217396..218247- (Aspergillus niger ATCC 13496)
CACTTCTAGTGGGGAAACACTAGTGGCTATAGAAGTCATCGAATATCAAC
CGCGACAACCAGTGAATGGAGCTTGCCGCGCCGGGGTGAGCTTGTCTTGG
CAACCTCCAACTGGTCGCGCGGTCTATCTGAATAGCTCCGACTCGTTGCA
ACCTACACACCACCAACGTCTTTCTTTACTCTCAAGGCTCAGTCACCGAC
CTTTTCGGTTCTCTGGTTTGTTCAAGAGCATCTCCGTCGCATCATGGAAC
AGCCACCCCCCGCCGATCAACCACAACAGCCTCCGCCTCCGACACTCACA
AATCCTCGCTTCACCCTCGAGCTAGAGTTTGTGTCTTCTCTCGCCAATCC
CTACTATCTGTCCCACCTCGCCGTGACATATCCGAACCTGCTGGGCATAA
ACAAGTCTGGTGATGACAGCGACGTGAACAATGATTCCACAGACCCCGAC
GCGCAGGGATTTGCAGCGTACCTGGCCTACCTCTATTCCTACTGGAAGAC
CCCCGAATACGCCCAGTTTCTGACCCATCCTGGTGCCACTTTGCGGGCGC
TACGACTACTGCAGGAGGAGACCTTCCGTCGCGACATTATTCGTCCCGAT
GTCATTGAAAGGCTAGCAGGGACCGATATTGCCGCCGAACCCGTCGACCC
AGCTGCGGAGTCTGGAGACCAGGAGGGCGAGCAAGCCAAAGCAAGCTAGG
AAGGCATGCGGTTACACTAGATACAGCAGGAAACAGACGCGCTGTATATT
GACCTCGGTGTGGATTGGCTCGGTGGTCTGTCCGGGATGATGTCCTGCTT
GAGCCACCGTCTTCTTTTACCACTAGGCTGCGGAGAGGGGGGTATATGGA
GA
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Coding sequence (CDS) from alignment at KZ851943.1:217396..218247-

>M747DRAFT_125246-T1 ID=M747DRAFT_125246-T1|Name=M747DRAFT_125246-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=456bp|location=Sequence derived from alignment at KZ851943.1:217396..218247- (Aspergillus niger ATCC 13496)
ATGGAACAGCCACCCCCCGCCGATCAACCACAACAGCCTCCGCCTCCGAC
ACTCACAAATCCTCGCTTCACCCTCGAGCTAGAGTTTGTGTCTTCTCTCG
CCAATCCCTACTATCTGTCCCACCTCGCCGTGACATATCCGAACCTGCTG
GGCATAAACAAGTCTGGTGATGACAGCGACGTGAACAATGATTCCACAGA
CCCCGACGCGCAGGGATTTGCAGCGTACCTGGCCTACCTCTATTCCTACT
GGAAGACCCCCGAATACGCCCAGTTTCTGACCCATCCTGGTGCCACTTTG
CGGGCGCTACGACTACTGCAGGAGGAGACCTTCCGTCGCGACATTATTCG
TCCCGATGTCATTGAAAGGCTAGCAGGGACCGATATTGCCGCCGAACCCG
TCGACCCAGCTGCGGAGTCTGGAGACCAGGAGGGCGAGCAAGCCAAAGCA
AGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SOH1M747DRAFT_125246Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_125246-T1.cdsM747DRAFT_125246-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_125246-T1.utr3p1M747DRAFT_125246-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_125246-T1.exon1M747DRAFT_125246-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_125246-T1.utr5p1M747DRAFT_125246-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_125246-T1M747DRAFT_125246-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265KF9
DBxrefInterPro:IPR008831
DBxrefInterPro:IPR038089
DBxrefPFAM:PF05669
Productsuppressor of hpr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851943.1supercontigKZ851943.1:217396..218247 -
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