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M747DRAFT_140258-T1, M747DRAFT_140258-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_140258-T1
Unique NameM747DRAFT_140258-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851948.1:187400..189025+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_140258-T1 ID=M747DRAFT_140258-T1|Name=M747DRAFT_140258-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1626bp|location=Sequence derived from alignment at KZ851948.1:187400..189025+ (Aspergillus niger ATCC 13496)
TACAACAACATCTCTGCCTTGTCTGGTTATATCTTCACGGAGCTCGGAGA
ACAGCTCTGTTAGCCTAATGAATGAATGCGTATCTTCTCAATAGGGCTTT
AGGGTCCATAAGTCCCTCGACCTTTCATGCCGCACAAACCACACGGCTTG
TTCAACAGCTCGAGCCGGCGCCTGGCATTCGCTTCTCAGCACGTAGAGAC
ATATTCTCAGGAGAAAGTCAGGCTGGAAATGAATATCCTCATGAGGATGC
AGGATTGGTCTTTGATGATGAAGTATTCGCTCATAAGGCGGGAGTGAATG
TGCTCGCCATCGATCACTATGAGGGCCGATTGTATGTTACACCCATCCTG
TGCCTGGCTCCAATTAACGGTAGACAGCATGGTTTCTGGGGGTGCAGATC
CTTCGATTAATCTCTGGGATCTGGAGACACGGGGCTCGGATCTGAAACAT
GTGCACCAGCCTGTGGCATCAGTCAACAGAGCCTCGCATGAAGATGCCCA
CACACGTGCCATTACCTCCGTCTCTATATACCCATTTGATCCCACCCCGT
CTACTATTTTGACAACCTCGTACGATGGCACACTCAAGCTTTCGGCTTTA
GGGCCGGGGGCGATCACACCTGTGCACACTTTCAACCTAGATTGCACCCC
GTACACCCATTCGTTGTCGTCAAATCCAGGGTCTCCTTTACTCATTGCAG
TAGGTACCTCAGAGAAGCCGGTCCGATTGCTTGACCTACGTTCAGGCTTG
TCGACGCATGGTCTCCCCGGGCATGAATCTTCAGTCCTGTCCGTATCATG
GGCTCCTCATCAGCCACACATATTGGCTTCTGCGTCGGCAGATAATAGAG
TAATTCTCTTCGATATCCGCCGAGGAGGCCACAATTCAGCCATCGCTGCA
CTAGACATGGATGATGCTGTCGGACTTGTACGCCCGGGATCCATCCCAGC
ATCCTACCAGAGCCGCCCAGCATTCTCACCGCACGCTCGAGCCCATAATG
GCGCTGTGACCGGCGTGCGGTGGACGTCCAGTGGTAGTCACCTGGTGACC
GCTGGCCAGGACTCTCGGATTCGGGTCTGGGATGCCGGGACAGGTGCGAA
TACGCTTGTGCACTTCGGTCAGCGCGTGCGGAACAGTGTAACTTCGCACC
TGGCCGAAAGGGCACCGCTAATTATACCTCGCGGAATGGTCATTCCAGGG
CAAGAAACCCTTTTATGGCCGAATTTCAATGAGAGAGACGACCGCGGGGA
GATCTTCATGTTTGAACTTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCG
TACCGGGACTTATGACCGGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCC
CTCAGCGCTGCGAGGATCAACGCCCTTGCTTGGCGCGGCAACGGTTCCTC
AGGAGAAGGGATCGAGATGTATTCAGCCCACGGCGACGGGACCATTCGCA
CATGGGCCTCACGGGAACCCGAGGGTGAGCCGGATGATGAAGCCGCCGAA
GCCGAACGAGCAGACCGCAAGCGCAAGCGCGACATTCTCGACGAACTCTA
CCGAGGATTTATAGGCTAAGCATACGATCAAGAAAATCTACGAAGGCACC
AAATATAGCACAATAGTAAAAATCGT
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Coding sequence (CDS) from alignment at KZ851948.1:187400..189025+

>M747DRAFT_140258-T1 ID=M747DRAFT_140258-T1|Name=M747DRAFT_140258-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2904bp|location=Sequence derived from alignment at KZ851948.1:187400..189025+ (Aspergillus niger ATCC 13496)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGG
GATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGC
ATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCT
CCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACC
TCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCAC
ACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGT
CGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAG
CCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCC
CGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCAC
ACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATC
CGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGC
TGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCC
CAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTG
CGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCG
GATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCG
GTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCG
CTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATG
GCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAAC
TTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACC
GGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGAT
CAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGA
TGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAA
CCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCG
CAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCT
AAATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCG
ACCTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGC
GCCTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTC
AGGCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGAT
GAAGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTA
TGAGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCT
GGGATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTG
GCATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTAC
CTCCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAA
CCTCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATC
ACACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTT
GTCGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGA
AGCCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTC
CCCGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCC
ACACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATA
TCCGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGAT
GCTGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCG
CCCAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCG
TGCGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCT
CGGATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTT
CGGTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCAC
CGCTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTA
TGGCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGA
ACTTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGA
CCGGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGG
ATCAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGA
GATGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGG
AACCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGAC
CGCAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGG
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_140258M747DRAFT_140258Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_140258-T1.utr5p1M747DRAFT_140258-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_140258-T1.exon1M747DRAFT_140258-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_140258-T1.exon2M747DRAFT_140258-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_140258-T1.cdsM747DRAFT_140258-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_140258-T1.utr3p1M747DRAFT_140258-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_140258-T1M747DRAFT_140258-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductWD repeat protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851948.1supercontigKZ851948.1:187400..189025 +
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