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M747DRAFT_130430-T1, M747DRAFT_130430-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_130430-T1
Unique NameM747DRAFT_130430-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851947.1:37949..39517+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_130430-T1 ID=M747DRAFT_130430-T1|Name=M747DRAFT_130430-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1569bp|location=Sequence derived from alignment at KZ851947.1:37949..39517+ (Aspergillus niger ATCC 13496)
TGGATCCTTGTCACTGATCTATCCCGATCAGATCCCCTCTTGCTGGACGC
TGGCCCATCGTTTCAGTCATTCATGTCACTTCTGCTATACTAGCACTACT
CTTTTCTGTGAACTTTTGAGGACTATTCTCCTCGCGCCACTCCTTTTCTG
CAGATATCTTGATTTCAGCATCCATGAAGAGCATCACAATGCTGCCATCC
CTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGTTCCACT
GGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGTCCTTCTCTA
AGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTTGCTCATGAC
CCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTACAAAGGTGGTGT
GCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGG
TCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGAAACAGAACCGCTCT
CGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCGTTTCTACTGCTT
CTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGCCATTGGAGTCGCCT
CTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGCGCTGTCGTC
AACACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTCGGTATCCAA
TGCGATAGACGGCGCATTCATCACCGATCAACAGACCGGACAGTCTCACC
TGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGGTGCCATTGGCTGAT
GATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAACGCGACCAACCTGGC
CTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCATGACTT
ACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAATGTTGTCAC
TTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTACGTGCACATGAT
CTTCTATTCGAGAACTTGGTAGCTAACATTTACAACAGGTACAACATCCG
GGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGGATAAGGATGGCC
ATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGCTCCAACCATGGA
ATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAACAATGGCAGCGA
AGCCGATGTCTTGTATTACCATTATCGTACGTTTACAGTCCACTGTTGTG
GGGAAGTCAGCTAACAGAGCTTGCAGTCAACACTACGTCTGGTTTCGCAC
AGGGAGTGAGTCTAGCCTTAACTATCCATTGACAGGATGATACTAACGCA
ATACAGGACGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGATG
GCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAAATAACGCTCAG
GCACTAAAGGTGGAAACATCAGTAAATCTAGCATAAACGCTACATCAAAC
GAAAGCAGTGGTCGGATTCTTCAACCGAACCACTCGCTTAATTCACTAGC
GCTTCTGTGTATGTGCTGT
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Coding sequence (CDS) from alignment at KZ851947.1:37949..39517+

>M747DRAFT_130430-T1 ID=M747DRAFT_130430-T1|Name=M747DRAFT_130430-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4464bp|location=Sequence derived from alignment at KZ851947.1:37949..39517+ (Aspergillus niger ATCC 13496)
ATGAAGAGCATCACAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCT
GCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCG
CCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCC
AACCTGGGCAACATCGTTGCTCATGACCCTAATGTCATTCAGCATGATGG
CTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCC
GCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCC
AGCGTGATCCCGAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCAT
TCAGCACGACAACCGTTTCTACTGCTTCTACGCGATCAGCGAGAACGGCA
GTCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGA
AACTGGACGGACCATGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTC
GGACATCTATCCTTACTCGGTATCCAATGCGATAGACGGCGCATTCATCA
CCGATCAACAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGCAT
GGTATTTTCTCGGTGCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCC
GAAGACCCCAAACGCGACCAACCTGGCCTACATCCCAGATGCCAAGTCCA
AGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTACCTG
TGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTCCGCC
CATGGGAGACGAGTACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAG
GTCCTTTCGTGGATAAGGATGGCCATGATACCCTCAAGGGCGGTGGTACC
ATCGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGG
CGTGTTGATCAACAATGGCAGCGAAGCCGATGTCTTGTATTACCATTATC
TCAACACTACGTCTGGTTTCGCACAGGGAGACGCGCACTTGGGATGGAAC
TATCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAA
TGCCAACGGCAAATAAATGAAGAGCATCACAATGCTGCCATCCCTGCTTT
CCGTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCC
CGGGCGAGTGCACTCGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAA
AGATTATCCCCTTCCCAACCTGGGCAACATCGTTGCTCATGACCCTAATG
TCATTCAGCATGATGGCTATTTCTACTTGTACAAAGGTGGTGTGCACATT
CCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGAC
CGTCCTGGACGACTCCAGCGTGATCCCGAAACAGAACCGCTCTCGTCCTT
GGGCCCCTACGACCATTCAGCACGACAACCGTTTCTACTGCTTCTACGCG
ATCAGCGAGAACGGCAGTCGCGACAGCGCCATTGGAGTCGCCTCTTCGGA
