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M747DRAFT_133927-T1, M747DRAFT_133927-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_133927-T1
Unique NameM747DRAFT_133927-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:359236..362205-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_133927-T1 ID=M747DRAFT_133927-T1|Name=M747DRAFT_133927-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2970bp|location=Sequence derived from alignment at KZ851903.1:359236..362205- (Aspergillus niger ATCC 13496)
CTTCCTCTTCGCTCTCTCTCGACAAAACCTGTCCATCCGCAGGATCGGGG
TTCGGCGTTTTTGCTTCGATTAGGGTGATAACGGTGTTATTGCGGCTATC
GCTATCTCGAGAATCATACTTGCGGAACGGCTGGCGGTCTGGCTTCATTA
TGACTGCCTAGGACTGGATTATTGCGACCACCTGTGCTAGTCGCTGCCAC
GAATCGTCCTGGCTAGCTGTCCGACTGTCTACACATTCTCCGCATACCTC
TCCGTCCTCCCCGAAATACTGTTGAGAACTCTGTTCATCCTAGAGCCTCG
GATCTCGAAACCGCAATTCCGTCATGGCTACCGCATTCCCTGATGAAATC
AGGGCTTCGCCCGAAGCGGCCTCGCCGGCGAGCCCGGCGTCTTCAACTGG
CCAGATTCCTTTGGAACAGCCGCCCAAACTCAAGGGGCGTCACAAGTTGC
TACAGAGCCTGCAGCGCATCTCGTCAAGCCCGAGTCTGACCAGACGGGGC
CGGTCCCATTCTACGGGATACCGTCGTGACAACAAGGCCTCTTTGTCCTG
TGTCTCCCTCTCCCAGTCCGCATATACTCCTTGCCTGGGTAATGGAAGTA
CCTCTCAACTCTATGGCGGATTGAACGCCCGTCCAATCACCCCCGGTGCT
GCTGCCTTTCCAGTAGACCATGACGGAAATCCTCGAATCCGCCTTGTCGG
TTCCGACTCACCCAATGCGCGGACAGTTCCATTGCCTACCGATCTGCGAC
CAGGATCTCGTGGGTCCCCGTTGGGATCGGATGCAGCCGATCAACCTGCC
ACGGCGCGGTCGTCCCCGAAGCCAAAGAAGGTCTTTGATTTCTGGGGCAA
TATGCCCGATGAGCTGAAGATGCGCATTTTCCAGTACCTCACCCCGAAGG
AGATTGTCCGTTGCGCTGCTGTTTCGAAGGCATGGAACAAAATGTGTTAT
GATGGACAGTTGTGGACCGAAGTCGACACGACAGACTACTACCGCGATAT
CCCTAGCGATGGTCTTGTGAAGCTGATTACCGCCGGTGGGCCATTCGTTC
GCGATCTCAATCTCCGGGGCTGTGTCCAACTGAAGGATAAGTGGAAGACT
GAAGGCGATCGCATCACCGACTTGTGCCGGAACGTCGTCAATTTCTCACT
GGAAGGATGTCGCATCGACACTCAATCGATCAACTGCTTTCTCTTGCGCA
ATCCCCGACTGGAATATATTAACTTGTCCGGATTATCGTCTGTCAGTGAC
TCTGCCATGACGATTATCGCACAGTCCTGCCCTCAACTTCAGATCTTGAA
TGTATCTTGGTGCACCGGCGTTCACACCGCGGGGCTCAAGAAGATTGTGA
GCGCCTGTAACAACTTGAAGGATCTCCGAGCAAGTGAAATCCGTGGGTTC
GACGACGTCGAATTCGCCCTACAACTATTCGAGCGGAATACCCTGGAACG
CCTGATCATGAGCCGCACGGAGCTTACAGACGAGTGTCTGAAGGCACTTG
TGCATGGGCTTGACCCCGAAATGGACCTTCTTGAGGAACGAGCGCTTGTC
CCTCCGCGACGACTGAAACACTTGGACATCCACCAGTGCACCGAATTGAC
AGATGACGGTGTTAAGTGGCTTGCCCACAATGTTCCGGACCTGGAAGGCC
TGCAACTCTCACAATGCTCTGAGCTCAGCGACGAATCCGTTATGGCGGTG
ATCCGGACCACTCCTCGTCTGACACACCTCGACCTGGAGGACATGGAGAG
