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M747DRAFT_143982-T1, M747DRAFT_143982-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_143982-T1
Unique NameM747DRAFT_143982-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851951.1:212565..214120+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_143982-T1 ID=M747DRAFT_143982-T1|Name=M747DRAFT_143982-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1556bp|location=Sequence derived from alignment at KZ851951.1:212565..214120+ (Aspergillus niger ATCC 13496)
GGCTTACCGAGCGAAAGTTATCTACTGGCTACTCCAGACTGGCTATCAAT
TCCGTCCTATCTTATCCCGTACTATCTAGTAGGTTGGAATCCAGCGTTAT
ACCCGACTGAGTTTAGTAAGGCTGAACGTAAAAAGAGAATCTCTCCCCGT
GCTGCGCACCAAGAAGCTTACGGAGTACTCAGCATCATTATCATACGATT
ATCTCACCATAGGCCGACCGAGCACAGGTTGGTACATCCTTTCTATTTCT
CAAGGCGAGTTTCCGTTCTATTTTGGGCGCCATCTTCCAGCAGTTGATTT
TTTTTGGGAGCATGACTCCTACAGACCTCTAAAGTCCACCGGCATCGATC
GACCGAACGAATATTCACTTAACGTCTCAAGTGCCGGCAAAAGCGACATT
CCTCTGCTGTATCCATGTCACAGCCATGGGATTATATTGCTAAACTTGTC
TGCATTGGGGACTCGGGGACTGGGAAGTCCAGTGTGGGTACACTCAAGCT
TGACAGACCATCTTACTGCTGACACACGGCTGCGACTTTCTAGTTGACGG
TCCGACTTTGCGAAGGGCGCTTTTCGTCCTCCCATGATGTTACAATCGGT
GTCGAGTTCGGTTCGCGGATTGTTCCGGTGGGCCCGCCAGCTTCAAAGGC
CTTGGGAGGCGAGTTCGACGGTTCTATCCGCAATCGTGCCCCTTCAATTA
CACCTTCGCCCTTATTGCCCGCTACGGCTACAACCAGCGAATCAGTCGCT
TCTGGACTGCCCAGTCCTCCACGTAGGGTACAAGAGCTCCAGAAAAGAAT
GAAGTTGTCGCTATGGGACACCGCTGGCCAAGAAACGTACAAATCTATTA
CCCGCTCTTATTTCCGTGGTGCTTCGGGTGCCCTCCTGGTCTTCGATATT
ACTAGGCCTTCTACATTTGTATCGTGCACACAGTGGCTTCATGATCTGCG
GCAAATTGCAGAAGACGGCATCGTAATTGTTCTGGTCGGCAACAAGAGTG
ATCTTGCCGGTGATGACTCGAGATCGCATCAGACGGTCACTAGGCAAGAA
GCGGAGGAGTGGTGCCGTTTGAATAACATCACACGGTATGTTGAGACAAG
CGCAAAATCTGGAGAGAACGTGGAGCGTGCTTTTCTTGAGGTGGCTGAGA
TGATATATCGCAACATCGAAGCTGGCAAATATGACCTCTACGACCGTCGA
AGTGGTGTGAAGGGCTATGGTGCCACCGGCGGATCAAACCCGGGTATCCC
AAACACTGTCACTTTAGGCTTGGATGATGCCATGCGCAAGGGTGGAAGTG
GCCTGGGAGGAGGCTGTTGTTGATACATACAGAATATTATACCTTCTATC
GAGCTTATTGTTCAAAGGTGGAACGGAACCATATCTTGTGCGAACATGTA
ACAGTCCTTATAGTCGCCCTTGCGGAAGTATGGTTCTATGAAAATATAGA
ATAGCCTCGGATTTCGCCCATAAATCTCTAGGTGACCTTAGATCATATAC
ATCTCGAATTAATGAGAATCAAGGCAGTTGGTACAGAAGTATGAAGCAAT
AAATAC
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Coding sequence (CDS) from alignment at KZ851951.1:212565..214120+

>M747DRAFT_143982-T1 ID=M747DRAFT_143982-T1|Name=M747DRAFT_143982-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1698bp|location=Sequence derived from alignment at KZ851951.1:212565..214120+ (Aspergillus niger ATCC 13496)
ATGTCACAGCCATGGGATTATATTGCTAAACTTGTCTGCATTGGGGACTC
GGGGACTGGGAAGTCCAGTTTGACGGTCCGACTTTGCGAAGGGCGCTTTT
CGTCCTCCCATGATGTTACAATCGGTGTCGAGTTCGGTTCGCGGATTGTT
CCGGTGGGCCCGCCAGCTTCAAAGGCCTTGGGAGGCGAGTTCGACGGTTC
TATCCGCAATCGTGCCCCTTCAATTACACCTTCGCCCTTATTGCCCGCTA
