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M747DRAFT_126590-T1, M747DRAFT_126590-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_126590-T1
Unique NameM747DRAFT_126590-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:231059..231704+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_126590-T1 ID=M747DRAFT_126590-T1|Name=M747DRAFT_126590-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=646bp|location=Sequence derived from alignment at KZ851944.1:231059..231704+ (Aspergillus niger ATCC 13496)
TCTAGCCGTACCTCATTATTTGTTCATCCGTCCATTCCATGGCTGCAGAT
TCCGGGCAGCGCTCCAGTGGGAGTCCTCGTTTACGATCGCATCATATGGG
GAACAATAACAAGACCGTCGTAGCTTGTGACCAGTGCCACCGCCATAAGC
TCAAATGCTCGCCGCGATCCCAAGGATGCGCCCGCTGTCACCGTACGCCT
CCACTTCCCGCTGCCTCAGCCGGCCATTTCTGAACAACCCCCAGGACTAG
GGATACAGTGCACATCCAGCCGCCCGATCAAGAAACGGGGAAGGCGACCG
ACTAGGCAATCTCTCCCACAGATATCTCTTCCACTATCAGAACATCACTT
GTCGGTGCGGCCCGTGACACCCACCCCGGCTTGTGCGTGGATGTGCTGAA
CCCATTGCAGTATGCACCTGATTATCCTGTACTGGACTGCCTTTGCGATC
TGCAGGTTTTGACATCCGAACAGGTCACGCCCAGGTAAATCTCTAACTTC
CATCGATTTCTAAGCCTGTCACACTCACCATGTGCAATAGCGCTTCCCCG
CTTCAACTCTCGCGTTTTGAGGCCTGTCGTCTGTTAGAGCACTTCTATGC
TTCACCCAACAGAGAATTCCATGCCTTACTCATCCGAAAAGGCAGA
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Coding sequence (CDS) from alignment at KZ851944.1:231059..231704+

>M747DRAFT_126590-T1 ID=M747DRAFT_126590-T1|Name=M747DRAFT_126590-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=936bp|location=Sequence derived from alignment at KZ851944.1:231059..231704+ (Aspergillus niger ATCC 13496)
ATGGCTGCAGATTCCGGGCAGCGCTCCAGTGGGAGTCCTCGTTTACGATC
GCATCATATGGGGAACAATAACAAGACCGTCGTAGCTTGTGACCAGTGCC
ACCGCCATAAGCTCAAATGCTCGCCGCGATCCCAAGGATGCGCCCGCTGT
CACCGACTAGGGATACAGTGCACATCCAGCCGCCCGATCAAGAAACGGGG
AAGGCGACCGACTAGGCAATCTCTCCCACAGATATCTCTTCCACTATCAG
AACATCACTTTATGCACCTGATTATCCTGTACTGGACTGCCTTTGCGATC
TGCAGGTTTTGAATGGCTGCAGATTCCGGGCAGCGCTCCAGTGGGAGTCC
TCGTTTACGATCGCATCATATGGGGAACAATAACAAGACCGTCGTAGCTT
GTGACCAGTGCCACCGCCATAAGCTCAAATGCTCGCCGCGATCCCAAGGA
TGCGCCCGCTGTCACCGACTAGGGATACAGTGCACATCCAGCCGCCCGAT
CAAGAAACGGGGAAGGCGACCGACTAGGCAATCTCTCCCACAGATATCTC
TTCCACTATCAGAACATCACTTTATGCACCTGATTATCCTGTACTGGACT
GCCTTTGCGATCTGCAGGTTTTGAATGGCTGCAGATTCCGGGCAGCGCTC
CAGTGGGAGTCCTCGTTTACGATCGCATCATATGGGGAACAATAACAAGA
CCGTCGTAGCTTGTGACCAGTGCCACCGCCATAAGCTCAAATGCTCGCCG
CGATCCCAAGGATGCGCCCGCTGTCACCGACTAGGGATACAGTGCACATC
CAGCCGCCCGATCAAGAAACGGGGAAGGCGACCGACTAGGCAATCTCTCC
CACAGATATCTCTTCCACTATCAGAACATCACTTTATGCACCTGATTATC
CTGTACTGGACTGCCTTTGCGATCTGCAGGTTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_126590M747DRAFT_126590Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_126590-T1M747DRAFT_126590-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_126590-T1.utr5p1M747DRAFT_126590-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_126590-T1.exon1M747DRAFT_126590-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_126590-T1.exon2M747DRAFT_126590-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_126590-T1.exon3M747DRAFT_126590-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_126590-T1.exon4M747DRAFT_126590-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_126590-T1.cdsM747DRAFT_126590-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_126590-T1.utr3p1M747DRAFT_126590-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR
M747DRAFT_126590-T1.utr3p2M747DRAFT_126590-T1.utr3p2Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:231059..231704 +
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