GCTTTCCAACCATACGCTTCTCGAGCTTGCCAAGTCCCCGTGTGCTGCGC
GCCTGCAACACCTCAACATCAGCTATTGTGAAAGCATTGGCGACATTGGA
ACCTTGCAGATCATGAAGAATTGCCCTGCCCTCCGTTCCGTTGAAATGGA
CAACACCCGGGTGTCCGACCTGACCCTGATGGAGGCCAGCTTCCGCGTGC
GCAAACGTGGCTACGATGAGAACCTTCCCAAAATTGGCCTCCGTCTGGTT
GTATTTGACTGCGCCAATGTCACCTGGGCCGGTGTAAGAGAAGTCCTCTC
AAGCAATGCCTACCTCCCGCGTGCTACCCGCAAATCCATGCAAGCAGTCT
CGGTTGTCACCCACACGGTAGATCCTAATCAGTCCACAACTGTGATTGCT
TCCTCTATTACACCTCCCCCGCCGCCACCCGTATACCCCAATGAAATTAT
CCATCTGAAGTGCTTCTATGGCTGGCAGCCGACTGTGGATGAACACAACA
AGCGAGTTCTCCGTGGTGATCTTATGGCTGCGAGCAGGCTGGATCGGAAG
TGGGCCGAGTACATGATGGCAACCGAAGAAGCGGGTGCTCCAGGATCCGG
GGTGAGAAGAAGACGGCGTCGAGCCCGTGAAGCCGAGAGAATCTATAACG
AAGACGACGAAGATGCAGCTTTCGGTGTCGGAGCTGTCACTACACTTGGG
GCAGGAAGACGGCGACACACTGAAGGCGGCGGCACAGGAGGCTGCAGTGT
CATGTAAGGTGACTACTCGTCTGTTGGTCGATCTTGCGAAAGAAAGTGTG
TTTGGAGCGATGCACTCGTTTCAATGTTTTGATTTACTAGGTTCTGGAAA
CCTTGTTCCCGCATGTACCGGCGTTCGTCTCGCCCTGTTGGGGTAGAGGA
TAGCTGGAACCGCGTGCTGGGATTTGCAAGCATCGCTCTGCTGTGAGCAT
GCTATGAGATATGACATGATGATTTCGCGACAAGTGCCAGTCACTTAGTC
GGCCCAGAGAGCATCGGGAGTGTTGACTGCTCTGAGAATCTTTGGGTCAC
CACTGCGCATCTTTCGGGTGTTCTGGCGAGCTGAACTGCCACACGATCGA
CGTGTATTTCTCGTTCATCTACTGTACTTAGAAGGATGGCGAAGCCGGAG
TTGGTGAAAGCATCCACAAACAATCTTTTAGACTCGAACTGGTTCTTAGC
ATCTAGCCTTTGTCGTTCTA
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Coding sequence (CDS) from alignment at KZ851903.1:359236..362205-

>M747DRAFT_133927-T1 ID=M747DRAFT_133927-T1|Name=M747DRAFT_133927-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2184bp|location=Sequence derived from alignment at KZ851903.1:359236..362205- (Aspergillus niger ATCC 13496)
ATGGCTACCGCATTCCCTGATGAAATCAGGGCTTCGCCCGAAGCGGCCTC
GCCGGCGAGCCCGGCGTCTTCAACTGGCCAGATTCCTTTGGAACAGCCGC
CCAAACTCAAGGGGCGTCACAAGTTGCTACAGAGCCTGCAGCGCATCTCG
TCAAGCCCGAGTCTGACCAGACGGGGCCGGTCCCATTCTACGGGATACCG
TCGTGACAACAAGGCCTCTTTGTCCTGTGTCTCCCTCTCCCAGTCCGCAT
ATACTCCTTGCCTGGGTAATGGAAGTACCTCTCAACTCTATGGCGGATTG
AACGCCCGTCCAATCACCCCCGGTGCTGCTGCCTTTCCAGTAGACCATGA
CGGAAATCCTCGAATCCGCCTTGTCGGTTCCGACTCACCCAATGCGCGGA
CAGTTCCATTGCCTACCGATCTGCGACCAGGATCTCGTGGGTCCCCGTTG
GGATCGGATGCAGCCGATCAACCTGCCACGGCGCGGTCGTCCCCGAAGCC
AAAGAAGGTCTTTGATTTCTGGGGCAATATGCCCGATGAGCTGAAGATGC
GCATTTTCCAGTACCTCACCCCGAAGGAGATTGTCCGTTGCGCTGCTGTT
TCGAAGGCATGGAACAAAATGTGTTATGATGGACAGTTGTGGACCGAAGT
CGACACGACAGACTACTACCGCGATATCCCTAGCGATGGTCTTGTGAAGC