CGGCTACAACCAGCGAATCAGTCGCTTCTGGACTGCCCAGTCCTCCACGT
AGGGTACAAGAGCTCCAGAAAAGAATGAAGTTGTCGCTATGGGACACCGC
TGGCCAAGAAACGTACAAATCTATTACCCGCTCTTATTTCCGTGGTGCTT
CGGGTGCCCTCCTGGTCTTCGATATTACTAGGCCTTCTACATTTGTATCG
TGCACACAGTGGCTTCATGATCTGCGGCAAATTGCAGAAGACGGCATCGT
AATTGTTCTGGTCGGCAACAAGAGTGATCTTGCCGGTGATGACTCGAGAT
CGCATCAGACGGTCACTAGGCAAGAAGCGGAGGAGTGGTGCCGTTTGAAT
AACATCACACGGTATGTTGAGACAAGCGCAAAATCTGGAGAGAACGTGGA
GCGTGCTTTTCTTGAGGTGGCTGAGATGATATATCGCAACATCGAAGCTG
GCAAATATGACCTCTACGACCGTCGAAGTGGTGTGAAGGGCTATGGTGCC
ACCGGCGGATCAAACCCGGGTATCCCAAACACTGTCACTTTAGGCTTGGA
TGATGCCATGCGCAAGGGTGGAAGTGGCCTGGGAGGAGGCTGTTGTTGAA
TGTCACAGCCATGGGATTATATTGCTAAACTTGTCTGCATTGGGGACTCG
GGGACTGGGAAGTCCAGTTTGACGGTCCGACTTTGCGAAGGGCGCTTTTC
GTCCTCCCATGATGTTACAATCGGTGTCGAGTTCGGTTCGCGGATTGTTC
CGGTGGGCCCGCCAGCTTCAAAGGCCTTGGGAGGCGAGTTCGACGGTTCT
ATCCGCAATCGTGCCCCTTCAATTACACCTTCGCCCTTATTGCCCGCTAC
GGCTACAACCAGCGAATCAGTCGCTTCTGGACTGCCCAGTCCTCCACGTA
GGGTACAAGAGCTCCAGAAAAGAATGAAGTTGTCGCTATGGGACACCGCT
GGCCAAGAAACGTACAAATCTATTACCCGCTCTTATTTCCGTGGTGCTTC
GGGTGCCCTCCTGGTCTTCGATATTACTAGGCCTTCTACATTTGTATCGT
GCACACAGTGGCTTCATGATCTGCGGCAAATTGCAGAAGACGGCATCGTA
ATTGTTCTGGTCGGCAACAAGAGTGATCTTGCCGGTGATGACTCGAGATC
GCATCAGACGGTCACTAGGCAAGAAGCGGAGGAGTGGTGCCGTTTGAATA
ACATCACACGGTATGTTGAGACAAGCGCAAAATCTGGAGAGAACGTGGAG
CGTGCTTTTCTTGAGGTGGCTGAGATGATATATCGCAACATCGAAGCTGG
CAAATATGACCTCTACGACCGTCGAAGTGGTGTGAAGGGCTATGGTGCCA
CCGGCGGATCAAACCCGGGTATCCCAAACACTGTCACTTTAGGCTTGGAT
GATGCCATGCGCAAGGGTGGAAGTGGCCTGGGAGGAGGCTGTTGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_143982M747DRAFT_143982Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_143982-T1M747DRAFT_143982-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_143982-T1.utr5p1M747DRAFT_143982-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_143982-T1.utr5p2M747DRAFT_143982-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_143982-T1.utr5p3M747DRAFT_143982-T1.utr5p3Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_143982-T1.exon1M747DRAFT_143982-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_143982-T1.exon2M747DRAFT_143982-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_143982-T1.exon3M747DRAFT_143982-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_143982-T1.exon4M747DRAFT_143982-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_143982-T1.cdsM747DRAFT_143982-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_143982-T1.utr3p1M747DRAFT_143982-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF00009
DBxrefPFAM:PF00025
Productsecretion related GTPase srgD
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851951.1supercontigKZ851951.1:212565..214120 +
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