TACTCCCGTCGGTGGAAACTGGACGGACCATGGCGCTGTCGTCAACACCG
GCAAGGGAGACCTGTCGGACATCTATCCTTACTCGGTATCCAATGCGATA
GACGGCGCATTCATCACCGATCAACAGACCGGACAGTCTCACCTGCTTTA
CGGGAGCTATTGGCATGGTATTTTCTCGGTGCCATTGGCTGATGATCTCC
TTTCCGTCAAAACCCCGAAGACCCCAAACGCGACCAACCTGGCCTACATC
CCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGC
GCCTTACTACTACCTGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATA
TTCACGCTTTTCCGCCCATGGGAGACGAGTACAACATCCGGGTCGGTAGA
TCTAAGAGTGCGACAGGTCCTTTCGTGGATAAGGATGGCCATGATACCCT
CAAGGGCGGTGGTACCATCGTCTACGGCTCCAACCATGGAATTGTCTATG
CCCCTGGTGGAGTGGGCGTGTTGATCAACAATGGCAGCGAAGCCGATGTC
TTGTATTACCATTATCTCAACACTACGTCTGGTTTCGCACAGGGAGACGC
GCACTTGGGATGGAACTATCTGCACTATGTAAATGGATGGCCAGTGGCTG
TCGAGGGGTATGTGAATGCCAACGGCAAATAAATGAAGAGCATCACAATG
CTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGC
TGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGT
CCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTT
GCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTACAA
AGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTT
GGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGAAACAG
AACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCGTTT
CTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGCCATTG
GAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGC
GCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTC
GGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGACCGGAC
AGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGGTGCCA
TTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAACGCGAC
CAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTT
TCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAA
TGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTACAA
CATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGGATAAGG
ATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGCTCCAAC
CATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAACAATGG
CAGCGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACGTCTGGTT
TCGCACAGGGAGACGCGCACTTGGGATGGAACTATCTGCACTATGTAAAT
GGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAAATAAAT
GAAGAGCATCACAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGC
TCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCC
GGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAA
CCTGGGCAACATCGTTGCTCATGACCCTAATGTCATTCAGCATGATGGCT
ATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGC
TCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAG
CGTGATCCCGAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTC
AGCACGACAACCGTTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGT
CGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAA
CTGGACGGACCATGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGG
ACATCTATCCTTACTCGGTATCCAATGCGATAGACGGCGCATTCATCACC
GATCAACAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGG
TATTTTCTCGGTGCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGA
AGACCCCAAACGCGACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAG
CCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTACCTGTG
GTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCA
TGGGAGACGAGTACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGT
CCTTTCGTGGATAAGGATGGCCATGATACCCTCAAGGGCGGTGGTACCAT
CGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCG
TGTTGATCAACAATGGCAGCGAAGCCGATGTCTTGTATTACCATTATCTC
AACACTACGTCTGGTTTCGCACAGGGAGACGCGCACTTGGGATGGAACTA
TCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATG
CCAACGGCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_130430M747DRAFT_130430Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_130430-T1M747DRAFT_130430-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_130430-T1.utr5p1M747DRAFT_130430-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_130430-T1.exon1M747DRAFT_130430-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_130430-T1.exon2M747DRAFT_130430-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_130430-T1.exon3M747DRAFT_130430-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_130430-T1.exon4M747DRAFT_130430-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_130430-T1.cdsM747DRAFT_130430-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_130430-T1.utr3p1M747DRAFT_130430-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
NoteCAZy:GH43_30
NoteCAZy:GH43_7
NoteCAZy:GH43_8
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR016840
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Product5-alpha-L-arabinosidase D
Productarabinan endo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851947.1supercontigKZ851947.1:37949..39517 +
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