TGATTACCGCCGGTGGGCCATTCGTTCGCGATCTCAATCTCCGGGGCTGT
GTCCAACTGAAGGATAAGTGGAAGACTGAAGGCGATCGCATCACCGACTT
GTGCCGGAACGTCGTCAATTTCTCACTGGAAGGATGTCGCATCGACACTC
AATCGATCAACTGCTTTCTCTTGCGCAATCCCCGACTGGAATATATTAAC
TTGTCCGGATTATCGTCTGTCAGTGACTCTGCCATGACGATTATCGCACA
GTCCTGCCCTCAACTTCAGATCTTGAATGTATCTTGGTGCACCGGCGTTC
ACACCGCGGGGCTCAAGAAGATTGTGAGCGCCTGTAACAACTTGAAGGAT
CTCCGAGCAAGTGAAATCCGTGGGTTCGACGACGTCGAATTCGCCCTACA
ACTATTCGAGCGGAATACCCTGGAACGCCTGATCATGAGCCGCACGGAGC
TTACAGACGAGTGTCTGAAGGCACTTGTGCATGGGCTTGACCCCGAAATG
GACCTTCTTGAGGAACGAGCGCTTGTCCCTCCGCGACGACTGAAACACTT
GGACATCCACCAGTGCACCGAATTGACAGATGACGGTGTTAAGTGGCTTG
CCCACAATGTTCCGGACCTGGAAGGCCTGCAACTCTCACAATGCTCTGAG
CTCAGCGACGAATCCGTTATGGCGGTGATCCGGACCACTCCTCGTCTGAC
ACACCTCGACCTGGAGGACATGGAGAGGCTTTCCAACCATACGCTTCTCG
AGCTTGCCAAGTCCCCGTGTGCTGCGCGCCTGCAACACCTCAACATCAGC
TATTGTGAAAGCATTGGCGACATTGGAACCTTGCAGATCATGAAGAATTG
CCCTGCCCTCCGTTCCGTTGAAATGGACAACACCCGGGTGTCCGACCTGA
CCCTGATGGAGGCCAGCTTCCGCGTGCGCAAACGTGGCTACGATGAGAAC
CTTCCCAAAATTGGCCTCCGTCTGGTTGTATTTGACTGCGCCAATGTCAC
CTGGGCCGGTGTAAGAGAAGTCCTCTCAAGCAATGCCTACCTCCCGCGTG
CTACCCGCAAATCCATGCAAGCAGTCTCGGTTGTCACCCACACGGTAGAT
CCTAATCAGTCCACAACTGTGATTGCTTCCTCTATTACACCTCCCCCGCC
GCCACCCGTATACCCCAATGAAATTATCCATCTGAAGTGCTTCTATGGCT
GGCAGCCGACTGTGGATGAACACAACAAGCGAGTTCTCCGTGGTGATCTT
ATGGCTGCGAGCAGGCTGGATCGGAAGTGGGCCGAGTACATGATGGCAAC
CGAAGAAGCGGGTGCTCCAGGATCCGGGGTGAGAAGAAGACGGCGTCGAG
CCCGTGAAGCCGAGAGAATCTATAACGAAGACGACGAAGATGCAGCTTTC
GGTGTCGGAGCTGTCACTACACTTGGGGCAGGAAGACGGCGACACACTGA
AGGCGGCGGCACAGGAGGCTGCAGTGTCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_133927M747DRAFT_133927Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_133927-T1.cdsM747DRAFT_133927-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_133927-T1.utr3p1M747DRAFT_133927-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_133927-T1.exon1M747DRAFT_133927-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_133927-T1.utr5p1M747DRAFT_133927-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_133927-T1M747DRAFT_133927-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR006553
DBxrefInterPro:IPR001810
DBxrefPFAM:PF13516
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductF-box domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:359236..362205 -
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